EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000054889 (Gene tree)
Gene ID: 109620
Gene Symbol: Dsp
Alias: 2300002E22Rik|5730453H04Rik|DP|rul
Full Name: desmoplakin
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 47284
Position: chr13: 38151294-38198577
Accession: 109611
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000145151	-	534	-	-	- (aa)	-	-
ENSMUST00000124830	-	9592	-	ENSMUSP00000115062	2883 (aa)	-	E9Q557
ENSMUST00000127906	-	7761	XM_006516532	ENSMUSP00000117252	2284 (aa)	XP_006516595	E9PZW0

Gene Model

Click here to download ENSMUSG00000054889's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05412	Arrhythmogenic right ventricular cardiomyopathy (ARVC)	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000054889's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000054889	Dsp	99	95.007	ENSG00000096696	DSP	99	94.963	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001533	cornified envelope	-	ISO	Component
GO:0002934	desmosome organization	9864371.16917092.	IMP	Process
GO:0003223	ventricular compact myocardium morphogenesis	16917092.	IMP	Process
GO:0005080	protein kinase C binding	-	ISO	Function
GO:0005198	structural molecule activity	21873635.	IBA	Function
GO:0005198	structural molecule activity	-	ISO	Function
GO:0005515	protein binding	20093627.26403541.	IPI	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005882	intermediate filament	21873635.	IBA	Component
GO:0005882	intermediate filament	16917092.	IDA	Component
GO:0005886	plasma membrane	21873635.	IBA	Component
GO:0005886	plasma membrane	26403541.	IDA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005911	cell-cell junction	9864371.19001636.	IDA	Component
GO:0005916	fascia adherens	-	ISO	Component
GO:0014704	intercalated disc	21873635.	IBA	Component
GO:0014704	intercalated disc	17535849.26403541.	IDA	Component
GO:0014704	intercalated disc	-	ISO	Component
GO:0016020	membrane	21873635.	IBA	Component
GO:0016020	membrane	19723622.	ISO	Component
GO:0016323	basolateral plasma membrane	12951053.	IDA	Component
GO:0018149	peptide cross-linking	-	ISO	Process
GO:0030054	cell junction	-	IEA	Component
GO:0030057	desmosome	14673151.16418220.18496566.25617501.	IDA	Component
GO:0030057	desmosome	-	ISO	Component
GO:0030216	keratinocyte differentiation	-	ISO	Process
GO:0030674	protein binding, bridging	-	ISO	Function
GO:0034332	adherens junction organization	11781569.	IMP	Process
GO:0042060	wound healing	21873635.	IBA	Process
GO:0043588	skin development	21873635.	IBA	Process
GO:0043588	skin development	11781569.	IMP	Process
GO:0045104	intermediate filament cytoskeleton organization	21873635.	IBA	Process
GO:0045104	intermediate filament cytoskeleton organization	9864371.	IMP	Process
GO:0045109	intermediate filament organization	16917092.	IMP	Process
GO:0050839	cell adhesion molecule binding	-	IEA	Function
GO:0071896	protein localization to adherens junction	16917092.	IMP	Process
GO:0086073	bundle of His cell-Purkinje myocyte adhesion involved in cell communication	-	ISO	Process
GO:0086091	regulation of heart rate by cardiac conduction	-	ISO	Process
GO:0097110	scaffold protein binding	-	ISO	Function
GO:0098609	cell-cell adhesion	21873635.	IBA	Process
GO:0098609	cell-cell adhesion	9864371.11781569.	IMP	Process
GO:0098911	regulation of ventricular cardiac muscle cell action potential	-	ISO	Process