EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000057649 (Gene tree)
Gene ID: 105246
Gene Symbol: Brd9
Alias: -
Full Name: bromodomain containing 9
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 23085
Position: chr13: 73937811-73960895
Accession: 2145317
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000222399	-	2430	XM_006517026	ENSMUSP00000152390	596 (aa)	XP_006517089	Q3UQU0
ENSMUST00000223063	-	826	-	-	- (aa)	-	-
ENSMUST00000220968	-	756	-	-	- (aa)	-	-
ENSMUST00000223446	-	2342	-	-	- (aa)	-	-
ENSMUST00000223455	-	2799	-	-	- (aa)	-	-
ENSMUST00000223525	-	1111	XM_017315339	ENSMUSP00000152308	370 (aa)	XP_017170828	A0A1Y7VJ63
ENSMUST00000221324	-	1103	-	-	- (aa)	-	-
ENSMUST00000222749	-	635	-	ENSMUSP00000152257	210 (aa)	-	A0A1Y7VN62
ENSMUST00000223238	-	845	-	ENSMUSP00000152627	52 (aa)	-	A0A1Y7VNT5
ENSMUST00000099384	-	2407	XM_006517024	ENSMUSP00000096982	597 (aa)	XP_006517087	A0A0R4J175
ENSMUST00000220488	-	3893	-	-	- (aa)	-	-
ENSMUST00000222191	-	4569	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000057649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000057649's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000057649	Brd9	85	51.934	ENSMUSG00000031660	Brd7	89	35.452	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0006325	chromatin organization	-	IEA	Process
GO:0008150	biological_process	-	ND	Process
GO:0016514	SWI/SNF complex	29374058.	IDA	Component
GO:0016514	SWI/SNF complex	-	ISO	Component
GO:0070577	lysine-acetylated histone binding	-	ISO	Function