EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000055553 (Gene tree)
Gene ID: 75620
Gene Symbol: Kxd1
Alias: 0610030B01Rik|2810422J05Rik
Full Name: KxDL motif containing 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 19685 bases
Position: chr8:70508272-70527956
Accession: 1922870
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000113804	Ribosomal_L40e	PF01020.17	2.7e-32	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000117580	-	696	-	ENSMUSP00000112561	114 (aa)	-	D3YWA5
ENSMUST00000137610	-	424	-	ENSMUSP00000121539	100 (aa)	-	D3Z2M8
ENSMUST00000093456	-	1216	-	ENSMUSP00000091165	177 (aa)	-	Q80XH1
ENSMUST00000121623	-	884	-	ENSMUSP00000113804	232 (aa)	-	E9QNP0
ENSMUST00000132867	-	436	-	ENSMUSP00000123679	37 (aa)	-	D3YXX6
ENSMUST00000155677	-	639	-	ENSMUSP00000123548	114 (aa)	-	D3YWA5
ENSMUST00000118850	-	992	-	ENSMUSP00000113816	219 (aa)	-	G3X9Z9
ENSMUST00000138260	-	917	-	ENSMUSP00000123438	193 (aa)	-	E9Q4P0
ENSMUST00000138586	-	1033	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000055553's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000055553's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000055553	Kxd1	55	90.625	ENSMUSG00000062742	Gm5239	100	90.625
ENSMUSG00000055553	Kxd1	55	100.000	ENSMUSG00000068240	Gm11808	100	100.000
ENSMUSG00000055553	Kxd1	55	100.000	ENSMUSG00000090137	Uba52	100	100.000

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	22554196.	IPI	Function
GO:0005764	lysosome	-	IEA	Component
GO:0016020	membrane	-	IEA	Component
GO:0016192	vesicle-mediated transport	22554196.	IMP	Process
GO:0031083	BLOC-1 complex	21873635.	IBA	Component
GO:0031083	BLOC-1 complex	22554196.	IDA	Component
GO:0032418	lysosome localization	21873635.	IBA	Process
GO:0032418	lysosome localization	-	ISO	Process
GO:0099078	BORC complex	21873635.	IBA	Component
GO:0099078	BORC complex	-	ISO	Component