EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000054003 (Gene tree)
Gene ID: 74691
Gene Symbol: Tdrd9
Alias: 4930441E05Rik
Full Name: tudor domain containing 9
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 97296 bases
Position: chr12:111971559-112068854
Accession: 1921941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000078022	TUDOR	PF00567.24	8.8e-15	1	1
ENSMUSP00000078022	DEAD	PF00270.29	1.5e-07	1	1
ENSMUSP00000078022	HA2	PF04408.23	3.1e-13	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000192125	-	3681	-	ENSMUSP00000142236	217 (aa)	-	A0A0A6YY15
ENSMUST00000193630	-	484	-	-	- (aa)	-	-
ENSMUST00000079009	-	4809	XM_006516316	ENSMUSP00000078022	1383 (aa)	XP_006516379	Q14BI7
ENSMUST00000191808	-	3366	-	ENSMUSP00000141719	540 (aa)	-	A0A0A6YWV8
ENSMUST00000194800	-	799	-	-	- (aa)	-	-
ENSMUST00000193586	-	456	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000054003's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000054003's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000054003	Tdrd9	95	33.843	ENSMUSG00000032480	Dhx30	51	32.248
ENSMUSG00000054003	Tdrd9	99	34.079	ENSMUSG00000027770	Dhx36	57	34.171
ENSMUSG00000054003	Tdrd9	88	30.081	ENSMUSG00000029169	Dhx15	71	30.081
ENSMUSG00000054003	Tdrd9	95	32.448	ENSMUSG00000040620	Dhx33	77	31.000
ENSMUSG00000054003	Tdrd9	89	31.417	ENSMUSG00000018425	Dhx40	58	31.417

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000054003	Tdrd9	97	91.651	ENSG00000156414	TDRD9	99	87.973	Homo_sapiens
ENSMUSG00000054003	Tdrd9	97	68.053	ENSAPOG00000015220	tdrd9	97	56.240	Acanthochromis_polyacanthus
ENSMUSG00000054003	Tdrd9	97	92.410	ENSAMEG00000018095	TDRD9	99	86.797	Ailuropoda_melanoleuca
ENSMUSG00000054003	Tdrd9	88	69.118	ENSACIG00000024299	tdrd9	99	53.140	Amphilophus_citrinellus
ENSMUSG00000054003	Tdrd9	97	68.173	ENSAOCG00000007386	tdrd9	98	55.110	Amphiprion_ocellaris
ENSMUSG00000054003	Tdrd9	97	67.797	ENSAPEG00000023023	tdrd9	97	55.162	Amphiprion_percula
ENSMUSG00000054003	Tdrd9	97	67.681	ENSATEG00000015827	tdrd9	97	57.624	Anabas_testudineus
ENSMUSG00000054003	Tdrd9	91	74.949	ENSAPLG00000007429	TDRD9	99	65.517	Anas_platyrhynchos
ENSMUSG00000054003	Tdrd9	97	75.379	ENSACAG00000010862	TDRD9	99	64.528	Anolis_carolinensis
ENSMUSG00000054003	Tdrd9	97	87.287	ENSANAG00000020949	TDRD9	99	85.342	Aotus_nancymaae
ENSMUSG00000054003	Tdrd9	97	62.949	ENSACLG00000020660	tdrd9	94	55.687	Astatotilapia_calliptera
ENSMUSG00000054003	Tdrd9	87	66.949	ENSAMXG00000021360	tdrd9	93	57.313	Astyanax_mexicanus
ENSMUSG00000054003	Tdrd9	97	84.630	ENSBTAG00000020402	TDRD9	99	80.766	Bos_taurus
ENSMUSG00000054003	Tdrd9	97	90.892	ENSCJAG00000017235	TDRD9	99	85.157	Callithrix_jacchus
ENSMUSG00000054003	Tdrd9	78	91.232	ENSCAFG00000018311	TDRD9	99	87.846	Canis_familiaris
ENSMUSG00000054003	Tdrd9	97	91.461	ENSCAFG00020008631	TDRD9	99	87.050	Canis_lupus_dingo
ENSMUSG00000054003	Tdrd9	97	91.271	ENSCHIG00000011541	TDRD9	99	82.863	Capra_hircus
ENSMUSG00000054003	Tdrd9	97	92.030	ENSTSYG00000003253	TDRD9	99	87.973	Carlito_syrichta
ENSMUSG00000054003	Tdrd9	100	77.794	ENSCAPG00000009518	TDRD9	100	77.794	Cavia_aperea
ENSMUSG00000054003	Tdrd9	97	92.030	ENSCPOG00000002760	TDRD9	100	84.754	Cavia_porcellus
ENSMUSG00000054003	Tdrd9	97	91.651	ENSCCAG00000022528	TDRD9	99	86.758	Cebus_capucinus
ENSMUSG00000054003	Tdrd9	97	91.461	ENSCATG00000032905	TDRD9	99	85.962	Cercocebus_atys
ENSMUSG00000054003	Tdrd9	97	91.651	ENSCLAG00000006616	TDRD9	100	84.971	Chinchilla_lanigera
ENSMUSG00000054003	Tdrd9	97	91.651	ENSCSAG00000009835	TDRD9	99	86.035	Chlorocebus_sabaeus
ENSMUSG00000054003	Tdrd9	60	76.562	ENSCHOG00000002226	-	90	76.562	Choloepus_hoffmanni
ENSMUSG00000054003	Tdrd9	95	79.337	ENSCPBG00000020203	TDRD9	99	70.748	Chrysemys_picta_bellii
ENSMUSG00000054003	Tdrd9	97	51.423	ENSCING00000019779	-	99	38.936	Ciona_intestinalis
ENSMUSG00000054003	Tdrd9	97	50.379	ENSCSAVG00000002146	-	100	38.389	Ciona_savignyi
ENSMUSG00000054003	Tdrd9	97	91.082	ENSCANG00000031870	TDRD9	99	86.697	Colobus_angolensis_palliatus
ENSMUSG00000054003	Tdrd9	100	94.661	ENSCGRG00001023336	Tdrd9	100	94.661	Cricetulus_griseus_chok1gshd
ENSMUSG00000054003	Tdrd9	100	94.661	ENSCGRG00000004013	Tdrd9	100	94.661	Cricetulus_griseus_crigri
ENSMUSG00000054003	Tdrd9	97	67.108	ENSCSEG00000001411	tdrd9	97	55.294	Cynoglossus_semilaevis
ENSMUSG00000054003	Tdrd9	97	55.303	ENSCVAG00000007427	tdrd9	99	49.802	Cyprinodon_variegatus
ENSMUSG00000054003	Tdrd9	97	67.486	ENSDARG00000013453	tdrd9	99	53.381	Danio_rerio
ENSMUSG00000054003	Tdrd9	97	95.256	ENSDORG00000015167	Tdrd9	100	86.065	Dipodomys_ordii
ENSMUSG00000054003	Tdrd9	96	44.528	FBgn0003483	spn-E	86	33.176	Drosophila_melanogaster
ENSMUSG00000054003	Tdrd9	74	86.967	ENSETEG00000015130	TDRD9	89	81.582	Echinops_telfairi
ENSMUSG00000054003	Tdrd9	97	56.274	ENSEBUG00000010711	tdrd9	96	45.462	Eptatretus_burgeri
ENSMUSG00000054003	Tdrd9	95	92.773	ENSEASG00005004203	TDRD9	99	85.973	Equus_asinus_asinus
ENSMUSG00000054003	Tdrd9	95	92.188	ENSECAG00000023843	TDRD9	99	85.611	Equus_caballus
ENSMUSG00000054003	Tdrd9	64	74.493	ENSEEUG00000003134	-	84	71.429	Erinaceus_europaeus
ENSMUSG00000054003	Tdrd9	97	67.985	ENSELUG00000010798	tdrd9	97	57.616	Esox_lucius
ENSMUSG00000054003	Tdrd9	97	91.271	ENSFCAG00000013807	TDRD9	99	85.249	Felis_catus
ENSMUSG00000054003	Tdrd9	97	67.871	ENSFALG00000002911	TDRD9	99	60.734	Ficedula_albicollis
ENSMUSG00000054003	Tdrd9	97	92.979	ENSFDAG00000004582	TDRD9	100	84.942	Fukomys_damarensis
ENSMUSG00000054003	Tdrd9	93	66.339	ENSFHEG00000008883	tdrd9	99	57.857	Fundulus_heteroclitus
ENSMUSG00000054003	Tdrd9	91	65.235	ENSGMOG00000010725	tdrd9	99	51.681	Gadus_morhua
ENSMUSG00000054003	Tdrd9	71	63.472	ENSGALG00000011565	TDRD9	100	59.075	Gallus_gallus
ENSMUSG00000054003	Tdrd9	97	66.288	ENSGACG00000008322	tdrd9	100	65.634	Gasterosteus_aculeatus
ENSMUSG00000054003	Tdrd9	97	91.651	ENSGGOG00000000812	TDRD9	99	85.962	Gorilla_gorilla
ENSMUSG00000054003	Tdrd9	62	51.214	ENSHBUG00000022779	tdrd9	99	51.214	Haplochromis_burtoni
ENSMUSG00000054003	Tdrd9	97	92.600	ENSHGLG00000007727	TDRD9	100	84.176	Heterocephalus_glaber_female
ENSMUSG00000054003	Tdrd9	97	92.600	ENSHGLG00100019237	TDRD9	100	84.176	Heterocephalus_glaber_male
ENSMUSG00000054003	Tdrd9	74	60.902	ENSHCOG00000020886	tdrd9	99	51.133	Hippocampus_comes
ENSMUSG00000054003	Tdrd9	97	63.567	ENSIPUG00000002814	tdrd9	99	49.574	Ictalurus_punctatus
ENSMUSG00000054003	Tdrd9	97	93.738	ENSSTOG00000007890	TDRD9	100	89.288	Ictidomys_tridecemlineatus
ENSMUSG00000054003	Tdrd9	97	95.066	ENSJJAG00000022462	Tdrd9	100	89.747	Jaculus_jaculus
ENSMUSG00000054003	Tdrd9	97	66.038	ENSKMAG00000005523	tdrd9	99	55.104	Kryptolebias_marmoratus
ENSMUSG00000054003	Tdrd9	97	65.275	ENSLBEG00000022006	tdrd9	96	56.265	Labrus_bergylta
ENSMUSG00000054003	Tdrd9	97	75.568	ENSLACG00000002257	TDRD9	99	63.095	Latimeria_chalumnae
ENSMUSG00000054003	Tdrd9	97	65.974	ENSLOCG00000009992	tdrd9	99	57.692	Lepisosteus_oculatus
ENSMUSG00000054003	Tdrd9	97	91.461	ENSLAFG00000007580	TDRD9	100	90.443	Loxodonta_africana
ENSMUSG00000054003	Tdrd9	97	91.651	ENSMFAG00000001293	TDRD9	99	87.973	Macaca_fascicularis
ENSMUSG00000054003	Tdrd9	97	91.651	ENSMMUG00000006243	TDRD9	100	87.973	Macaca_mulatta
ENSMUSG00000054003	Tdrd9	97	91.651	ENSMNEG00000044098	TDRD9	99	86.107	Macaca_nemestrina
ENSMUSG00000054003	Tdrd9	97	91.461	ENSMLEG00000032473	TDRD9	99	87.232	Mandrillus_leucophaeus
ENSMUSG00000054003	Tdrd9	98	66.224	ENSMAMG00000002068	tdrd9	96	55.740	Mastacembelus_armatus
ENSMUSG00000054003	Tdrd9	97	66.855	ENSMZEG00005007746	tdrd9	99	53.874	Maylandia_zebra
ENSMUSG00000054003	Tdrd9	97	72.968	ENSMGAG00000013431	TDRD9	99	64.846	Meleagris_gallopavo
ENSMUSG00000054003	Tdrd9	100	84.964	ENSMAUG00000020617	Tdrd9	100	84.964	Mesocricetus_auratus
ENSMUSG00000054003	Tdrd9	97	92.600	ENSMICG00000000428	TDRD9	99	88.503	Microcebus_murinus
ENSMUSG00000054003	Tdrd9	97	97.343	ENSMOCG00000017012	Tdrd9	100	93.795	Microtus_ochrogaster
ENSMUSG00000054003	Tdrd9	97	64.916	ENSMMOG00000013849	tdrd9	97	54.902	Mola_mola
ENSMUSG00000054003	Tdrd9	62	83.100	ENSMODG00000013609	TDRD9	99	83.100	Monodelphis_domestica
ENSMUSG00000054003	Tdrd9	97	65.348	ENSMALG00000008927	tdrd9	99	52.525	Monopterus_albus
ENSMUSG00000054003	Tdrd9	100	98.554	MGP_CAROLIEiJ_G0018145	Tdrd9	100	98.554	Mus_caroli
ENSMUSG00000054003	Tdrd9	100	97.760	MGP_PahariEiJ_G0029902	Tdrd9	100	98.704	Mus_pahari
ENSMUSG00000054003	Tdrd9	100	99.422	MGP_SPRETEiJ_G0018994	Tdrd9	100	99.629	Mus_spretus
ENSMUSG00000054003	Tdrd9	84	92.308	ENSMPUG00000002286	TDRD9	99	87.587	Mustela_putorius_furo
ENSMUSG00000054003	Tdrd9	97	89.374	ENSMLUG00000011984	TDRD9	99	83.821	Myotis_lucifugus
ENSMUSG00000054003	Tdrd9	97	94.307	ENSNGAG00000021858	Tdrd9	100	90.824	Nannospalax_galili
ENSMUSG00000054003	Tdrd9	91	69.293	ENSNBRG00000008735	tdrd9	99	56.695	Neolamprologus_brichardi
ENSMUSG00000054003	Tdrd9	97	91.271	ENSNLEG00000016251	TDRD9	99	85.220	Nomascus_leucogenys
ENSMUSG00000054003	Tdrd9	74	74.937	ENSMEUG00000014017	-	95	75.278	Notamacropus_eugenii
ENSMUSG00000054003	Tdrd9	97	91.082	ENSODEG00000002255	TDRD9	100	83.743	Octodon_degus
ENSMUSG00000054003	Tdrd9	97	67.797	ENSONIG00000020126	tdrd9	99	54.402	Oreochromis_niloticus
ENSMUSG00000054003	Tdrd9	74	77.945	ENSOANG00000000797	TDRD9	99	70.291	Ornithorhynchus_anatinus
ENSMUSG00000054003	Tdrd9	98	88.302	ENSOCUG00000014788	TDRD9	99	84.403	Oryctolagus_cuniculus
ENSMUSG00000054003	Tdrd9	68	59.511	ENSORLG00000015842	tdrd9	98	48.308	Oryzias_latipes
ENSMUSG00000054003	Tdrd9	87	67.091	ENSORLG00020009475	tdrd9	99	51.582	Oryzias_latipes_hni
ENSMUSG00000054003	Tdrd9	67	63.611	ENSORLG00015008417	tdrd9	97	48.610	Oryzias_latipes_hsok
ENSMUSG00000054003	Tdrd9	97	64.962	ENSOMEG00000006369	tdrd9	99	50.720	Oryzias_melastigma
ENSMUSG00000054003	Tdrd9	97	90.512	ENSOGAG00000007626	TDRD9	99	86.399	Otolemur_garnettii
ENSMUSG00000054003	Tdrd9	97	90.892	ENSOARG00000006675	TDRD9	96	84.324	Ovis_aries
ENSMUSG00000054003	Tdrd9	97	91.651	ENSPPAG00000027180	TDRD9	99	87.156	Pan_paniscus
ENSMUSG00000054003	Tdrd9	97	91.271	ENSPPRG00000021286	TDRD9	99	85.756	Panthera_pardus
ENSMUSG00000054003	Tdrd9	97	91.082	ENSPTIG00000017411	TDRD9	99	80.484	Panthera_tigris_altaica
ENSMUSG00000054003	Tdrd9	97	91.651	ENSPTRG00000006765	TDRD9	99	86.252	Pan_troglodytes
ENSMUSG00000054003	Tdrd9	97	91.651	ENSPANG00000004811	TDRD9	99	85.311	Papio_anubis
ENSMUSG00000054003	Tdrd9	97	65.784	ENSPKIG00000017763	tdrd9	99	51.439	Paramormyrops_kingsleyae
ENSMUSG00000054003	Tdrd9	97	81.629	ENSPSIG00000010466	TDRD9	99	74.369	Pelodiscus_sinensis
ENSMUSG00000054003	Tdrd9	97	64.015	ENSPMGG00000010265	tdrd9	97	54.230	Periophthalmus_magnuspinnatus
ENSMUSG00000054003	Tdrd9	97	97.723	ENSPEMG00000012496	Tdrd9	100	94.517	Peromyscus_maniculatus_bairdii
ENSMUSG00000054003	Tdrd9	64	78.491	ENSPCIG00000016427	TDRD9	99	78.491	Phascolarctos_cinereus
ENSMUSG00000054003	Tdrd9	97	65.607	ENSPFOG00000002400	tdrd9	99	54.196	Poecilia_formosa
ENSMUSG00000054003	Tdrd9	86	65.032	ENSPLAG00000005202	tdrd9	99	53.277	Poecilia_latipinna
ENSMUSG00000054003	Tdrd9	86	65.032	ENSPMEG00000017922	tdrd9	99	53.157	Poecilia_mexicana
ENSMUSG00000054003	Tdrd9	67	65.041	ENSPREG00000015184	tdrd9	96	50.246	Poecilia_reticulata
ENSMUSG00000054003	Tdrd9	74	91.228	ENSPPYG00000006180	-	99	87.334	Pongo_abelii
ENSMUSG00000054003	Tdrd9	64	82.319	ENSPCAG00000015416	-	91	82.645	Procavia_capensis
ENSMUSG00000054003	Tdrd9	96	88.356	ENSPCOG00000015323	TDRD9	99	88.356	Propithecus_coquereli
ENSMUSG00000054003	Tdrd9	74	89.724	ENSPVAG00000011551	-	88	82.086	Pteropus_vampyrus
ENSMUSG00000054003	Tdrd9	97	67.108	ENSPNYG00000022319	tdrd9	99	55.240	Pundamilia_nyererei
ENSMUSG00000054003	Tdrd9	97	68.550	ENSPNAG00000010714	tdrd9	99	54.591	Pygocentrus_nattereri
ENSMUSG00000054003	Tdrd9	100	96.893	ENSRNOG00000053631	Tdrd9	100	96.893	Rattus_norvegicus
ENSMUSG00000054003	Tdrd9	97	91.461	ENSRBIG00000040614	TDRD9	99	85.989	Rhinopithecus_bieti
ENSMUSG00000054003	Tdrd9	97	91.271	ENSRROG00000037241	TDRD9	99	85.673	Rhinopithecus_roxellana
ENSMUSG00000054003	Tdrd9	97	91.461	ENSSBOG00000027466	TDRD9	99	87.462	Saimiri_boliviensis_boliviensis
ENSMUSG00000054003	Tdrd9	80	88.018	ENSSHAG00000013742	TDRD9	99	83.333	Sarcophilus_harrisii
ENSMUSG00000054003	Tdrd9	97	65.169	ENSSFOG00015012742	tdrd9	93	59.340	Scleropages_formosus
ENSMUSG00000054003	Tdrd9	95	67.500	ENSSMAG00000001831	tdrd9	99	55.304	Scophthalmus_maximus
ENSMUSG00000054003	Tdrd9	97	66.105	ENSSDUG00000000483	tdrd9	99	54.925	Seriola_dumerili
ENSMUSG00000054003	Tdrd9	97	67.105	ENSSLDG00000011875	tdrd9	97	57.098	Seriola_lalandi_dorsalis
ENSMUSG00000054003	Tdrd9	61	90.179	ENSSARG00000010748	-	84	86.547	Sorex_araneus
ENSMUSG00000054003	Tdrd9	95	75.930	ENSSPUG00000004504	TDRD9	99	66.936	Sphenodon_punctatus
ENSMUSG00000054003	Tdrd9	97	64.474	ENSSPAG00000012556	tdrd9	98	53.611	Stegastes_partitus
ENSMUSG00000054003	Tdrd9	97	85.932	ENSSSCG00000002552	TDRD9	99	79.783	Sus_scrofa
ENSMUSG00000054003	Tdrd9	74	54.839	ENSTGUG00000016488	-	100	54.839	Taeniopygia_guttata
ENSMUSG00000054003	Tdrd9	91	67.886	ENSTGUG00000012887	-	99	61.326	Taeniopygia_guttata
ENSMUSG00000054003	Tdrd9	90	64.634	ENSTRUG00000009586	tdrd9	95	51.144	Takifugu_rubripes
ENSMUSG00000054003	Tdrd9	91	61.818	ENSTNIG00000017353	tdrd9	99	53.255	Tetraodon_nigroviridis
ENSMUSG00000054003	Tdrd9	57	92.857	ENSTBEG00000003593	-	65	92.857	Tupaia_belangeri
ENSMUSG00000054003	Tdrd9	74	91.228	ENSTTRG00000006405	TDRD9	99	86.282	Tursiops_truncatus
ENSMUSG00000054003	Tdrd9	97	88.994	ENSUAMG00000017361	TDRD9	99	88.275	Ursus_americanus
ENSMUSG00000054003	Tdrd9	97	88.994	ENSUMAG00000024822	TDRD9	99	88.501	Ursus_maritimus
ENSMUSG00000054003	Tdrd9	97	91.651	ENSVVUG00000002584	TDRD9	99	88.406	Vulpes_vulpes
ENSMUSG00000054003	Tdrd9	87	76.433	ENSXETG00000023069	tdrd9	100	66.125	Xenopus_tropicalis
ENSMUSG00000054003	Tdrd9	97	64.972	ENSXCOG00000009311	tdrd9	99	53.774	Xiphophorus_couchianus
ENSMUSG00000054003	Tdrd9	97	64.972	ENSXMAG00000018300	tdrd9	99	53.852	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005515	protein binding	20059948.	IPI	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	20059948.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0007140	male meiotic nuclear division	20059948.	IMP	Process
GO:0007141	male meiosis I	28633017.	IMP	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0007283	spermatogenesis	20059948.28633017.	IMP	Process
GO:0007283	spermatogenesis	-	ISO	Process
GO:0009566	fertilization	20059948.	IMP	Process
GO:0010529	negative regulation of transposition	21873635.	IBA	Process
GO:0010529	negative regulation of transposition	27473657.28633017.	IMP	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0016887	ATPase activity	28633017.	IMP	Function
GO:0030154	cell differentiation	-	IEA	Process
GO:0031047	gene silencing by RNA	-	IEA	Process
GO:0034459	ATP-dependent 3'-5' RNA helicase activity	21873635.	IBA	Function
GO:0034587	piRNA metabolic process	20059948.28633017.	IMP	Process
GO:0043046	DNA methylation involved in gamete generation	20059948.	IMP	Process
GO:0051321	meiotic cell cycle	-	IEA	Process
GO:0071547	piP-body	20011505.20059948.	IDA	Component