EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000056076 (Gene tree)
Gene ID
27979
Gene Symbol
Eif3b
Alias
D5Wsu45e|EIF3-P116|Eif3s9
Full Name
eukaryotic translation initiation factor 3%2C subunit B
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Plus strand
Length
24033 bases
Position
chr5:140419328-140443360
Accession
106478
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000098076RRM_1PF00076.226.1e-0711
ENSMUSP00000098076eIF2APF08662.118.3e-7211
ENSMUSP00000143425eIF2APF08662.113.8e-1911
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27768875High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem CellsnIC & mESC2016.09He CDOI: 10.1016/j.molcel.2016.09.034
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000197632-600--- (aa)--
ENSMUST00000199377-596-ENSMUSP00000143425175 (aa)-A0A0G2JG48
ENSMUST00000100507-2945-ENSMUSP00000098076803 (aa)-Q8JZQ9
Gene Model
Click here to download ENSMUSG00000056076's gene model file
Pathways
Pathway IDPathway NameSource
mmu03013RNA transportKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000056076's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000056076Eif3b9997.126ENSG00000106263EIF3B10099.346Homo_sapiens
ENSMUSG00000056076Eif3b9888.304ENSAPOG00000002297eif3bb9887.669Acanthochromis_polyacanthus
ENSMUSG00000056076Eif3b9996.552ENSAMEG00000016131-9296.029Ailuropoda_melanoleuca
ENSMUSG00000056076Eif3b9887.719ENSACIG00000015396eif3bb9887.820Amphilophus_citrinellus
ENSMUSG00000056076Eif3b9887.719ENSAOCG00000010921eif3bb9887.519Amphiprion_ocellaris
ENSMUSG00000056076Eif3b9887.719ENSAPEG00000000844eif3bb9887.519Amphiprion_percula
ENSMUSG00000056076Eif3b9887.135ENSATEG00000008626eif3bb9887.218Anabas_testudineus
ENSMUSG00000056076Eif3b9990.230ENSAPLG00000016062EIF3B10093.519Anas_platyrhynchos
ENSMUSG00000056076Eif3b9691.071ENSACAG00000008874-8682.005Anolis_carolinensis
ENSMUSG00000056076Eif3b9997.126ENSANAG00000020360EIF3B10090.629Aotus_nancymaae
ENSMUSG00000056076Eif3b9885.965ENSACLG00000000870eif3bb9886.767Astatotilapia_calliptera
ENSMUSG00000056076Eif3b9883.041ENSAMXG00000009773eif3ba9886.547Astyanax_mexicanus
ENSMUSG00000056076Eif3b9996.552ENSBTAG00000007474EIF3B10088.667Bos_taurus
ENSMUSG00000056076Eif3b9939.205WBGene00001225eif-3.B9834.222Caenorhabditis_elegans
ENSMUSG00000056076Eif3b9997.126ENSCJAG00000001442EIF3B10090.074Callithrix_jacchus
ENSMUSG00000056076Eif3b9996.552ENSCAFG00000016418EIF3B9788.543Canis_familiaris
ENSMUSG00000056076Eif3b9996.552ENSCAFG00020020771EIF3B10085.928Canis_lupus_dingo
ENSMUSG00000056076Eif3b9996.552ENSCHIG00000009941EIF3B10089.415Capra_hircus
ENSMUSG00000056076Eif3b9997.126ENSTSYG00000008256EIF3B9993.908Carlito_syrichta
ENSMUSG00000056076Eif3b9996.552ENSCAPG00000009347-9891.049Cavia_aperea
ENSMUSG00000056076Eif3b9996.552ENSCAPG00000006394-9985.646Cavia_aperea
ENSMUSG00000056076Eif3b9996.552ENSCPOG00000031410-10089.303Cavia_porcellus
ENSMUSG00000056076Eif3b9996.552ENSCPOG00000012541-10090.411Cavia_porcellus
ENSMUSG00000056076Eif3b9997.126ENSCCAG00000021556EIF3B9698.799Cebus_capucinus
ENSMUSG00000056076Eif3b9997.126ENSCATG00000040107EIF3B10090.809Cercocebus_atys
ENSMUSG00000056076Eif3b9996.552ENSCLAG00000006140EIF3B10091.034Chinchilla_lanigera
ENSMUSG00000056076Eif3b9997.126ENSCSAG00000017603EIF3B10084.521Chlorocebus_sabaeus
ENSMUSG00000056076Eif3b5293.407ENSCHOG00000006142-59100.000Choloepus_hoffmanni
ENSMUSG00000056076Eif3b9989.655ENSCPBG00000020654EIF3B9982.570Chrysemys_picta_bellii
ENSMUSG00000056076Eif3b9157.233ENSCING00000003620-9660.651Ciona_intestinalis
ENSMUSG00000056076Eif3b9997.126ENSCANG00000042097EIF3B10097.688Colobus_angolensis_palliatus
ENSMUSG00000056076Eif3b9999.425ENSCGRG00001019278Eif3b10097.136Cricetulus_griseus_chok1gshd
ENSMUSG00000056076Eif3b9999.425ENSCGRG00000004618Eif3b10096.887Cricetulus_griseus_crigri
ENSMUSG00000056076Eif3b9886.550ENSCSEG00000020931eif3bb9885.865Cynoglossus_semilaevis
ENSMUSG00000056076Eif3b9888.889ENSCVAG00000015650eif3bb9887.669Cyprinodon_variegatus
ENSMUSG00000056076Eif3b9884.211ENSDARG00000059654eif3ba9985.588Danio_rerio
ENSMUSG00000056076Eif3b9983.908ENSDARG00000074213eif3bb10085.629Danio_rerio
ENSMUSG00000056076Eif3b9997.701ENSDNOG00000049572EIF3B10088.000Dasypus_novemcinctus
ENSMUSG00000056076Eif3b9997.126ENSDORG00000001401Eif3b10087.313Dipodomys_ordii
ENSMUSG00000056076Eif3b9750.588FBgn0034237eIF3b9950.499Drosophila_melanogaster
ENSMUSG00000056076Eif3b9794.675ENSETEG00000001719EIF3B9994.081Echinops_telfairi
ENSMUSG00000056076Eif3b9470.122ENSEBUG00000004379eif3bb9973.538Eptatretus_burgeri
ENSMUSG00000056076Eif3b9997.126ENSEASG00005021167EIF3B10089.370Equus_asinus_asinus
ENSMUSG00000056076Eif3b9997.126ENSECAG00000013671EIF3B10088.999Equus_caballus
ENSMUSG00000056076Eif3b9696.429ENSEEUG00000014359EIF3B8895.531Erinaceus_europaeus
ENSMUSG00000056076Eif3b9885.965ENSELUG00000021762eif3bb9787.106Esox_lucius
ENSMUSG00000056076Eif3b9996.552ENSFCAG00000005392EIF3B9289.740Felis_catus
ENSMUSG00000056076Eif3b9990.230ENSFALG00000013907EIF3B9988.138Ficedula_albicollis
ENSMUSG00000056076Eif3b9996.552ENSFDAG00000007558EIF3B9692.267Fukomys_damarensis
ENSMUSG00000056076Eif3b9887.135ENSFHEG00000002563eif3bb9887.368Fundulus_heteroclitus
ENSMUSG00000056076Eif3b9883.626ENSGMOG00000006100eif3bb9882.485Gadus_morhua
ENSMUSG00000056076Eif3b9990.230ENSGALG00000040999EIF3B9683.461Gallus_gallus
ENSMUSG00000056076Eif3b5993.269ENSGAFG00000004114eif3bb8793.575Gambusia_affinis
ENSMUSG00000056076Eif3b9884.795ENSGACG00000016738eif3bb9885.821Gasterosteus_aculeatus
ENSMUSG00000056076Eif3b9990.805ENSGAGG00000003659EIF3B9584.737Gopherus_agassizii
ENSMUSG00000056076Eif3b9997.126ENSGGOG00000016291EIF3B9895.670Gorilla_gorilla
ENSMUSG00000056076Eif3b9885.965ENSHBUG00000019329eif3bb9886.767Haplochromis_burtoni
ENSMUSG00000056076Eif3b9994.828ENSHGLG00000015253EIF3B10090.411Heterocephalus_glaber_female
ENSMUSG00000056076Eif3b9994.828ENSHGLG00100015005EIF3B9194.796Heterocephalus_glaber_male
ENSMUSG00000056076Eif3b9884.795ENSHCOG00000020583eif3bb9886.957Hippocampus_comes
ENSMUSG00000056076Eif3b9885.965ENSIPUG00000018347eif3b9887.444Ictalurus_punctatus
ENSMUSG00000056076Eif3b9997.701ENSSTOG00000021545EIF3B10095.417Ictidomys_tridecemlineatus
ENSMUSG00000056076Eif3b9997.126ENSJJAG00000014658Eif3b10093.112Jaculus_jaculus
ENSMUSG00000056076Eif3b9887.135ENSKMAG00000007432eif3bb9886.617Kryptolebias_marmoratus
ENSMUSG00000056076Eif3b9887.135ENSLBEG00000005233eif3bb9887.970Labrus_bergylta
ENSMUSG00000056076Eif3b9989.655ENSLACG00000010357EIF3B9890.269Latimeria_chalumnae
ENSMUSG00000056076Eif3b9888.889ENSLOCG00000004215eif3bb9988.987Lepisosteus_oculatus
ENSMUSG00000056076Eif3b9996.552ENSLAFG00000001540EIF3B10088.287Loxodonta_africana
ENSMUSG00000056076Eif3b9997.126ENSMFAG00000046100EIF3B10089.370Macaca_fascicularis
ENSMUSG00000056076Eif3b9997.126ENSMMUG00000015529EIF3B10089.903Macaca_mulatta
ENSMUSG00000056076Eif3b9997.126ENSMNEG00000042021EIF3B10090.465Macaca_nemestrina
ENSMUSG00000056076Eif3b9997.126ENSMLEG00000042295EIF3B10098.512Mandrillus_leucophaeus
ENSMUSG00000056076Eif3b9887.135ENSMAMG00000008654eif3bb9887.669Mastacembelus_armatus
ENSMUSG00000056076Eif3b9885.965ENSMZEG00005011827eif3bb9886.767Maylandia_zebra
ENSMUSG00000056076Eif3b9990.230ENSMGAG00000002719EIF3B10093.519Meleagris_gallopavo
ENSMUSG00000056076Eif3b9999.425ENSMAUG00000020259Eif3b10096.887Mesocricetus_auratus
ENSMUSG00000056076Eif3b9997.126ENSMICG00000010103EIF3B10090.000Microcebus_murinus
ENSMUSG00000056076Eif3b99100.000ENSMOCG00000000390Eif3b10098.007Microtus_ochrogaster
ENSMUSG00000056076Eif3b9888.304ENSMMOG00000003655eif3bb9887.970Mola_mola
ENSMUSG00000056076Eif3b9996.552ENSMODG00000009778EIF3B10084.167Monodelphis_domestica
ENSMUSG00000056076Eif3b9887.719ENSMALG00000002494eif3bb9979.882Monopterus_albus
ENSMUSG00000056076Eif3b10099.875MGP_CAROLIEiJ_G0027948Eif3b100100.000Mus_caroli
ENSMUSG00000056076Eif3b99100.000MGP_PahariEiJ_G0024520Eif3b100100.000Mus_pahari
ENSMUSG00000056076Eif3b10099.751MGP_SPRETEiJ_G0028952Eif3b100100.000Mus_spretus
ENSMUSG00000056076Eif3b9996.552ENSMPUG00000017919EIF3B9996.799Mustela_putorius_furo
ENSMUSG00000056076Eif3b9997.701ENSMLUG00000013740EIF3B9997.329Myotis_lucifugus
ENSMUSG00000056076Eif3b9997.701ENSNGAG00000016188Eif3b10093.665Nannospalax_galili
ENSMUSG00000056076Eif3b9887.135ENSNBRG00000008582eif3bb9789.377Neolamprologus_brichardi
ENSMUSG00000056076Eif3b9997.126ENSNLEG00000008647EIF3B9981.761Nomascus_leucogenys
ENSMUSG00000056076Eif3b9797.041ENSMEUG00000000880EIF3B7097.458Notamacropus_eugenii
ENSMUSG00000056076Eif3b9795.266ENSOPRG00000014504EIF3B9993.458Ochotona_princeps
ENSMUSG00000056076Eif3b9996.552ENSODEG00000012851EIF3B9880.822Octodon_degus
ENSMUSG00000056076Eif3b9887.135ENSONIG00000003283eif3bb9887.218Oreochromis_niloticus
ENSMUSG00000056076Eif3b9995.402ENSOANG00000004314EIF3B9997.171Ornithorhynchus_anatinus
ENSMUSG00000056076Eif3b9995.977ENSOCUG00000010289EIF3B10097.496Oryctolagus_cuniculus
ENSMUSG00000056076Eif3b9785.882ENSORLG00000008861eif3bb9886.807Oryzias_latipes
ENSMUSG00000056076Eif3b9785.882ENSORLG00020012732eif3bb9886.807Oryzias_latipes_hni
ENSMUSG00000056076Eif3b9785.882ENSORLG00015000357eif3bb9886.807Oryzias_latipes_hsok
ENSMUSG00000056076Eif3b9784.118ENSOMEG00000017895eif3bb9886.145Oryzias_melastigma
ENSMUSG00000056076Eif3b9997.126ENSOGAG00000006319EIF3B9988.435Otolemur_garnettii
ENSMUSG00000056076Eif3b8491.272ENSOARG00000005137EIF3B9889.899Ovis_aries
ENSMUSG00000056076Eif3b9997.126ENSPPAG00000032833EIF3B10096.165Pan_paniscus
ENSMUSG00000056076Eif3b9996.552ENSPPRG00000003071EIF3B10088.917Panthera_pardus
ENSMUSG00000056076Eif3b9996.552ENSPTIG00000013328EIF3B8397.840Panthera_tigris_altaica
ENSMUSG00000056076Eif3b9997.126ENSPTRG00000018860EIF3B10090.931Pan_troglodytes
ENSMUSG00000056076Eif3b9997.126ENSPTRG00000046041-10090.931Pan_troglodytes
ENSMUSG00000056076Eif3b9997.126ENSPANG00000014557EIF3B10089.493Papio_anubis
ENSMUSG00000056076Eif3b9884.795ENSPKIG00000011735eif3bb9987.574Paramormyrops_kingsleyae
ENSMUSG00000056076Eif3b9884.211ENSPKIG00000009981eif3ba9888.527Paramormyrops_kingsleyae
ENSMUSG00000056076Eif3b9990.230ENSPSIG00000009889EIF3B9689.571Pelodiscus_sinensis
ENSMUSG00000056076Eif3b9888.889ENSPMGG00000016466eif3bb9987.519Periophthalmus_magnuspinnatus
ENSMUSG00000056076Eif3b9999.425ENSPEMG00000021554Eif3b10097.385Peromyscus_maniculatus_bairdii
ENSMUSG00000056076Eif3b8075.975ENSPMAG00000005331eif3bb9975.975Petromyzon_marinus
ENSMUSG00000056076Eif3b9996.552ENSPCIG00000009464EIF3B9897.685Phascolarctos_cinereus
ENSMUSG00000056076Eif3b9889.474ENSPFOG00000001449eif3bb9888.271Poecilia_formosa
ENSMUSG00000056076Eif3b9889.474ENSPLAG00000005120eif3bb9883.008Poecilia_latipinna
ENSMUSG00000056076Eif3b9888.889ENSPMEG00000015157eif3bb9988.120Poecilia_mexicana
ENSMUSG00000056076Eif3b9888.889ENSPREG00000006422eif3bb9888.271Poecilia_reticulata
ENSMUSG00000056076Eif3b9797.633ENSPPYG00000017313EIF3B9390.752Pongo_abelii
ENSMUSG00000056076Eif3b7696.241ENSPCAG00000010455-7098.969Procavia_capensis
ENSMUSG00000056076Eif3b9997.126ENSPCOG00000025894EIF3B10090.061Propithecus_coquereli
ENSMUSG00000056076Eif3b9797.633ENSPVAG00000013735EIF3B9297.664Pteropus_vampyrus
ENSMUSG00000056076Eif3b8274.130ENSPNYG00000014859eif3bb9873.985Pundamilia_nyererei
ENSMUSG00000056076Eif3b9885.380ENSPNAG00000021677eif3ba9887.444Pygocentrus_nattereri
ENSMUSG00000056076Eif3b99100.000ENSRNOG00000001253Eif3b10098.381Rattus_norvegicus
ENSMUSG00000056076Eif3b9997.126ENSRBIG00000030590EIF3B9498.609Rhinopithecus_bieti
ENSMUSG00000056076Eif3b9997.126ENSRROG00000035023EIF3B10090.809Rhinopithecus_roxellana
ENSMUSG00000056076Eif3b7331.756YOR361CPRT18531.756Saccharomyces_cerevisiae
ENSMUSG00000056076Eif3b9997.126ENSSBOG00000001954EIF3B9791.839Saimiri_boliviensis_boliviensis
ENSMUSG00000056076Eif3b9996.552ENSSHAG00000001063EIF3B10085.114Sarcophilus_harrisii
ENSMUSG00000056076Eif3b9886.550ENSSFOG00015006390eif3bb9888.872Scleropages_formosus
ENSMUSG00000056076Eif3b9884.795ENSSFOG00015005824eif3ba9888.191Scleropages_formosus
ENSMUSG00000056076Eif3b9884.795ENSSMAG00000021264eif3bb9885.865Scophthalmus_maximus
ENSMUSG00000056076Eif3b9887.719ENSSDUG00000016761eif3bb9887.820Seriola_dumerili
ENSMUSG00000056076Eif3b9887.719ENSSLDG00000022874eif3bb9887.669Seriola_lalandi_dorsalis
ENSMUSG00000056076Eif3b9795.858ENSSARG00000006036EIF3B9997.040Sorex_araneus
ENSMUSG00000056076Eif3b9987.931ENSSPUG00000001870EIF3B9993.210Sphenodon_punctatus
ENSMUSG00000056076Eif3b9888.304ENSSPAG00000013403eif3bb9887.820Stegastes_partitus
ENSMUSG00000056076Eif3b9996.552ENSSSCG00000039390EIF3B10087.886Sus_scrofa
ENSMUSG00000056076Eif3b9986.441ENSTGUG00000008140EIF3B10092.078Taeniopygia_guttata
ENSMUSG00000056076Eif3b9885.380ENSTRUG00000011064eif3bb9887.519Takifugu_rubripes
ENSMUSG00000056076Eif3b9886.550ENSTNIG00000004648eif3bb9986.507Tetraodon_nigroviridis
ENSMUSG00000056076Eif3b9794.675ENSTBEG00000012836EIF3B9379.162Tupaia_belangeri
ENSMUSG00000056076Eif3b9795.858ENSTTRG00000014713EIF3B9278.321Tursiops_truncatus
ENSMUSG00000056076Eif3b9996.552ENSUAMG00000000800EIF3B9996.951Ursus_americanus
ENSMUSG00000056076Eif3b9996.552ENSUMAG00000007200EIF3B10097.940Ursus_maritimus
ENSMUSG00000056076Eif3b9996.552ENSVVUG00000004280EIF3B10097.943Vulpes_vulpes
ENSMUSG00000056076Eif3b9788.824ENSXETG00000020593eif3b9988.576Xenopus_tropicalis
ENSMUSG00000056076Eif3b9887.135ENSXCOG00000008279eif3bb9886.466Xiphophorus_couchianus
ENSMUSG00000056076Eif3b9887.719ENSXMAG00000004705eif3bb9886.617Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding-ISOFunction
GO:0003743translation initiation factor activity21873635.IBAFunction
GO:0003743translation initiation factor activity17581632.IDAFunction
GO:0003743translation initiation factor activity-ISOFunction
GO:0003743translation initiation factor activity-ISOFunction
GO:0005515protein binding16541103.IPIFunction
GO:0005737cytoplasm-IEAComponent
GO:0005852eukaryotic translation initiation factor 3 complex21873635.IBAComponent
GO:0005852eukaryotic translation initiation factor 3 complex17581632.IDAComponent
GO:0005852eukaryotic translation initiation factor 3 complex-ISOComponent
GO:0006412translation-IEAProcess
GO:0006413translational initiation21873635.IBAProcess
GO:0006413translational initiation17581632.IDAProcess
GO:0006413translational initiation-ISOProcess
GO:0006446regulation of translational initiation-ISOProcess
GO:0031369translation initiation factor binding-IEAFunction
GO:0045202synapse16452087.EXPComponent
GO:0045202synapse16452087.IDAComponent
GO:0071541eukaryotic translation initiation factor 3 complex, eIF3m24003236.IDAComponent
GO:0075522IRES-dependent viral translational initiation-ISOProcess
GO:0075525viral translational termination-reinitiation-ISOProcess

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