EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000054679 (Gene tree)
Gene ID: 272009
Gene Symbol: Srsf12
Alias: Sfrs13b|Srrp
Full Name: serine/arginine-rich splicing factor 12
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 24350 bases
Position: chr4:33208991-33233340
Accession: 2661424
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000103794	RRM_1	PF00076.22	5e-18	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000067864	-	2939	XM_006537959	ENSMUSP00000067939	266 (aa)	XP_006538022	Q8C8K3
ENSMUST00000108159	-	829	XM_006537958	ENSMUSP00000103794	261 (aa)	XP_006538021	A3KG57

Gene Model

Click here to download ENSMUSG00000054679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000054679's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000054679	Srsf12	100	89.655	ENSG00000154548	SRSF12	100	89.655	Homo_sapiens
ENSMUSG00000054679	Srsf12	100	86.641	ENSAMEG00000000418	SRSF12	100	86.641	Ailuropoda_melanoleuca
ENSMUSG00000054679	Srsf12	100	83.577	ENSANAG00000023238	SRSF12	100	83.577	Aotus_nancymaae
ENSMUSG00000054679	Srsf12	100	90.421	ENSBTAG00000046235	SRSF12	100	90.421	Bos_taurus
ENSMUSG00000054679	Srsf12	100	89.313	ENSCJAG00000038575	SRSF12	100	89.313	Callithrix_jacchus
ENSMUSG00000054679	Srsf12	92	90.000	ENSCAFG00000030745	SRSF12	75	90.000	Canis_familiaris
ENSMUSG00000054679	Srsf12	100	90.805	ENSCAFG00020015999	SRSF12	100	90.805	Canis_lupus_dingo
ENSMUSG00000054679	Srsf12	100	89.313	ENSCHIG00000014596	SRSF12	100	89.313	Capra_hircus
ENSMUSG00000054679	Srsf12	92	87.083	ENSTSYG00000001269	SRSF12	98	87.083	Carlito_syrichta
ENSMUSG00000054679	Srsf12	97	84.706	ENSCAPG00000001547	SRSF12	100	84.706	Cavia_aperea
ENSMUSG00000054679	Srsf12	92	88.703	ENSCPOG00000010917	SRSF12	100	88.703	Cavia_porcellus
ENSMUSG00000054679	Srsf12	100	89.655	ENSCCAG00000033029	SRSF12	100	89.655	Cebus_capucinus
ENSMUSG00000054679	Srsf12	100	89.655	ENSCATG00000030620	SRSF12	100	89.655	Cercocebus_atys
ENSMUSG00000054679	Srsf12	92	89.540	ENSCLAG00000013868	SRSF12	100	89.540	Chinchilla_lanigera
ENSMUSG00000054679	Srsf12	100	88.931	ENSCSAG00000017325	SRSF12	100	88.931	Chlorocebus_sabaeus
ENSMUSG00000054679	Srsf12	77	88.177	ENSCHOG00000013911	SRSF12	100	88.177	Choloepus_hoffmanni
ENSMUSG00000054679	Srsf12	92	88.382	ENSCANG00000038708	SRSF12	100	88.382	Colobus_angolensis_palliatus
ENSMUSG00000054679	Srsf12	92	94.979	ENSCGRG00000017064	Srsf12	100	94.979	Cricetulus_griseus_crigri
ENSMUSG00000054679	Srsf12	92	66.109	ENSETEG00000001386	SRSF12	100	66.109	Echinops_telfairi
ENSMUSG00000054679	Srsf12	58	51.613	ENSEBUG00000007679	SRSF12	50	75.000	Eptatretus_burgeri
ENSMUSG00000054679	Srsf12	100	89.695	ENSEASG00005005686	SRSF12	100	89.695	Equus_asinus_asinus
ENSMUSG00000054679	Srsf12	100	90.421	ENSECAG00000019135	SRSF12	100	90.421	Equus_caballus
ENSMUSG00000054679	Srsf12	100	89.313	ENSEEUG00000011026	SRSF12	100	89.313	Erinaceus_europaeus
ENSMUSG00000054679	Srsf12	100	91.188	ENSFCAG00000029256	SRSF12	100	91.188	Felis_catus
ENSMUSG00000054679	Srsf12	92	88.703	ENSFDAG00000003699	SRSF12	100	88.703	Fukomys_damarensis
ENSMUSG00000054679	Srsf12	92	89.121	ENSGGOG00000024850	SRSF12	97	89.121	Gorilla_gorilla
ENSMUSG00000054679	Srsf12	100	89.655	ENSHGLG00000001138	SRSF12	100	89.655	Heterocephalus_glaber_female
ENSMUSG00000054679	Srsf12	92	88.703	ENSHGLG00100005391	SRSF12	82	88.703	Heterocephalus_glaber_male
ENSMUSG00000054679	Srsf12	100	89.313	ENSSTOG00000007170	SRSF12	100	89.313	Ictidomys_tridecemlineatus
ENSMUSG00000054679	Srsf12	80	64.167	ENSLACG00000004376	SRSF12	97	67.399	Latimeria_chalumnae
ENSMUSG00000054679	Srsf12	92	87.967	ENSLAFG00000005458	SRSF12	100	87.967	Loxodonta_africana
ENSMUSG00000054679	Srsf12	100	89.655	ENSMFAG00000036543	SRSF12	100	89.655	Macaca_fascicularis
ENSMUSG00000054679	Srsf12	100	88.931	ENSMMUG00000014941	SRSF12	100	88.931	Macaca_mulatta
ENSMUSG00000054679	Srsf12	100	89.655	ENSMNEG00000030957	SRSF12	100	89.655	Macaca_nemestrina
ENSMUSG00000054679	Srsf12	92	88.797	ENSMLEG00000042204	SRSF12	100	88.797	Mandrillus_leucophaeus
ENSMUSG00000054679	Srsf12	97	94.466	ENSMAUG00000017845	Srsf12	100	94.466	Mesocricetus_auratus
ENSMUSG00000054679	Srsf12	100	90.038	ENSMICG00000034783	SRSF12	100	90.038	Microcebus_murinus
ENSMUSG00000054679	Srsf12	100	95.402	ENSMOCG00000006973	Srsf12	100	95.402	Microtus_ochrogaster
ENSMUSG00000054679	Srsf12	98	77.519	ENSMODG00000018282	SRSF12	100	76.357	Monodelphis_domestica
ENSMUSG00000054679	Srsf12	100	98.467	MGP_CAROLIEiJ_G0025873	-	100	98.467	Mus_caroli
ENSMUSG00000054679	Srsf12	100	98.084	MGP_PahariEiJ_G0023996	-	100	98.084	Mus_pahari
ENSMUSG00000054679	Srsf12	100	100.000	MGP_SPRETEiJ_G0026822	-	100	100.000	Mus_spretus
ENSMUSG00000054679	Srsf12	92	86.640	ENSMLUG00000001545	SRSF12	100	86.640	Myotis_lucifugus
ENSMUSG00000054679	Srsf12	100	89.655	ENSNGAG00000019092	Srsf12	100	89.655	Nannospalax_galili
ENSMUSG00000054679	Srsf12	92	88.382	ENSNLEG00000032347	SRSF12	100	88.382	Nomascus_leucogenys
ENSMUSG00000054679	Srsf12	92	85.000	ENSOPRG00000016052	SRSF12	100	85.000	Ochotona_princeps
ENSMUSG00000054679	Srsf12	100	83.969	ENSODEG00000009174	-	100	83.969	Octodon_degus
ENSMUSG00000054679	Srsf12	95	89.157	ENSOCUG00000000945	SRSF12	100	89.157	Oryctolagus_cuniculus
ENSMUSG00000054679	Srsf12	92	87.917	ENSOGAG00000006421	SRSF12	100	87.917	Otolemur_garnettii
ENSMUSG00000054679	Srsf12	100	83.206	ENSPPAG00000041573	SRSF12	99	83.846	Pan_paniscus
ENSMUSG00000054679	Srsf12	100	91.188	ENSPPRG00000018838	SRSF12	100	91.188	Panthera_pardus
ENSMUSG00000054679	Srsf12	100	89.655	ENSPTRG00000018415	SRSF12	100	89.655	Pan_troglodytes
ENSMUSG00000054679	Srsf12	100	88.931	ENSPANG00000016731	SRSF12	100	88.931	Papio_anubis
ENSMUSG00000054679	Srsf12	100	94.636	ENSPEMG00000006893	Srsf12	100	94.636	Peromyscus_maniculatus_bairdii
ENSMUSG00000054679	Srsf12	100	77.011	ENSPCIG00000021713	SRSF12	100	77.395	Phascolarctos_cinereus
ENSMUSG00000054679	Srsf12	100	86.260	ENSPPYG00000016837	SRSF12	100	86.260	Pongo_abelii
ENSMUSG00000054679	Srsf12	100	72.519	ENSPCAG00000010020	SRSF12	100	72.519	Procavia_capensis
ENSMUSG00000054679	Srsf12	100	89.695	ENSPCOG00000001227	SRSF12	100	89.695	Propithecus_coquereli
ENSMUSG00000054679	Srsf12	92	87.917	ENSPVAG00000001046	SRSF12	100	87.917	Pteropus_vampyrus
ENSMUSG00000054679	Srsf12	100	89.272	ENSRNOG00000051383	Srsf12	100	89.272	Rattus_norvegicus
ENSMUSG00000054679	Srsf12	92	89.121	ENSRBIG00000029756	SRSF12	97	89.121	Rhinopithecus_bieti
ENSMUSG00000054679	Srsf12	99	89.575	ENSRROG00000035967	SRSF12	100	89.575	Rhinopithecus_roxellana
ENSMUSG00000054679	Srsf12	92	82.609	ENSSBOG00000032399	SRSF12	100	82.609	Saimiri_boliviensis_boliviensis
ENSMUSG00000054679	Srsf12	92	88.797	ENSSARG00000007795	SRSF12	100	88.797	Sorex_araneus
ENSMUSG00000054679	Srsf12	92	75.732	ENSSPUG00000001194	SRSF12	97	73.384	Sphenodon_punctatus
ENSMUSG00000054679	Srsf12	100	90.421	ENSSSCG00000032781	SRSF12	100	90.421	Sus_scrofa
ENSMUSG00000054679	Srsf12	92	85.774	ENSTBEG00000008665	-	100	85.774	Tupaia_belangeri
ENSMUSG00000054679	Srsf12	59	87.742	ENSTBEG00000015120	-	100	84.516	Tupaia_belangeri
ENSMUSG00000054679	Srsf12	100	84.351	ENSTTRG00000003682	SRSF12	100	84.351	Tursiops_truncatus
ENSMUSG00000054679	Srsf12	98	83.721	ENSUMAG00000010534	SRSF12	98	83.721	Ursus_maritimus
ENSMUSG00000054679	Srsf12	100	83.588	ENSVPAG00000004175	SRSF12	100	83.588	Vicugna_pacos
ENSMUSG00000054679	Srsf12	95	87.500	ENSVVUG00000010197	SRSF12	99	87.500	Vulpes_vulpes
ENSMUSG00000054679	Srsf12	99	70.189	ENSXETG00000005385	srsf12	97	69.057	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000395	mRNA 5'-splice site recognition	21873635.	IBA	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0016607	nuclear speck	21873635.	IBA	Component
GO:0045292	mRNA cis splicing, via spliceosome	21873635.	IBA	Process