EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000053931 (Gene tree)
Gene ID: 71994
Gene Symbol: Cnn3
Alias: 1600014M03Rik|Calpo3
Full Name: calponin 3%2C acidic
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 31711
Position: chr3: 121426497-121458207
Accession: 1919244
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000196671	-	1053	-	-	- (aa)	-	-
ENSMUST00000198649	-	395	-	-	- (aa)	-	-
ENSMUST00000199499	-	261	-	ENSMUSP00000143159	50 (aa)	-	A0A0G2JFG3
ENSMUST00000197135	-	1242	-	ENSMUSP00000142526	284 (aa)	-	A0A0G2JDV8
ENSMUST00000198393	-	836	-	ENSMUSP00000143186	139 (aa)	-	A0A0G2JFI6
ENSMUST00000199188	-	2214	-	-	- (aa)	-	-
ENSMUST00000198620	-	481	-	ENSMUSP00000143122	49 (aa)	-	A0A0G2JFC8
ENSMUST00000029773	-	2049	-	ENSMUSP00000029773	330 (aa)	-	Q9DAW9

Gene Model

Click here to download ENSMUSG00000053931's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000053931's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000053931	Cnn3	100	100.000	ENSG00000117519	CNN3	100	98.378	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003779	actin binding	-	IEA	Function
GO:0005515	protein binding	11591653.	IPI	Function
GO:0005516	calmodulin binding	-	IEA	Function
GO:0005829	cytosol	-	ISO	Component
GO:0008017	microtubule binding	-	ISO	Function
GO:0014069	postsynaptic density	-	ISO	Component
GO:0015629	actin cytoskeleton	-	ISO	Component
GO:0030425	dendrite	-	ISO	Component
GO:0031032	actomyosin structure organization	-	IEA	Process
GO:0032780	negative regulation of ATPase activity	-	ISO	Process
GO:0043025	neuronal cell body	-	ISO	Component
GO:0043197	dendritic spine	-	ISO	Component