EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000055884 (Gene tree)
Gene ID: 104806
Gene Symbol: Fancm
Alias: C730036B14Rik|D12Ertd364e
Full Name: Fanconi anemia%2C complementation group M
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 56456 bases
Position: chr12:65075603-65132058
Accession: 2442306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000054797	ResIII	PF04851.15	5.9e-17	1	1
ENSMUSP00000054797	DEAD	PF00270.29	2.8e-16	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000221838	-	502	-	ENSMUSP00000152396	167 (aa)	-	A0A1Y7VLB8
ENSMUST00000222521	-	542	-	-	- (aa)	-	-
ENSMUST00000221175	-	621	-	ENSMUSP00000152223	121 (aa)	-	A0A1Y7VKY9
ENSMUST00000222086	-	563	-	-	- (aa)	-	-
ENSMUST00000222540	-	7816	XM_017314929	ENSMUSP00000152854	664 (aa)	XP_017170418	A0A1Y7VKF2
ENSMUST00000223401	-	4050	-	-	- (aa)	-	-
ENSMUST00000058889	-	7775	XM_006515340	ENSMUSP00000054797	2021 (aa)	XP_006515403	Q8BGE5
ENSMUST00000223051	-	1682	-	-	- (aa)	-	-
ENSMUST00000221937	-	325	-	ENSMUSP00000152885	109 (aa)	-	A0A1Y7VMA3

Gene Model

Click here to download ENSMUSG00000055884's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000055884's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000055884	Fancm	98	82.335	ENSG00000187790	FANCM	99	82.335	Homo_sapiens
ENSMUSG00000055884	Fancm	53	52.459	ENSAPOG00000014274	-	96	52.459	Acanthochromis_polyacanthus
ENSMUSG00000055884	Fancm	98	80.746	ENSAMEG00000002114	FANCM	99	62.409	Ailuropoda_melanoleuca
ENSMUSG00000055884	Fancm	95	63.480	ENSACIG00000005444	-	98	62.805	Amphilophus_citrinellus
ENSMUSG00000055884	Fancm	95	58.074	ENSATEG00000012412	-	70	54.239	Anabas_testudineus
ENSMUSG00000055884	Fancm	98	80.240	ENSANAG00000025075	FANCM	99	63.874	Aotus_nancymaae
ENSMUSG00000055884	Fancm	95	57.644	ENSACLG00000016008	-	80	52.350	Astatotilapia_calliptera
ENSMUSG00000055884	Fancm	96	56.188	ENSAMXG00000020275	-	72	52.128	Astyanax_mexicanus
ENSMUSG00000055884	Fancm	98	81.306	ENSBTAG00000002612	FANCM	95	81.742	Bos_taurus
ENSMUSG00000055884	Fancm	98	79.940	ENSCJAG00000015945	FANCM	99	63.201	Callithrix_jacchus
ENSMUSG00000055884	Fancm	98	81.259	ENSCAFG00000014062	FANCM	99	62.421	Canis_familiaris
ENSMUSG00000055884	Fancm	98	81.325	ENSCAFG00020022069	-	99	81.325	Canis_lupus_dingo
ENSMUSG00000055884	Fancm	98	80.861	ENSCHIG00000015176	FANCM	100	62.850	Capra_hircus
ENSMUSG00000055884	Fancm	88	85.448	ENSTSYG00000036497	-	89	85.329	Carlito_syrichta
ENSMUSG00000055884	Fancm	98	81.776	ENSCPOG00000001446	FANCM	100	62.222	Cavia_porcellus
ENSMUSG00000055884	Fancm	98	81.287	ENSCCAG00000026593	FANCM	99	62.064	Cebus_capucinus
ENSMUSG00000055884	Fancm	98	81.886	ENSCATG00000031379	FANCM	99	63.435	Cercocebus_atys
ENSMUSG00000055884	Fancm	98	82.036	ENSCSAG00000015308	FANCM	99	63.628	Chlorocebus_sabaeus
ENSMUSG00000055884	Fancm	85	72.781	ENSCHOG00000000190	FANCM	79	72.781	Choloepus_hoffmanni
ENSMUSG00000055884	Fancm	97	68.601	ENSCPBG00000015089	FANCM	100	45.582	Chrysemys_picta_bellii
ENSMUSG00000055884	Fancm	98	82.036	ENSCANG00000029498	FANCM	99	63.531	Colobus_angolensis_palliatus
ENSMUSG00000055884	Fancm	98	90.214	ENSCGRG00001023573	Fancm	100	74.815	Cricetulus_griseus_chok1gshd
ENSMUSG00000055884	Fancm	89	65.482	ENSCSEG00000002313	-	76	56.798	Cynoglossus_semilaevis
ENSMUSG00000055884	Fancm	86	64.223	ENSCVAG00000015579	-	64	57.584	Cyprinodon_variegatus
ENSMUSG00000055884	Fancm	98	80.357	ENSDNOG00000007697	FANCM	99	59.962	Dasypus_novemcinctus
ENSMUSG00000055884	Fancm	98	82.290	ENSDORG00000010095	Fancm	99	62.027	Dipodomys_ordii
ENSMUSG00000055884	Fancm	80	82.199	ENSETEG00000003360	FANCM	81	75.758	Echinops_telfairi
ENSMUSG00000055884	Fancm	99	80.271	ENSEASG00005007781	FANCM	98	82.629	Equus_asinus_asinus
ENSMUSG00000055884	Fancm	98	80.030	ENSECAG00000018694	FANCM	88	64.602	Equus_caballus
ENSMUSG00000055884	Fancm	89	53.613	ENSEEUG00000005607	-	92	46.880	Erinaceus_europaeus
ENSMUSG00000055884	Fancm	95	62.500	ENSELUG00000015761	-	90	44.969	Esox_lucius
ENSMUSG00000055884	Fancm	98	81.493	ENSFCAG00000022146	-	100	81.399	Felis_catus
ENSMUSG00000055884	Fancm	86	67.698	ENSFALG00000001703	FANCM	100	42.699	Ficedula_albicollis
ENSMUSG00000055884	Fancm	100	78.947	ENSFDAG00000009043	FANCM	100	61.311	Fukomys_damarensis
ENSMUSG00000055884	Fancm	80	73.643	ENSFHEG00000006371	-	88	73.643	Fundulus_heteroclitus
ENSMUSG00000055884	Fancm	95	63.208	ENSGMOG00000002019	-	76	57.553	Gadus_morhua
ENSMUSG00000055884	Fancm	87	70.528	ENSGALG00000031182	FANCM	99	43.686	Gallus_gallus
ENSMUSG00000055884	Fancm	95	60.742	ENSGACG00000009448	-	94	53.618	Gasterosteus_aculeatus
ENSMUSG00000055884	Fancm	51	58.146	ENSGAGG00000007068	-	92	62.079	Gopherus_agassizii
ENSMUSG00000055884	Fancm	98	82.186	ENSGGOG00000008546	FANCM	99	63.869	Gorilla_gorilla
ENSMUSG00000055884	Fancm	95	57.363	ENSHBUG00000007085	-	71	52.131	Haplochromis_burtoni
ENSMUSG00000055884	Fancm	96	82.181	ENSHGLG00000013787	FANCM	100	62.258	Heterocephalus_glaber_female
ENSMUSG00000055884	Fancm	96	82.181	ENSHGLG00100006377	FANCM	100	62.209	Heterocephalus_glaber_male
ENSMUSG00000055884	Fancm	95	61.310	ENSHCOG00000013769	-	99	59.467	Hippocampus_comes
ENSMUSG00000055884	Fancm	98	56.303	ENSIPUG00000014629	fancm	88	54.930	Ictalurus_punctatus
ENSMUSG00000055884	Fancm	51	53.511	ENSKMAG00000009391	-	99	53.511	Kryptolebias_marmoratus
ENSMUSG00000055884	Fancm	97	56.983	ENSLBEG00000004982	-	79	47.254	Labrus_bergylta
ENSMUSG00000055884	Fancm	96	68.558	ENSLACG00000007739	FANCM	99	43.464	Latimeria_chalumnae
ENSMUSG00000055884	Fancm	95	64.902	ENSLOCG00000011318	FANCM	91	46.183	Lepisosteus_oculatus
ENSMUSG00000055884	Fancm	98	80.328	ENSLAFG00000001136	FANCM	100	63.015	Loxodonta_africana
ENSMUSG00000055884	Fancm	98	81.886	ENSMFAG00000000383	FANCM	99	63.338	Macaca_fascicularis
ENSMUSG00000055884	Fancm	98	81.886	ENSMMUG00000016513	FANCM	99	63.290	Macaca_mulatta
ENSMUSG00000055884	Fancm	98	81.737	ENSMNEG00000038659	FANCM	99	63.386	Macaca_nemestrina
ENSMUSG00000055884	Fancm	91	82.266	ENSMLEG00000035743	FANCM	99	73.671	Mandrillus_leucophaeus
ENSMUSG00000055884	Fancm	98	56.831	ENSMAMG00000007087	-	77	54.239	Mastacembelus_armatus
ENSMUSG00000055884	Fancm	95	57.644	ENSMZEG00005004644	-	80	52.350	Maylandia_zebra
ENSMUSG00000055884	Fancm	98	82.290	ENSMAUG00000015450	Fancm	100	72.343	Mesocricetus_auratus
ENSMUSG00000055884	Fancm	98	81.886	ENSMICG00000005811	FANCM	99	63.341	Microcebus_murinus
ENSMUSG00000055884	Fancm	98	87.215	ENSMOCG00000008775	Fancm	100	72.187	Microtus_ochrogaster
ENSMUSG00000055884	Fancm	88	63.636	ENSMMOG00000010215	-	67	57.938	Mola_mola
ENSMUSG00000055884	Fancm	98	71.935	ENSMODG00000007334	FANCM	99	49.186	Monodelphis_domestica
ENSMUSG00000055884	Fancm	98	98.000	MGP_CAROLIEiJ_G0017791	Fancm	100	93.667	Mus_caroli
ENSMUSG00000055884	Fancm	98	91.463	MGP_PahariEiJ_G0029547	Fancm	100	88.768	Mus_pahari
ENSMUSG00000055884	Fancm	100	97.578	MGP_SPRETEiJ_G0018636	Fancm	100	97.578	Mus_spretus
ENSMUSG00000055884	Fancm	98	80.746	ENSMPUG00000004849	FANCM	99	61.598	Mustela_putorius_furo
ENSMUSG00000055884	Fancm	98	79.104	ENSMLUG00000006671	FANCM	100	61.598	Myotis_lucifugus
ENSMUSG00000055884	Fancm	99	85.347	ENSNGAG00000017199	Fancm	99	69.653	Nannospalax_galili
ENSMUSG00000055884	Fancm	98	82.335	ENSNLEG00000004432	FANCM	99	64.058	Nomascus_leucogenys
ENSMUSG00000055884	Fancm	87	62.437	ENSMEUG00000004977	-	71	62.771	Notamacropus_eugenii
ENSMUSG00000055884	Fancm	95	62.519	ENSONIG00000003531	-	79	57.108	Oreochromis_niloticus
ENSMUSG00000055884	Fancm	83	74.460	ENSOANG00000013997	FANCM	99	48.480	Ornithorhynchus_anatinus
ENSMUSG00000055884	Fancm	98	81.437	ENSOCUG00000007539	FANCM	99	62.086	Oryctolagus_cuniculus
ENSMUSG00000055884	Fancm	95	57.486	ENSORLG00000014503	-	73	53.659	Oryzias_latipes
ENSMUSG00000055884	Fancm	95	57.709	ENSORLG00020013516	-	73	53.953	Oryzias_latipes_hni
ENSMUSG00000055884	Fancm	95	57.790	ENSORLG00015012100	-	73	53.900	Oryzias_latipes_hsok
ENSMUSG00000055884	Fancm	95	59.222	ENSOMEG00000010717	-	76	55.000	Oryzias_melastigma
ENSMUSG00000055884	Fancm	97	81.928	ENSOGAG00000003015	FANCM	100	62.494	Otolemur_garnettii
ENSMUSG00000055884	Fancm	98	81.009	ENSOARG00000009429	FANCM	100	62.741	Ovis_aries
ENSMUSG00000055884	Fancm	98	82.335	ENSPPAG00000028944	FANCM	99	64.110	Pan_paniscus
ENSMUSG00000055884	Fancm	98	81.073	ENSPPRG00000011952	-	100	80.981	Panthera_pardus
ENSMUSG00000055884	Fancm	98	80.924	ENSPTIG00000018621	-	100	80.832	Panthera_tigris_altaica
ENSMUSG00000055884	Fancm	98	82.036	ENSPTRG00000006307	FANCM	99	64.158	Pan_troglodytes
ENSMUSG00000055884	Fancm	98	81.886	ENSPANG00000023200	FANCM	99	63.290	Papio_anubis
ENSMUSG00000055884	Fancm	51	57.393	ENSPKIG00000000861	-	92	58.145	Paramormyrops_kingsleyae
ENSMUSG00000055884	Fancm	98	88.754	ENSPEMG00000005619	Fancm	100	73.904	Peromyscus_maniculatus_bairdii
ENSMUSG00000055884	Fancm	97	72.879	ENSPCIG00000005354	-	98	73.182	Phascolarctos_cinereus
ENSMUSG00000055884	Fancm	95	60.308	ENSPFOG00000002008	-	75	60.140	Poecilia_formosa
ENSMUSG00000055884	Fancm	95	57.649	ENSPLAG00000014164	-	78	52.355	Poecilia_latipinna
ENSMUSG00000055884	Fancm	95	57.627	ENSPMEG00000010746	-	78	52.240	Poecilia_mexicana
ENSMUSG00000055884	Fancm	95	57.365	ENSPREG00000019849	-	78	52.245	Poecilia_reticulata
ENSMUSG00000055884	Fancm	98	82.784	ENSPPYG00000005781	FANCM	98	67.699	Pongo_abelii
ENSMUSG00000055884	Fancm	80	83.684	ENSPCAG00000011363	-	69	70.359	Procavia_capensis
ENSMUSG00000055884	Fancm	93	77.059	ENSPCOG00000014388	FANCM	98	77.647	Propithecus_coquereli
ENSMUSG00000055884	Fancm	86	80.609	ENSPVAG00000015802	FANCM	69	75.862	Pteropus_vampyrus
ENSMUSG00000055884	Fancm	95	54.208	ENSPNAG00000013558	-	91	50.058	Pygocentrus_nattereri
ENSMUSG00000055884	Fancm	98	92.661	ENSRNOG00000056721	Fancm	100	87.438	Rattus_norvegicus
ENSMUSG00000055884	Fancm	98	80.448	ENSRBIG00000011451	FANCM	99	63.097	Rhinopithecus_bieti
ENSMUSG00000055884	Fancm	98	81.437	ENSRROG00000028917	FANCM	99	63.628	Rhinopithecus_roxellana
ENSMUSG00000055884	Fancm	85	31.250	YIR002C	-	60	31.369	Saccharomyces_cerevisiae
ENSMUSG00000055884	Fancm	98	81.138	ENSSBOG00000030882	FANCM	99	63.364	Saimiri_boliviensis_boliviensis
ENSMUSG00000055884	Fancm	97	71.131	ENSSHAG00000000507	FANCM	100	49.093	Sarcophilus_harrisii
ENSMUSG00000055884	Fancm	86	67.071	ENSSMAG00000019903	-	99	52.812	Scophthalmus_maximus
ENSMUSG00000055884	Fancm	95	63.333	ENSSDUG00000016682	-	98	61.145	Seriola_dumerili
ENSMUSG00000055884	Fancm	95	58.840	ENSSLDG00000003408	-	86	47.529	Seriola_lalandi_dorsalis
ENSMUSG00000055884	Fancm	88	78.691	ENSSARG00000002618	FANCM	80	79.362	Sorex_araneus
ENSMUSG00000055884	Fancm	98	79.321	ENSSSCG00000005000	FANCM	99	61.420	Sus_scrofa
ENSMUSG00000055884	Fancm	88	69.374	ENSTGUG00000013226	-	100	65.475	Taeniopygia_guttata
ENSMUSG00000055884	Fancm	95	63.349	ENSTRUG00000009756	-	97	62.519	Takifugu_rubripes
ENSMUSG00000055884	Fancm	95	63.240	ENSTNIG00000017277	-	87	58.854	Tetraodon_nigroviridis
ENSMUSG00000055884	Fancm	98	79.641	ENSTTRG00000006669	FANCM	99	62.954	Tursiops_truncatus
ENSMUSG00000055884	Fancm	99	80.088	ENSUMAG00000007704	-	98	80.088	Ursus_maritimus
ENSMUSG00000055884	Fancm	85	83.478	ENSVPAG00000005763	FANCM	72	82.000	Vicugna_pacos
ENSMUSG00000055884	Fancm	98	80.960	ENSVVUG00000000357	FANCM	99	62.913	Vulpes_vulpes
ENSMUSG00000055884	Fancm	68	68.860	ENSXETG00000003046	fancm	100	68.860	Xenopus_tropicalis
ENSMUSG00000055884	Fancm	95	57.021	ENSXMAG00000007702	-	82	53.731	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000712	resolution of meiotic recombination intermediates	-	ISO	Process
GO:0003677	DNA binding	-	IEA	Function
GO:0003682	chromatin binding	-	ISO	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0004518	nuclease activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0006281	DNA repair	-	IEA	Process
GO:0006974	cellular response to DNA damage stimulus	-	IEA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0031297	replication fork processing	-	ISO	Process
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	-	IEA	Function
GO:0043240	Fanconi anaemia nuclear complex	-	ISO	Component
GO:0071821	FANCM-MHF complex	-	ISO	Component
GO:1902527	positive regulation of protein monoubiquitination	-	ISO	Process