EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000054405 (Gene tree)
Gene ID: 68598
Gene Symbol: Dnajc8
Alias: 1110021D09Rik|2010009J04Rik
Full Name: DnaJ heat shock protein family (Hsp40) member C8
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 18193
Position: chr4: 132535550-132553742
Accession: 1915848
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000105937	-	743	-	-	- (aa)	-	-
ENSMUST00000094657	-	1401	-	ENSMUSP00000092242	253 (aa)	-	Q6NZB0
ENSMUST00000139074	-	609	-	ENSMUSP00000122099	36 (aa)	-	E9Q592
ENSMUST00000138334	-	613	-	ENSMUSP00000130135	84 (aa)	-	F6QIL6
ENSMUST00000067467	-	508	-	ENSMUSP00000068069	85 (aa)	-	D3Z4I5
ENSMUST00000144073	-	452	-	ENSMUSP00000131575	61 (aa)	-	E9PZT4
ENSMUST00000105938	-	782	-	-	- (aa)	-	-
ENSMUST00000156385	-	505	-	ENSMUSP00000125885	95 (aa)	-	F7CXJ2
ENSMUST00000105940	-	772	-	ENSMUSP00000101560	234 (aa)	-	A2ALF3
ENSMUST00000150207	-	932	-	ENSMUSP00000121009	244 (aa)	-	F6TQL3
ENSMUST00000142281	-	1837	-	-	- (aa)	-	-
ENSMUST00000105939	-	746	-	ENSMUSP00000101559	219 (aa)	-	A2ALF0

Gene Model

Click here to download ENSMUSG00000054405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000054405's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000054405	Dnajc8	100	99.209	ENSG00000126698	DNAJC8	100	99.209	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0030544	Hsp70 protein binding	-	ISO	Function
GO:0045171	intercellular bridge	-	ISO	Component