EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000055835 (Gene tree)
Gene ID: 22640
Gene Symbol: Zfp1
Alias: Fnp-1|Zfp-1|mkr-1
Full Name: zinc finger protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 27611 bases
Position: chr8:111643401-111671011
Accession: 99154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000148511	zf-C2H2	PF00096.26	1.2e-51	1	8
ENSMUSP00000148511	zf-C2H2	PF00096.26	1.2e-51	2	8
ENSMUSP00000148511	zf-C2H2	PF00096.26	1.2e-51	3	8
ENSMUSP00000148511	zf-C2H2	PF00096.26	1.2e-51	4	8
ENSMUSP00000148511	zf-C2H2	PF00096.26	1.2e-51	5	8
ENSMUSP00000148511	zf-C2H2	PF00096.26	1.2e-51	6	8
ENSMUSP00000148511	zf-C2H2	PF00096.26	1.2e-51	7	8
ENSMUSP00000148511	zf-C2H2	PF00096.26	1.2e-51	8	8
ENSMUSP00000148310	zf-C2H2	PF00096.26	2e-51	1	8
ENSMUSP00000148310	zf-C2H2	PF00096.26	2e-51	2	8
ENSMUSP00000148310	zf-C2H2	PF00096.26	2e-51	3	8
ENSMUSP00000148310	zf-C2H2	PF00096.26	2e-51	4	8
ENSMUSP00000148310	zf-C2H2	PF00096.26	2e-51	5	8
ENSMUSP00000148310	zf-C2H2	PF00096.26	2e-51	6	8
ENSMUSP00000148310	zf-C2H2	PF00096.26	2e-51	7	8
ENSMUSP00000148310	zf-C2H2	PF00096.26	2e-51	8	8
ENSMUSP00000076964	zf-C2H2	PF00096.26	2.8e-51	1	8
ENSMUSP00000076964	zf-C2H2	PF00096.26	2.8e-51	2	8
ENSMUSP00000076964	zf-C2H2	PF00096.26	2.8e-51	3	8
ENSMUSP00000076964	zf-C2H2	PF00096.26	2.8e-51	4	8
ENSMUSP00000076964	zf-C2H2	PF00096.26	2.8e-51	5	8
ENSMUSP00000076964	zf-C2H2	PF00096.26	2.8e-51	6	8
ENSMUSP00000076964	zf-C2H2	PF00096.26	2.8e-51	7	8
ENSMUSP00000076964	zf-C2H2	PF00096.26	2.8e-51	8	8
ENSMUSP00000148511	zf-met	PF12874.7	2.1e-08	1	1
ENSMUSP00000148310	zf-met	PF12874.7	3.4e-08	1	1
ENSMUSP00000076964	zf-met	PF12874.7	4.5e-08	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000077791	-	1811	-	ENSMUSP00000076964	403 (aa)	-	Q3UI68
ENSMUST00000212072	-	1930	XM_017312663	ENSMUSP00000148511	370 (aa)	XP_017168152	A0A1D5RLU7
ENSMUST00000212206	-	1636	-	ENSMUSP00000148472	64 (aa)	-	A0A1D5RLR2
ENSMUST00000211926	-	1409	-	ENSMUSP00000148310	389 (aa)	-	A0A1D5RLC5

Gene Model

Click here to download ENSMUSG00000055835's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000055835's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000055835	Zfp1	99	50.617	ENSMUSG00000062743	Zfp677	99	52.263
ENSMUSG00000055835	Zfp1	87	52.252	ENSMUSG00000047371	Zfp768	51	52.018
ENSMUSG00000055835	Zfp1	99	49.793	ENSMUSG00000114923	Gm49345	98	49.793
ENSMUSG00000055835	Zfp1	99	50.185	ENSMUSG00000074282	Zfp94	96	50.185
ENSMUSG00000055835	Zfp1	99	48.963	ENSMUSG00000074824	Rslcan18	86	48.963
ENSMUSG00000055835	Zfp1	99	49.793	ENSMUSG00000074472	Zfp872	99	45.113
ENSMUSG00000055835	Zfp1	98	41.429	ENSMUSG00000034800	Zfp661	96	41.429
ENSMUSG00000055835	Zfp1	88	57.534	ENSMUSG00000052675	Zfp112	57	57.534
ENSMUSG00000055835	Zfp1	99	34.684	ENSMUSG00000078580	E430018J23Rik	86	35.381
ENSMUSG00000055835	Zfp1	100	47.059	ENSMUSG00000022526	Zfp251	97	47.059
ENSMUSG00000055835	Zfp1	84	57.042	ENSMUSG00000059689	Zfp637	93	56.780
ENSMUSG00000055835	Zfp1	99	40.144	ENSMUSG00000054519	Zfp867	95	39.600
ENSMUSG00000055835	Zfp1	71	56.818	ENSMUSG00000092416	Zfp141	63	56.818
ENSMUSG00000055835	Zfp1	100	52.489	ENSMUSG00000059142	Zfp945	95	52.489
ENSMUSG00000055835	Zfp1	79	56.522	ENSMUSG00000068962	Zfp114	69	56.522
ENSMUSG00000055835	Zfp1	100	42.857	ENSMUSG00000017667	Zfp334	99	50.427
ENSMUSG00000055835	Zfp1	98	51.440	ENSMUSG00000012640	Zfp715	95	51.440
ENSMUSG00000055835	Zfp1	99	45.161	ENSMUSG00000030823	9130019O22Rik	90	45.161
ENSMUSG00000055835	Zfp1	99	49.515	ENSMUSG00000057551	Zfp317	90	49.515
ENSMUSG00000055835	Zfp1	99	38.078	ENSMUSG00000057396	Zfp759	99	40.391
ENSMUSG00000055835	Zfp1	78	61.905	ENSMUSG00000050605	Zfp61	60	61.905
ENSMUSG00000055835	Zfp1	100	54.545	ENSMUSG00000069743	Zfp820	95	54.545
ENSMUSG00000055835	Zfp1	100	47.926	ENSMUSG00000023892	Zfp51	94	47.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000055835	Zfp1	100	86.386	ENSG00000184517	ZFP1	100	86.386	Homo_sapiens
ENSMUSG00000055835	Zfp1	100	84.097	ENSAMEG00000001261	ZFP1	99	84.864	Ailuropoda_melanoleuca
ENSMUSG00000055835	Zfp1	100	86.881	ENSANAG00000028644	ZFP1	100	86.881	Aotus_nancymaae
ENSMUSG00000055835	Zfp1	100	85.215	ENSBTAG00000000868	ZFP1	100	85.891	Bos_taurus
ENSMUSG00000055835	Zfp1	100	86.634	ENSCJAG00000014349	ZFP1	100	86.634	Callithrix_jacchus
ENSMUSG00000055835	Zfp1	99	84.864	ENSCAFG00000020085	ZFP1	100	84.864	Canis_familiaris
ENSMUSG00000055835	Zfp1	99	84.826	ENSCAFG00020001547	ZFP1	99	84.826	Canis_lupus_dingo
ENSMUSG00000055835	Zfp1	100	85.185	ENSCHIG00000015281	ZFP1	100	85.185	Capra_hircus
ENSMUSG00000055835	Zfp1	100	86.139	ENSTSYG00000029077	ZFP1	100	86.139	Carlito_syrichta
ENSMUSG00000055835	Zfp1	100	83.243	ENSCPOG00000000634	ZFP1	99	84.131	Cavia_porcellus
ENSMUSG00000055835	Zfp1	100	86.881	ENSCCAG00000031497	ZFP1	100	86.881	Cebus_capucinus
ENSMUSG00000055835	Zfp1	100	86.634	ENSCATG00000039477	ZFP1	100	86.634	Cercocebus_atys
ENSMUSG00000055835	Zfp1	96	84.034	ENSCLAG00000004223	ZFP1	99	84.034	Chinchilla_lanigera
ENSMUSG00000055835	Zfp1	99	87.000	ENSCSAG00000003718	ZFP1	99	87.000	Chlorocebus_sabaeus
ENSMUSG00000055835	Zfp1	99	77.889	ENSCHOG00000003880	ZFP1	99	77.889	Choloepus_hoffmanni
ENSMUSG00000055835	Zfp1	100	86.634	ENSCANG00000038483	ZFP1	100	86.634	Colobus_angolensis_palliatus
ENSMUSG00000055835	Zfp1	100	90.323	ENSCGRG00001010967	Zfp1	100	90.323	Cricetulus_griseus_chok1gshd
ENSMUSG00000055835	Zfp1	100	90.074	ENSCGRG00000016788	-	100	90.074	Cricetulus_griseus_crigri
ENSMUSG00000055835	Zfp1	94	78.510	ENSDNOG00000010525	-	100	78.510	Dasypus_novemcinctus
ENSMUSG00000055835	Zfp1	96	84.594	ENSDNOG00000006405	-	100	84.594	Dasypus_novemcinctus
ENSMUSG00000055835	Zfp1	100	81.622	ENSDORG00000011934	Zfp1	99	82.412	Dipodomys_ordii
ENSMUSG00000055835	Zfp1	100	84.595	ENSEASG00005013460	ZFP1	99	85.323	Equus_asinus_asinus
ENSMUSG00000055835	Zfp1	100	84.595	ENSECAG00000014727	ZFP1	99	85.323	Equus_caballus
ENSMUSG00000055835	Zfp1	100	84.406	ENSFCAG00000024047	ZFP1	100	84.406	Felis_catus
ENSMUSG00000055835	Zfp1	100	86.139	ENSGGOG00000006121	ZFP1	100	86.139	Gorilla_gorilla
ENSMUSG00000055835	Zfp1	100	85.405	ENSHGLG00000016406	-	99	86.398	Heterocephalus_glaber_female
ENSMUSG00000055835	Zfp1	99	85.139	ENSHGLG00100004688	-	99	85.139	Heterocephalus_glaber_male
ENSMUSG00000055835	Zfp1	99	85.286	ENSSTOG00000022317	ZFP1	100	85.286	Ictidomys_tridecemlineatus
ENSMUSG00000055835	Zfp1	100	83.514	ENSJJAG00000019878	Zfp1	100	84.103	Jaculus_jaculus
ENSMUSG00000055835	Zfp1	99	84.712	ENSLAFG00000003125	ZFP1	100	84.712	Loxodonta_africana
ENSMUSG00000055835	Zfp1	100	86.634	ENSMFAG00000001812	ZFP1	100	86.634	Macaca_fascicularis
ENSMUSG00000055835	Zfp1	100	86.634	ENSMMUG00000011587	ZFP1	100	86.634	Macaca_mulatta
ENSMUSG00000055835	Zfp1	100	86.634	ENSMNEG00000041941	ZFP1	100	86.634	Macaca_nemestrina
ENSMUSG00000055835	Zfp1	100	86.634	ENSMLEG00000021950	ZFP1	100	86.634	Mandrillus_leucophaeus
ENSMUSG00000055835	Zfp1	100	87.297	ENSMAUG00000007745	Zfp1	100	87.841	Mesocricetus_auratus
ENSMUSG00000055835	Zfp1	100	86.352	ENSMICG00000015124	ZFP1	100	86.352	Microcebus_murinus
ENSMUSG00000055835	Zfp1	100	87.027	ENSMOCG00000002761	Zfp1	100	87.719	Microtus_ochrogaster
ENSMUSG00000055835	Zfp1	100	97.270	MGP_CAROLIEiJ_G0031579	Zfp1	100	97.270	Mus_caroli
ENSMUSG00000055835	Zfp1	100	95.946	MGP_PahariEiJ_G0023178	Zfp1	100	95.782	Mus_pahari
ENSMUSG00000055835	Zfp1	100	99.007	MGP_SPRETEiJ_G0032697	Zfp1	100	99.007	Mus_spretus
ENSMUSG00000055835	Zfp1	100	84.158	ENSMPUG00000009946	ZFP1	99	84.158	Mustela_putorius_furo
ENSMUSG00000055835	Zfp1	100	82.162	ENSMLUG00000002042	ZFP1	100	82.836	Myotis_lucifugus
ENSMUSG00000055835	Zfp1	99	87.000	ENSNGAG00000016319	Zfp1	98	87.000	Nannospalax_galili
ENSMUSG00000055835	Zfp1	100	86.139	ENSNLEG00000013001	ZFP1	100	86.139	Nomascus_leucogenys
ENSMUSG00000055835	Zfp1	100	81.931	ENSOPRG00000006123	ZFP1	100	81.931	Ochotona_princeps
ENSMUSG00000055835	Zfp1	100	84.906	ENSODEG00000014404	ZFP1	99	85.642	Octodon_degus
ENSMUSG00000055835	Zfp1	99	83.375	ENSOCUG00000001924	ZFP1	100	83.375	Oryctolagus_cuniculus
ENSMUSG00000055835	Zfp1	100	84.906	ENSOGAG00000001902	ZFP1	98	85.500	Otolemur_garnettii
ENSMUSG00000055835	Zfp1	100	85.432	ENSOARG00000006461	ZFP1	100	85.432	Ovis_aries
ENSMUSG00000055835	Zfp1	100	85.891	ENSPPAG00000033168	ZFP1	100	85.891	Pan_paniscus
ENSMUSG00000055835	Zfp1	100	84.653	ENSPPRG00000007804	ZFP1	100	84.653	Panthera_pardus
ENSMUSG00000055835	Zfp1	100	84.158	ENSPTIG00000009843	ZFP1	100	84.158	Panthera_tigris_altaica
ENSMUSG00000055835	Zfp1	100	86.386	ENSPTRG00000008354	ZFP1	100	86.386	Pan_troglodytes
ENSMUSG00000055835	Zfp1	100	86.881	ENSPANG00000016568	ZFP1	100	86.881	Papio_anubis
ENSMUSG00000055835	Zfp1	100	85.891	ENSPPYG00000007556	ZFP1	100	85.891	Pongo_abelii
ENSMUSG00000055835	Zfp1	99	85.213	ENSPCAG00000007561	ZFP1	99	85.213	Procavia_capensis
ENSMUSG00000055835	Zfp1	100	85.175	ENSPCOG00000023041	ZFP1	99	85.175	Propithecus_coquereli
ENSMUSG00000055835	Zfp1	100	91.892	ENSRNOG00000019059	Zfp1	99	92.231	Rattus_norvegicus
ENSMUSG00000055835	Zfp1	100	86.881	ENSRBIG00000039257	ZFP1	100	86.881	Rhinopithecus_bieti
ENSMUSG00000055835	Zfp1	100	86.881	ENSRROG00000042823	ZFP1	100	86.881	Rhinopithecus_roxellana
ENSMUSG00000055835	Zfp1	100	86.881	ENSSBOG00000020206	ZFP1	100	86.881	Saimiri_boliviensis_boliviensis
ENSMUSG00000055835	Zfp1	100	81.989	ENSSARG00000013922	ZFP1	100	82.178	Sorex_araneus
ENSMUSG00000055835	Zfp1	100	84.444	ENSSSCG00000022668	ZFP1	100	84.444	Sus_scrofa
ENSMUSG00000055835	Zfp1	96	84.034	ENSTBEG00000011217	ZFP1	100	84.034	Tupaia_belangeri
ENSMUSG00000055835	Zfp1	99	85.714	ENSTTRG00000008949	ZFP1	99	85.714	Tursiops_truncatus
ENSMUSG00000055835	Zfp1	100	84.636	ENSUAMG00000017632	ZFP1	100	85.360	Ursus_americanus
ENSMUSG00000055835	Zfp1	100	84.636	ENSUMAG00000014322	ZFP1	100	85.360	Ursus_maritimus
ENSMUSG00000055835	Zfp1	96	83.473	ENSVPAG00000012526	ZFP1	99	83.473	Vicugna_pacos
ENSMUSG00000055835	Zfp1	99	85.075	ENSVVUG00000024277	ZFP1	99	85.075	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function