EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000057421 (Gene tree)
Gene ID: 76130
Gene Symbol: Las1l
Alias: 1810030A06Rik|5830482G23Rik
Full Name: LAS1-like (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 21628 bases
Position: chrX:95935335-95956962
Accession: 1923380
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000078901	Las1	PF04031.13	1.2e-41	1	1
ENSMUSP00000109495	Las1	PF04031.13	1.2e-41	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000137659	-	862	-	-	- (aa)	-	-
ENSMUST00000152181	-	778	-	-	- (aa)	-	-
ENSMUST00000079987	-	2530	XM_017318635	ENSMUSP00000078901	759 (aa)	XP_017174124	A2BE28
ENSMUST00000126605	-	4126	-	-	- (aa)	-	-
ENSMUST00000147994	-	945	-	-	- (aa)	-	-
ENSMUST00000139717	-	4625	-	-	- (aa)	-	-
ENSMUST00000113864	-	2581	XM_006528334	ENSMUSP00000109495	776 (aa)	XP_006528397	A2BE28

Gene Model

Click here to download ENSMUSG00000057421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000057421's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000057421	Las1l	100	66.195	ENSG00000001497	LAS1L	98	66.452	Homo_sapiens
ENSMUSG00000057421	Las1l	100	65.424	ENSAMEG00000006932	LAS1L	98	65.296	Ailuropoda_melanoleuca
ENSMUSG00000057421	Las1l	79	38.066	ENSATEG00000023050	las1l	97	37.302	Anabas_testudineus
ENSMUSG00000057421	Las1l	85	37.043	ENSAPLG00000003903	LAS1L	75	38.462	Anas_platyrhynchos
ENSMUSG00000057421	Las1l	97	35.395	ENSACAG00000013567	LAS1L	92	42.276	Anolis_carolinensis
ENSMUSG00000057421	Las1l	100	64.781	ENSANAG00000024900	LAS1L	98	63.949	Aotus_nancymaae
ENSMUSG00000057421	Las1l	66	55.921	ENSAMXG00000011342	las1l	92	36.570	Astyanax_mexicanus
ENSMUSG00000057421	Las1l	100	65.576	ENSBTAG00000002210	LAS1L	93	66.246	Bos_taurus
ENSMUSG00000057421	Las1l	100	63.380	ENSCJAG00000001434	LAS1L	88	74.364	Callithrix_jacchus
ENSMUSG00000057421	Las1l	100	67.323	ENSCAFG00000016570	LAS1L	100	67.060	Canis_familiaris
ENSMUSG00000057421	Las1l	100	67.323	ENSCAFG00020017999	LAS1L	100	67.060	Canis_lupus_dingo
ENSMUSG00000057421	Las1l	87	74.906	ENSTSYG00000014655	LAS1L	98	66.097	Carlito_syrichta
ENSMUSG00000057421	Las1l	100	65.876	ENSCPOG00000014261	LAS1L	100	65.395	Cavia_porcellus
ENSMUSG00000057421	Las1l	100	64.126	ENSCCAG00000030149	LAS1L	98	63.995	Cebus_capucinus
ENSMUSG00000057421	Las1l	100	66.581	ENSCATG00000033406	LAS1L	92	72.059	Cercocebus_atys
ENSMUSG00000057421	Las1l	100	68.158	ENSCLAG00000006717	LAS1L	75	74.359	Chinchilla_lanigera
ENSMUSG00000057421	Las1l	78	52.459	ENSCPBG00000006993	LAS1L	89	52.459	Chrysemys_picta_bellii
ENSMUSG00000057421	Las1l	100	66.581	ENSCANG00000033334	LAS1L	98	66.452	Colobus_angolensis_palliatus
ENSMUSG00000057421	Las1l	100	78.745	ENSCGRG00001023388	Las1l	73	86.703	Cricetulus_griseus_chok1gshd
ENSMUSG00000057421	Las1l	100	78.873	ENSCGRG00000007678	Las1l	73	86.885	Cricetulus_griseus_crigri
ENSMUSG00000057421	Las1l	82	38.343	ENSCSEG00000003223	las1l	99	38.104	Cynoglossus_semilaevis
ENSMUSG00000057421	Las1l	79	39.506	ENSDARG00000062457	las1l	93	39.175	Danio_rerio
ENSMUSG00000057421	Las1l	100	58.981	ENSDNOG00000038219	LAS1L	73	63.262	Dasypus_novemcinctus
ENSMUSG00000057421	Las1l	71	65.709	ENSDORG00000001130	Las1l	70	65.523	Dipodomys_ordii
ENSMUSG00000057421	Las1l	83	68.820	ENSETEG00000012097	LAS1L	63	66.854	Echinops_telfairi
ENSMUSG00000057421	Las1l	100	64.136	ENSEASG00005006987	LAS1L	98	63.351	Equus_asinus_asinus
ENSMUSG00000057421	Las1l	68	76.699	ENSECAG00000021891	LAS1L	74	76.030	Equus_caballus
ENSMUSG00000057421	Las1l	66	81.633	ENSEEUG00000011393	LAS1L	75	81.633	Erinaceus_europaeus
ENSMUSG00000057421	Las1l	78	38.835	ENSELUG00000010702	las1l	92	38.835	Esox_lucius
ENSMUSG00000057421	Las1l	96	71.661	ENSFCAG00000007060	LAS1L	100	67.148	Felis_catus
ENSMUSG00000057421	Las1l	97	36.559	ENSFALG00000004287	LAS1L	96	46.341	Ficedula_albicollis
ENSMUSG00000057421	Las1l	100	64.868	ENSFDAG00000006785	LAS1L	73	74.669	Fukomys_damarensis
ENSMUSG00000057421	Las1l	76	38.344	ENSFHEG00000011634	las1l	97	36.810	Fundulus_heteroclitus
ENSMUSG00000057421	Las1l	82	48.598	ENSGALG00000043447	LAS1L	90	45.872	Gallus_gallus
ENSMUSG00000057421	Las1l	55	52.459	ENSGAGG00000005577	LAS1L	91	52.459	Gopherus_agassizii
ENSMUSG00000057421	Las1l	100	66.452	ENSGGOG00000008739	LAS1L	98	66.452	Gorilla_gorilla
ENSMUSG00000057421	Las1l	100	67.589	ENSHGLG00000002770	LAS1L	100	68.026	Heterocephalus_glaber_female
ENSMUSG00000057421	Las1l	89	65.751	ENSHGLG00100009166	LAS1L	100	66.234	Heterocephalus_glaber_male
ENSMUSG00000057421	Las1l	75	56.954	ENSIPUG00000016712	LAS1L	95	38.755	Ictalurus_punctatus
ENSMUSG00000057421	Las1l	71	75.461	ENSSTOG00000028104	LAS1L	72	75.797	Ictidomys_tridecemlineatus
ENSMUSG00000057421	Las1l	77	40.787	ENSLOCG00000014635	las1l	90	40.779	Lepisosteus_oculatus
ENSMUSG00000057421	Las1l	94	62.309	ENSLAFG00000000915	LAS1L	85	73.120	Loxodonta_africana
ENSMUSG00000057421	Las1l	100	66.581	ENSMFAG00000039204	LAS1L	98	66.195	Macaca_fascicularis
ENSMUSG00000057421	Las1l	100	66.581	ENSMMUG00000003922	LAS1L	98	66.195	Macaca_mulatta
ENSMUSG00000057421	Las1l	100	66.581	ENSMNEG00000039412	LAS1L	98	66.195	Macaca_nemestrina
ENSMUSG00000057421	Las1l	83	40.854	ENSMGAG00000000760	LAS1L	95	46.789	Meleagris_gallopavo
ENSMUSG00000057421	Las1l	68	84.489	ENSMAUG00000012113	Las1l	71	84.644	Mesocricetus_auratus
ENSMUSG00000057421	Las1l	100	67.568	ENSMICG00000010703	LAS1L	91	69.466	Microcebus_murinus
ENSMUSG00000057421	Las1l	100	76.142	ENSMOCG00000019612	Las1l	72	84.000	Microtus_ochrogaster
ENSMUSG00000057421	Las1l	86	46.488	ENSMODG00000010447	-	93	45.979	Monodelphis_domestica
ENSMUSG00000057421	Las1l	82	44.950	ENSMODG00000005195	-	100	43.378	Monodelphis_domestica
ENSMUSG00000057421	Las1l	78	37.822	ENSMALG00000002416	las1l	92	38.115	Monopterus_albus
ENSMUSG00000057421	Las1l	63	53.465	ENSMALG00000002380	-	90	53.465	Monopterus_albus
ENSMUSG00000057421	Las1l	100	97.036	MGP_CAROLIEiJ_G0033249	Las1l	100	97.036	Mus_caroli
ENSMUSG00000057421	Las1l	100	92.526	MGP_PahariEiJ_G0031788	Las1l	100	92.526	Mus_pahari
ENSMUSG00000057421	Las1l	100	98.458	MGP_SPRETEiJ_G0034414	Las1l	100	98.458	Mus_spretus
ENSMUSG00000057421	Las1l	96	66.713	ENSMPUG00000001165	LAS1L	92	66.852	Mustela_putorius_furo
ENSMUSG00000057421	Las1l	100	60.841	ENSMLUG00000013640	LAS1L	87	75.453	Myotis_lucifugus
ENSMUSG00000057421	Las1l	100	65.572	ENSNGAG00000015256	Las1l	74	75.047	Nannospalax_galili
ENSMUSG00000057421	Las1l	100	66.324	ENSNLEG00000000386	LAS1L	98	66.710	Nomascus_leucogenys
ENSMUSG00000057421	Las1l	55	62.637	ENSMEUG00000012762	-	73	62.637	Notamacropus_eugenii
ENSMUSG00000057421	Las1l	78	39.423	ENSONIG00000021109	-	94	37.500	Oreochromis_niloticus
ENSMUSG00000057421	Las1l	88	71.670	ENSOCUG00000006760	LAS1L	96	71.243	Oryctolagus_cuniculus
ENSMUSG00000057421	Las1l	64	37.972	ENSORLG00000002014	las1l	64	38.889	Oryzias_latipes
ENSMUSG00000057421	Las1l	64	38.171	ENSORLG00020020991	las1l	64	39.095	Oryzias_latipes_hni
ENSMUSG00000057421	Las1l	78	42.056	ENSORLG00015015381	las1l	94	39.450	Oryzias_latipes_hsok
ENSMUSG00000057421	Las1l	78	42.056	ENSOMEG00000011147	las1l	96	38.017	Oryzias_melastigma
ENSMUSG00000057421	Las1l	100	66.452	ENSPPAG00000034161	LAS1L	98	66.195	Pan_paniscus
ENSMUSG00000057421	Las1l	95	71.743	ENSPPRG00000005158	LAS1L	99	66.321	Panthera_pardus
ENSMUSG00000057421	Las1l	89	75.627	ENSPTIG00000005666	LAS1L	95	76.173	Panthera_tigris_altaica
ENSMUSG00000057421	Las1l	100	66.452	ENSPTRG00000021970	LAS1L	98	66.452	Pan_troglodytes
ENSMUSG00000057421	Las1l	100	66.452	ENSPANG00000005318	LAS1L	98	66.452	Papio_anubis
ENSMUSG00000057421	Las1l	78	40.289	ENSPKIG00000012906	las1l	90	39.669	Paramormyrops_kingsleyae
ENSMUSG00000057421	Las1l	90	44.177	ENSPSIG00000016596	LAS1L	90	44.399	Pelodiscus_sinensis
ENSMUSG00000057421	Las1l	100	80.179	ENSPEMG00000001210	Las1l	73	86.182	Peromyscus_maniculatus_bairdii
ENSMUSG00000057421	Las1l	80	46.774	ENSPCIG00000020273	-	83	47.071	Phascolarctos_cinereus
ENSMUSG00000057421	Las1l	82	38.189	ENSPFOG00000020852	las1l	99	38.086	Poecilia_formosa
ENSMUSG00000057421	Las1l	82	38.189	ENSPLAG00000012514	las1l	99	38.086	Poecilia_latipinna
ENSMUSG00000057421	Las1l	100	66.581	ENSPPYG00000020417	LAS1L	95	66.838	Pongo_abelii
ENSMUSG00000057421	Las1l	74	71.296	ENSPCAG00000016467	LAS1L	78	68.519	Procavia_capensis
ENSMUSG00000057421	Las1l	100	66.967	ENSPCOG00000023037	LAS1L	100	67.017	Propithecus_coquereli
ENSMUSG00000057421	Las1l	74	36.607	ENSPNAG00000013164	las1l	89	36.080	Pygocentrus_nattereri
ENSMUSG00000057421	Las1l	100	79.297	ENSRNOG00000021748	Las1l	100	85.938	Rattus_norvegicus
ENSMUSG00000057421	Las1l	100	66.229	ENSRBIG00000027629	LAS1L	98	66.324	Rhinopithecus_bieti
ENSMUSG00000057421	Las1l	71	73.153	ENSRROG00000030739	LAS1L	75	73.333	Rhinopithecus_roxellana
ENSMUSG00000057421	Las1l	100	64.653	ENSSBOG00000029097	LAS1L	98	63.949	Saimiri_boliviensis_boliviensis
ENSMUSG00000057421	Las1l	90	42.527	ENSSHAG00000017507	-	91	45.214	Sarcophilus_harrisii
ENSMUSG00000057421	Las1l	91	42.609	ENSSHAG00000005698	-	90	45.740	Sarcophilus_harrisii
ENSMUSG00000057421	Las1l	51	40.952	ENSSFOG00015008737	las1l	96	37.615	Scleropages_formosus
ENSMUSG00000057421	Las1l	54	90.323	ENSSARG00000013410	-	61	90.323	Sorex_araneus
ENSMUSG00000057421	Las1l	73	46.154	ENSSPUG00000014164	LAS1L	91	44.348	Sphenodon_punctatus
ENSMUSG00000057421	Las1l	78	41.121	ENSSPAG00000000289	las1l	93	40.367	Stegastes_partitus
ENSMUSG00000057421	Las1l	100	69.382	ENSSSCG00000012366	LAS1L	74	76.404	Sus_scrofa
ENSMUSG00000057421	Las1l	100	56.757	ENSTBEG00000011731	LAS1L	98	56.113	Tupaia_belangeri
ENSMUSG00000057421	Las1l	98	62.286	ENSTTRG00000007470	LAS1L	95	63.073	Tursiops_truncatus
ENSMUSG00000057421	Las1l	50	74.036	ENSUMAG00000017063	-	96	75.064	Ursus_maritimus
ENSMUSG00000057421	Las1l	100	67.411	ENSVVUG00000022702	LAS1L	78	75.588	Vulpes_vulpes
ENSMUSG00000057421	Las1l	92	37.906	ENSXETG00000030019	las1l	90	39.511	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000460	maturation of 5.8S rRNA	21873635.	IBA	Process
GO:0000470	maturation of LSU-rRNA	21873635.	IBA	Process
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0030687	preribosome, large subunit precursor	21873635.	IBA	Component
GO:0071339	MLL1 complex	-	ISO	Component