EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000057388 (Gene tree)
Gene ID: 67681
Gene Symbol: Mrpl18
Alias: 1010001C05Rik|HSPC071|MRP-L18
Full Name: mitochondrial ribosomal protein L18
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 4997 bases
Position: chr17:12911349-12916345
Accession: 1914931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000078123	Ribosomal_L18p	PF00861.22	1e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000162781	-	438	-	-	- (aa)	-	-
ENSMUST00000162978	-	446	-	-	- (aa)	-	-
ENSMUST00000079121	-	1219	XM_017317617	ENSMUSP00000078123	180 (aa)	XP_017173106	Q9CQL5
ENSMUST00000159765	-	224	-	-	- (aa)	-	-
ENSMUST00000162928	-	278	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000057388's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000057388's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000057388	Mrpl18	100	83.333	ENSG00000112110	MRPL18	100	83.333	Homo_sapiens
ENSMUSG00000057388	Mrpl18	83	54.667	ENSAPOG00000017712	mrpl18	80	54.422	Acanthochromis_polyacanthus
ENSMUSG00000057388	Mrpl18	100	81.667	ENSAMEG00000015398	MRPL18	100	81.667	Ailuropoda_melanoleuca
ENSMUSG00000057388	Mrpl18	84	50.327	ENSACIG00000015656	mrpl18	81	50.327	Amphilophus_citrinellus
ENSMUSG00000057388	Mrpl18	84	52.941	ENSAOCG00000001512	mrpl18	81	52.941	Amphiprion_ocellaris
ENSMUSG00000057388	Mrpl18	84	52.941	ENSAPEG00000016043	mrpl18	81	52.941	Amphiprion_percula
ENSMUSG00000057388	Mrpl18	92	47.904	ENSATEG00000008920	mrpl18	88	49.102	Anabas_testudineus
ENSMUSG00000057388	Mrpl18	99	57.754	ENSACAG00000004244	MRPL18	99	57.754	Anolis_carolinensis
ENSMUSG00000057388	Mrpl18	100	83.333	ENSANAG00000033398	MRPL18	100	83.333	Aotus_nancymaae
ENSMUSG00000057388	Mrpl18	84	52.288	ENSACLG00000009463	mrpl18	81	52.288	Astatotilapia_calliptera
ENSMUSG00000057388	Mrpl18	88	47.500	ENSAMXG00000015697	mrpl18	87	49.020	Astyanax_mexicanus
ENSMUSG00000057388	Mrpl18	100	77.222	ENSBTAG00000001289	MRPL18	100	77.222	Bos_taurus
ENSMUSG00000057388	Mrpl18	100	83.333	ENSCJAG00000011859	MRPL18	100	83.333	Callithrix_jacchus
ENSMUSG00000057388	Mrpl18	100	78.351	ENSCAFG00000031434	MRPL18	100	78.351	Canis_familiaris
ENSMUSG00000057388	Mrpl18	100	83.333	ENSCAFG00020017736	MRPL18	100	83.333	Canis_lupus_dingo
ENSMUSG00000057388	Mrpl18	100	78.889	ENSCHIG00000023286	-	100	78.889	Capra_hircus
ENSMUSG00000057388	Mrpl18	90	80.247	ENSCHIG00000025460	-	92	80.247	Capra_hircus
ENSMUSG00000057388	Mrpl18	99	83.240	ENSTSYG00000005598	MRPL18	99	83.240	Carlito_syrichta
ENSMUSG00000057388	Mrpl18	90	64.198	ENSCAPG00000013467	MRPL18	100	64.198	Cavia_aperea
ENSMUSG00000057388	Mrpl18	91	84.756	ENSCPOG00000040103	MRPL18	80	84.756	Cavia_porcellus
ENSMUSG00000057388	Mrpl18	100	82.222	ENSCCAG00000027672	MRPL18	100	82.222	Cebus_capucinus
ENSMUSG00000057388	Mrpl18	100	82.222	ENSCATG00000039405	MRPL18	100	82.222	Cercocebus_atys
ENSMUSG00000057388	Mrpl18	100	74.359	ENSCLAG00000012045	MRPL18	100	74.359	Chinchilla_lanigera
ENSMUSG00000057388	Mrpl18	100	83.333	ENSCSAG00000012516	MRPL18	100	83.333	Chlorocebus_sabaeus
ENSMUSG00000057388	Mrpl18	100	83.333	ENSCANG00000042891	-	100	83.333	Colobus_angolensis_palliatus
ENSMUSG00000057388	Mrpl18	100	78.889	ENSCANG00000029771	-	100	78.889	Colobus_angolensis_palliatus
ENSMUSG00000057388	Mrpl18	100	89.444	ENSCGRG00001010667	Mrpl18	100	89.444	Cricetulus_griseus_chok1gshd
ENSMUSG00000057388	Mrpl18	100	89.444	ENSCGRG00000008991	Mrpl18	100	89.444	Cricetulus_griseus_crigri
ENSMUSG00000057388	Mrpl18	83	53.333	ENSCSEG00000010233	mrpl18	85	53.333	Cynoglossus_semilaevis
ENSMUSG00000057388	Mrpl18	84	52.941	ENSCVAG00000011944	mrpl18	81	52.941	Cyprinodon_variegatus
ENSMUSG00000057388	Mrpl18	100	83.889	ENSDNOG00000036148	MRPL18	100	83.889	Dasypus_novemcinctus
ENSMUSG00000057388	Mrpl18	100	79.444	ENSETEG00000007591	MRPL18	100	79.444	Echinops_telfairi
ENSMUSG00000057388	Mrpl18	89	79.503	ENSEASG00005019027	MRPL18	100	79.503	Equus_asinus_asinus
ENSMUSG00000057388	Mrpl18	100	80.000	ENSECAG00000012515	MRPL18	94	80.000	Equus_caballus
ENSMUSG00000057388	Mrpl18	82	50.336	ENSELUG00000004634	mrpl18	76	50.336	Esox_lucius
ENSMUSG00000057388	Mrpl18	100	82.778	ENSFCAG00000002847	MRPL18	100	82.778	Felis_catus
ENSMUSG00000057388	Mrpl18	100	80.000	ENSFDAG00000020747	-	100	80.000	Fukomys_damarensis
ENSMUSG00000057388	Mrpl18	94	68.391	ENSFDAG00000008643	-	99	68.391	Fukomys_damarensis
ENSMUSG00000057388	Mrpl18	73	51.515	ENSFHEG00000018829	mrpl18	69	51.938	Fundulus_heteroclitus
ENSMUSG00000057388	Mrpl18	89	49.068	ENSGMOG00000014691	mrpl18	99	49.068	Gadus_morhua
ENSMUSG00000057388	Mrpl18	84	49.673	ENSGAFG00000008982	mrpl18	81	49.673	Gambusia_affinis
ENSMUSG00000057388	Mrpl18	85	53.247	ENSGACG00000017971	mrpl18	90	53.896	Gasterosteus_aculeatus
ENSMUSG00000057388	Mrpl18	100	82.778	ENSGGOG00000014075	MRPL18	100	82.778	Gorilla_gorilla
ENSMUSG00000057388	Mrpl18	84	52.288	ENSHBUG00000008534	mrpl18	81	52.288	Haplochromis_burtoni
ENSMUSG00000057388	Mrpl18	100	81.667	ENSHGLG00000007214	-	100	81.667	Heterocephalus_glaber_female
ENSMUSG00000057388	Mrpl18	100	81.667	ENSHGLG00100017521	-	100	81.667	Heterocephalus_glaber_male
ENSMUSG00000057388	Mrpl18	83	49.333	ENSHCOG00000016737	mrpl18	78	49.333	Hippocampus_comes
ENSMUSG00000057388	Mrpl18	87	50.000	ENSIPUG00000003341	mrpl18	84	50.000	Ictalurus_punctatus
ENSMUSG00000057388	Mrpl18	100	81.667	ENSSTOG00000005583	MRPL18	100	81.667	Ictidomys_tridecemlineatus
ENSMUSG00000057388	Mrpl18	77	50.000	ENSKMAG00000010162	mrpl18	88	48.366	Kryptolebias_marmoratus
ENSMUSG00000057388	Mrpl18	84	52.288	ENSLBEG00000004268	mrpl18	81	52.288	Labrus_bergylta
ENSMUSG00000057388	Mrpl18	83	50.000	ENSLOCG00000008109	mrpl18	81	52.761	Lepisosteus_oculatus
ENSMUSG00000057388	Mrpl18	100	80.556	ENSLAFG00000002501	MRPL18	100	80.556	Loxodonta_africana
ENSMUSG00000057388	Mrpl18	100	83.333	ENSMFAG00000043173	MRPL18	100	83.333	Macaca_fascicularis
ENSMUSG00000057388	Mrpl18	100	81.111	ENSMFAG00000017689	-	100	81.111	Macaca_fascicularis
ENSMUSG00000057388	Mrpl18	99	81.564	ENSMMUG00000015343	-	99	81.564	Macaca_mulatta
ENSMUSG00000057388	Mrpl18	100	82.778	ENSMNEG00000045344	-	100	82.778	Macaca_nemestrina
ENSMUSG00000057388	Mrpl18	85	83.007	ENSMNEG00000044843	-	97	83.007	Macaca_nemestrina
ENSMUSG00000057388	Mrpl18	100	82.222	ENSMLEG00000009952	MRPL18	100	82.222	Mandrillus_leucophaeus
ENSMUSG00000057388	Mrpl18	84	50.980	ENSMAMG00000006824	mrpl18	81	51.634	Mastacembelus_armatus
ENSMUSG00000057388	Mrpl18	84	52.288	ENSMZEG00005013407	mrpl18	81	52.288	Maylandia_zebra
ENSMUSG00000057388	Mrpl18	87	88.535	ENSMAUG00000007294	Mrpl18	100	88.535	Mesocricetus_auratus
ENSMUSG00000057388	Mrpl18	100	82.222	ENSMICG00000044845	MRPL18	100	82.222	Microcebus_murinus
ENSMUSG00000057388	Mrpl18	100	90.556	ENSMOCG00000016680	Mrpl18	100	90.556	Microtus_ochrogaster
ENSMUSG00000057388	Mrpl18	84	50.980	ENSMMOG00000003126	mrpl18	81	50.980	Mola_mola
ENSMUSG00000057388	Mrpl18	87	71.338	ENSMODG00000007428	MRPL18	92	71.338	Monodelphis_domestica
ENSMUSG00000057388	Mrpl18	82	52.027	ENSMALG00000011096	mrpl18	80	52.027	Monopterus_albus
ENSMUSG00000057388	Mrpl18	100	98.889	MGP_CAROLIEiJ_G0021044	Mrpl18	100	98.889	Mus_caroli
ENSMUSG00000057388	Mrpl18	100	92.265	MGP_PahariEiJ_G0023360	Mrpl18	100	92.265	Mus_pahari
ENSMUSG00000057388	Mrpl18	100	99.444	MGP_SPRETEiJ_G0021976	Mrpl18	100	99.444	Mus_spretus
ENSMUSG00000057388	Mrpl18	100	82.222	ENSMPUG00000005009	MRPL18	100	82.222	Mustela_putorius_furo
ENSMUSG00000057388	Mrpl18	100	76.667	ENSMLUG00000000743	MRPL18	100	76.667	Myotis_lucifugus
ENSMUSG00000057388	Mrpl18	100	85.556	ENSNGAG00000020549	Mrpl18	100	85.556	Nannospalax_galili
ENSMUSG00000057388	Mrpl18	84	51.634	ENSNBRG00000009833	mrpl18	81	51.634	Neolamprologus_brichardi
ENSMUSG00000057388	Mrpl18	100	83.333	ENSNLEG00000011269	MRPL18	100	83.333	Nomascus_leucogenys
ENSMUSG00000057388	Mrpl18	100	72.778	ENSMEUG00000011861	MRPL18	100	72.778	Notamacropus_eugenii
ENSMUSG00000057388	Mrpl18	100	81.111	ENSOPRG00000003798	MRPL18	100	81.111	Ochotona_princeps
ENSMUSG00000057388	Mrpl18	98	79.096	ENSODEG00000006974	-	96	79.096	Octodon_degus
ENSMUSG00000057388	Mrpl18	95	78.363	ENSODEG00000014142	-	91	78.363	Octodon_degus
ENSMUSG00000057388	Mrpl18	100	80.556	ENSODEG00000007318	-	100	80.556	Octodon_degus
ENSMUSG00000057388	Mrpl18	84	52.941	ENSONIG00000004894	mrpl18	82	52.941	Oreochromis_niloticus
ENSMUSG00000057388	Mrpl18	100	80.000	ENSOCUG00000013858	MRPL18	100	80.000	Oryctolagus_cuniculus
ENSMUSG00000057388	Mrpl18	84	51.634	ENSORLG00000004513	mrpl18	79	52.667	Oryzias_latipes
ENSMUSG00000057388	Mrpl18	84	51.634	ENSORLG00020013680	mrpl18	79	52.667	Oryzias_latipes_hni
ENSMUSG00000057388	Mrpl18	84	51.634	ENSORLG00015022098	mrpl18	79	52.667	Oryzias_latipes_hsok
ENSMUSG00000057388	Mrpl18	82	52.349	ENSOMEG00000004283	mrpl18	78	53.020	Oryzias_melastigma
ENSMUSG00000057388	Mrpl18	100	80.556	ENSOGAG00000007327	MRPL18	100	80.556	Otolemur_garnettii
ENSMUSG00000057388	Mrpl18	100	78.333	ENSOARG00000004568	MRPL18	100	78.333	Ovis_aries
ENSMUSG00000057388	Mrpl18	100	83.333	ENSPPAG00000001652	MRPL18	100	83.333	Pan_paniscus
ENSMUSG00000057388	Mrpl18	100	82.222	ENSPPRG00000013063	MRPL18	100	82.222	Panthera_pardus
ENSMUSG00000057388	Mrpl18	100	82.222	ENSPTIG00000010107	MRPL18	100	82.222	Panthera_tigris_altaica
ENSMUSG00000057388	Mrpl18	100	83.333	ENSPTRG00000018761	MRPL18	100	83.333	Pan_troglodytes
ENSMUSG00000057388	Mrpl18	100	82.222	ENSPANG00000023667	-	100	82.222	Papio_anubis
ENSMUSG00000057388	Mrpl18	100	82.778	ENSPANG00000024959	-	100	82.778	Papio_anubis
ENSMUSG00000057388	Mrpl18	84	43.506	ENSPKIG00000019513	mrpl18	77	43.506	Paramormyrops_kingsleyae
ENSMUSG00000057388	Mrpl18	82	51.351	ENSPMGG00000017518	mrpl18	73	51.351	Periophthalmus_magnuspinnatus
ENSMUSG00000057388	Mrpl18	100	88.333	ENSPEMG00000016836	Mrpl18	100	88.333	Peromyscus_maniculatus_bairdii
ENSMUSG00000057388	Mrpl18	81	56.552	ENSPMAG00000004647	mrpl18	82	53.374	Petromyzon_marinus
ENSMUSG00000057388	Mrpl18	96	70.349	ENSPCIG00000003362	MRPL18	96	70.349	Phascolarctos_cinereus
ENSMUSG00000057388	Mrpl18	89	46.707	ENSPFOG00000002196	mrpl18	88	46.707	Poecilia_formosa
ENSMUSG00000057388	Mrpl18	89	46.108	ENSPLAG00000017970	mrpl18	88	46.108	Poecilia_latipinna
ENSMUSG00000057388	Mrpl18	89	46.707	ENSPMEG00000008791	mrpl18	88	46.707	Poecilia_mexicana
ENSMUSG00000057388	Mrpl18	89	47.305	ENSPREG00000002415	mrpl18	88	47.305	Poecilia_reticulata
ENSMUSG00000057388	Mrpl18	100	82.778	ENSPPYG00000017147	MRPL18	100	82.778	Pongo_abelii
ENSMUSG00000057388	Mrpl18	100	82.222	ENSPCOG00000025100	MRPL18	100	82.222	Propithecus_coquereli
ENSMUSG00000057388	Mrpl18	100	78.333	ENSPVAG00000005322	MRPL18	100	78.333	Pteropus_vampyrus
ENSMUSG00000057388	Mrpl18	84	51.634	ENSPNYG00000000887	mrpl18	81	51.634	Pundamilia_nyererei
ENSMUSG00000057388	Mrpl18	91	45.455	ENSPNAG00000019789	mrpl18	93	45.455	Pygocentrus_nattereri
ENSMUSG00000057388	Mrpl18	100	95.556	ENSRNOG00000014582	Mrpl18	100	95.556	Rattus_norvegicus
ENSMUSG00000057388	Mrpl18	90	84.568	ENSRBIG00000039702	-	98	84.568	Rhinopithecus_bieti
ENSMUSG00000057388	Mrpl18	100	73.889	ENSRBIG00000038575	-	100	73.889	Rhinopithecus_bieti
ENSMUSG00000057388	Mrpl18	100	83.333	ENSRROG00000030298	MRPL18	100	83.333	Rhinopithecus_roxellana
ENSMUSG00000057388	Mrpl18	100	83.889	ENSSBOG00000017384	MRPL18	100	83.889	Saimiri_boliviensis_boliviensis
ENSMUSG00000057388	Mrpl18	84	43.506	ENSSFOG00015001208	mrpl18	76	43.506	Scleropages_formosus
ENSMUSG00000057388	Mrpl18	92	47.059	ENSSMAG00000002207	mrpl18	90	47.059	Scophthalmus_maximus
ENSMUSG00000057388	Mrpl18	84	51.634	ENSSDUG00000003242	mrpl18	81	51.634	Seriola_dumerili
ENSMUSG00000057388	Mrpl18	92	49.102	ENSSLDG00000002846	mrpl18	88	49.102	Seriola_lalandi_dorsalis
ENSMUSG00000057388	Mrpl18	84	54.248	ENSSPAG00000008506	mrpl18	81	54.248	Stegastes_partitus
ENSMUSG00000057388	Mrpl18	100	81.667	ENSSSCG00000004047	MRPL18	100	81.667	Sus_scrofa
ENSMUSG00000057388	Mrpl18	83	52.667	ENSTRUG00000024901	mrpl18	81	52.667	Takifugu_rubripes
ENSMUSG00000057388	Mrpl18	84	49.673	ENSTNIG00000014217	mrpl18	75	52.857	Tetraodon_nigroviridis
ENSMUSG00000057388	Mrpl18	100	79.444	ENSTTRG00000010404	MRPL18	100	79.444	Tursiops_truncatus
ENSMUSG00000057388	Mrpl18	100	76.289	ENSUAMG00000015786	MRPL18	100	76.289	Ursus_americanus
ENSMUSG00000057388	Mrpl18	100	76.289	ENSUMAG00000011916	MRPL18	100	76.289	Ursus_maritimus
ENSMUSG00000057388	Mrpl18	78	85.714	ENSVPAG00000008211	MRPL18	100	85.714	Vicugna_pacos
ENSMUSG00000057388	Mrpl18	100	77.835	ENSVVUG00000006607	MRPL18	100	77.835	Vulpes_vulpes
ENSMUSG00000057388	Mrpl18	89	61.250	ENSXETG00000023893	mrpl18	91	61.250	Xenopus_tropicalis
ENSMUSG00000057388	Mrpl18	89	47.305	ENSXCOG00000003125	mrpl18	89	47.305	Xiphophorus_couchianus
ENSMUSG00000057388	Mrpl18	89	46.707	ENSXMAG00000029792	MRPL18	88	46.707	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0008097	5S rRNA binding	21873635.	IBA	Function
GO:0008097	5S rRNA binding	-	ISO	Function
GO:0035928	rRNA import into mitochondrion	-	ISO	Process