EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000054766 (Gene tree)
Gene ID: 56086
Gene Symbol: Set
Alias: 2610030F17Rik|5730420M11Rik|StF-IT-1
Full Name: SET nuclear oncogene
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 15200
Position: chr2: 30057378-30072577
Accession: 1860267
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000147590	-	844	-	-	- (aa)	-	-
ENSMUST00000137291	-	952	-	-	- (aa)	-	-
ENSMUST00000125824	-	1112	-	-	- (aa)	-	-
ENSMUST00000149578	-	633	-	ENSMUSP00000119824	151 (aa)	-	A2BE92
ENSMUST00000067996	-	2834	-	ENSMUSP00000070002	277 (aa)	-	Q9EQU5
ENSMUST00000134364	-	790	-	ENSMUSP00000114557	215 (aa)	-	A2BE93
ENSMUST00000102866	-	2824	-	ENSMUSP00000099930	289 (aa)	-	Q9EQU5

Gene Model

Click here to download ENSMUSG00000054766's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000054766's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000054766	Set	100	97.834	ENSG00000119335	SET	100	97.834	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	10716735.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005783	endoplasmic reticulum	-	ISO	Component
GO:0005811	lipid droplet	-	ISO	Component
GO:0006334	nucleosome assembly	-	IEA	Process
GO:0032991	protein-containing complex	-	ISO	Component
GO:0043524	negative regulation of neuron apoptotic process	-	ISO	Process
GO:0045892	negative regulation of transcription, DNA-templated	-	ISO	Process
GO:0048471	perinuclear region of cytoplasm	-	ISO	Component