EuRBPDB

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  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000056201 (Gene tree)
Gene ID
12631
Gene Symbol
Cfl1
Alias
Cof|cofilin|n-cofilin
Full Name
cofilin 1%2C non-muscle
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Plus strand
Length
4747
Position
chr19: 5490455-5495201
Accession
101757
RBP type
non-canonical RBP
Summary
-
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27281784Identification of RNA binding Proteins in Macrophages by Interactome CaptureIC & RAW264.72016 Jun 8Liepelt ADOI: 10.1074/mcp.M115.056564
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000116560-1148-ENSMUSP00000112259227 (aa)-F8WGL3
ENSMUST00000209469-2354-ENSMUSP00000147514166 (aa)-P18760
Gene Model
Click here to download ENSMUSG00000056201's gene model file
Pathways
Pathway IDPathway NameSource
mmu04360Axon guidanceKEGG
mmu04666Fc gamma R-mediated phagocytosisKEGG
mmu04810Regulation of actin cytoskeletonKEGG
mmu05133PertussisKEGG
mmu05170Human immunodeficiency virus 1 infectionKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000056201's network
Orthologs identified by RBPome
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000056201Cfl19330.000WBGene00006794unc-609630.000Caenorhabditis_elegans
ENSMUSG00000056201Cfl18337.671FBgn0011726tsr9835.294Drosophila_melanogaster
ENSMUSG00000056201Cfl110098.795ENSG00000172757CFL110098.889Homo_sapiens
ENSMUSG00000056201Cfl18537.762YLL050CCOF18737.762Saccharomyces_cerevisiae
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000281mitotic cytokinesis15548599.IMPProcess
GO:0001755neural crest cell migration15649475.IMPProcess
GO:0001842neural fold formation15649475.IMPProcess
GO:0003779actin binding-ISOFunction
GO:0005102signaling receptor binding24052308.IPIFunction
GO:0005615extracellular space24006456.HDAComponent
GO:0005634nucleus-IEAComponent
GO:0005737cytoplasm15548599.IDAComponent
GO:0005737cytoplasm-ISOComponent
GO:0005856cytoskeleton-IEAComponent
GO:0005886plasma membrane-IEAComponent
GO:0005911cell-cell junction23793062.IDAComponent
GO:0005925focal adhesion29162887.ISOComponent
GO:0006468protein phosphorylation17018287.IDAProcess
GO:0006606protein import into nucleus-ISOProcess
GO:0007010cytoskeleton organization-ISOProcess
GO:0007015actin filament organization15606898.IMPProcess
GO:0007162negative regulation of cell adhesion-ISOProcess
GO:0010592positive regulation of lamellipodium assembly-ISOProcess
GO:0010593negative regulation of lamellipodium assembly-ISOProcess
GO:0015629actin cytoskeleton-IEAComponent
GO:0016020membrane-IEAComponent
GO:0019903protein phosphatase binding-ISOFunction
GO:0022604regulation of cell morphogenesis-ISOProcess
GO:0030010establishment of cell polarity15606898.IMPProcess
GO:0030027lamellipodium25107909.IDAComponent
GO:0030027lamellipodium-ISOComponent
GO:0030030cell projection organization16286931.ISOProcess
GO:0030042actin filament depolymerization11809832.IDAProcess
GO:0030042actin filament depolymerization-ISOProcess
GO:0030043actin filament fragmentation11809832.IDAProcess
GO:0030175filopodium-ISOComponent
GO:0030307positive regulation of cell growth-ISOProcess
GO:0030426growth cone-ISOComponent
GO:0030835negative regulation of actin filament depolymerization-ISOProcess
GO:0030836positive regulation of actin filament depolymerization23921380.IDAProcess
GO:0030836positive regulation of actin filament depolymerization15548599.IMPProcess
GO:0030864cortical actin cytoskeleton15004221.15548599.IDAComponent
GO:0031252cell leading edge-ISOComponent
GO:0031915positive regulation of synaptic plasticity-ISOProcess
GO:0031966mitochondrial membrane-ISOComponent
GO:0032232negative regulation of actin filament bundle assembly-ISOProcess
GO:0042995cell projection-IEAComponent
GO:0043005neuron projection-ISOComponent
GO:0043025neuronal cell body-ISOComponent
GO:0043197dendritic spine-ISOComponent
GO:0043200response to amino acid17018287.IDAProcess
GO:0044794positive regulation by host of viral process-ISOProcess
GO:0045792negative regulation of cell size16286931.ISOProcess
GO:0045862positive regulation of proteolysis-ISOProcess
GO:0051015actin filament binding11809832.IDAFunction
GO:0051015actin filament binding-ISOFunction
GO:0051511negative regulation of unidimensional cell growth-ISOProcess
GO:0051894positive regulation of focal adhesion assembly-ISOProcess
GO:0060999positive regulation of dendritic spine development-ISOProcess
GO:0061001regulation of dendritic spine morphogenesis-ISOProcess
GO:0070301cellular response to hydrogen peroxide-ISOProcess
GO:0071347cellular response to interleukin-1-ISOProcess
GO:0071354cellular response to interleukin-6-ISOProcess
GO:0071356cellular response to tumor necrosis factor-ISOProcess
GO:0071364cellular response to epidermal growth factor stimulus-ISOProcess
GO:0090732cofilin-actin rod-ISOComponent
GO:0097060synaptic membrane-ISOComponent
GO:0098885modification of postsynaptic actin cytoskeleton-ISOProcess
GO:0098978glutamatergic synapse-ISOComponent
GO:1902936phosphatidylinositol bisphosphate binding-ISOFunction
GO:1902951negative regulation of dendritic spine maintenance-ISOProcess
GO:1904783positive regulation of NMDA glutamate receptor activity-ISOProcess
GO:1905873positive regulation of protein localization to cell leading edge-ISOProcess
GO:1905875negative regulation of postsynaptic density organization-ISOProcess
GO:1990314cellular response to insulin-like growth factor stimulus-ISOProcess
GO:2000146negative regulation of cell motility-ISOProcess
GO:2000147positive regulation of cell motility-ISOProcess
GO:2000784positive regulation of establishment of cell polarity regulating cell shape-ISOProcess
GO:2000814positive regulation of barbed-end actin filament capping-ISOProcess

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