EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000057706 (Gene tree)
Gene ID: 108797
Gene Symbol: Mex3b
Alias: 4931439A04Rik|Rkhd3
Full Name: mex3 RNA binding family member B
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 4183 bases
Position: chr7:82867333-82871515
Accession: 1918252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000082168	KH_1	PF00013.29	1.4e-25	1	2
ENSMUSP00000082168	KH_1	PF00013.29	1.4e-25	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000082237	-	3355	-	ENSMUSP00000082168	576 (aa)	-	F8WJD6

Gene Model

Click here to download ENSMUSG00000057706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000057706's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000057706	Mex3b	89	59.020	ENSMUSG00000037253	Mex3c	67	57.843

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000057706	Mex3b	100	96.360	ENSG00000183496	MEX3B	100	96.360	Homo_sapiens
ENSMUSG00000057706	Mex3b	100	67.114	ENSAPOG00000006457	mex3b	100	67.002	Acanthochromis_polyacanthus
ENSMUSG00000057706	Mex3b	95	89.397	ENSAMEG00000006037	MEX3B	100	89.397	Ailuropoda_melanoleuca
ENSMUSG00000057706	Mex3b	100	63.993	ENSACIG00000017783	mex3b	100	62.628	Amphilophus_citrinellus
ENSMUSG00000057706	Mex3b	58	83.251	ENSACIG00000005655	-	64	84.772	Amphilophus_citrinellus
ENSMUSG00000057706	Mex3b	100	67.114	ENSAOCG00000023903	mex3b	100	66.834	Amphiprion_ocellaris
ENSMUSG00000057706	Mex3b	100	67.114	ENSAPEG00000000263	mex3b	100	66.834	Amphiprion_percula
ENSMUSG00000057706	Mex3b	89	49.462	ENSATEG00000015187	-	71	80.741	Anabas_testudineus
ENSMUSG00000057706	Mex3b	100	66.949	ENSATEG00000012352	mex3b	100	66.047	Anabas_testudineus
ENSMUSG00000057706	Mex3b	85	63.230	ENSACAG00000011072	MEX3B	100	63.424	Anolis_carolinensis
ENSMUSG00000057706	Mex3b	100	97.049	ENSANAG00000027164	MEX3B	100	97.049	Aotus_nancymaae
ENSMUSG00000057706	Mex3b	100	67.002	ENSACLG00000025776	mex3b	100	67.003	Astatotilapia_calliptera
ENSMUSG00000057706	Mex3b	100	68.792	ENSAMXG00000033615	mex3b	100	67.905	Astyanax_mexicanus
ENSMUSG00000057706	Mex3b	100	92.699	ENSBTAG00000052904	MEX3B	100	93.379	Bos_taurus
ENSMUSG00000057706	Mex3b	100	95.060	ENSCJAG00000008043	MEX3B	100	95.060	Callithrix_jacchus
ENSMUSG00000057706	Mex3b	100	95.189	ENSCAFG00000013759	MEX3B	100	95.189	Canis_familiaris
ENSMUSG00000057706	Mex3b	100	95.869	ENSCAFG00020015832	MEX3B	100	95.869	Canis_lupus_dingo
ENSMUSG00000057706	Mex3b	100	92.150	ENSCHIG00000019863	MEX3B	100	92.662	Capra_hircus
ENSMUSG00000057706	Mex3b	85	97.723	ENSTSYG00000025636	MEX3B	92	97.723	Carlito_syrichta
ENSMUSG00000057706	Mex3b	66	95.023	ENSCAPG00000017918	MEX3B	84	95.023	Cavia_aperea
ENSMUSG00000057706	Mex3b	100	77.104	ENSCPOG00000008241	MEX3B	97	92.118	Cavia_porcellus
ENSMUSG00000057706	Mex3b	100	93.990	ENSCCAG00000001259	MEX3B	100	93.990	Cebus_capucinus
ENSMUSG00000057706	Mex3b	100	96.875	ENSCATG00000030784	MEX3B	100	96.875	Cercocebus_atys
ENSMUSG00000057706	Mex3b	94	96.507	ENSCLAG00000009451	MEX3B	100	96.507	Chinchilla_lanigera
ENSMUSG00000057706	Mex3b	100	97.049	ENSCSAG00000015153	MEX3B	100	97.049	Chlorocebus_sabaeus
ENSMUSG00000057706	Mex3b	100	75.885	ENSCPBG00000007809	MEX3B	100	75.548	Chrysemys_picta_bellii
ENSMUSG00000057706	Mex3b	96	96.931	ENSCANG00000034524	MEX3B	98	96.539	Colobus_angolensis_palliatus
ENSMUSG00000057706	Mex3b	100	99.306	ENSCGRG00001016198	Mex3b	100	99.306	Cricetulus_griseus_chok1gshd
ENSMUSG00000057706	Mex3b	85	99.172	ENSCGRG00000018461	Mex3b	100	99.172	Cricetulus_griseus_crigri
ENSMUSG00000057706	Mex3b	100	62.290	ENSCSEG00000005852	mex3b	95	60.935	Cynoglossus_semilaevis
ENSMUSG00000057706	Mex3b	100	70.101	ENSDARG00000058369	mex3b	100	68.591	Danio_rerio
ENSMUSG00000057706	Mex3b	100	94.281	ENSDNOG00000043628	MEX3B	100	94.107	Dasypus_novemcinctus
ENSMUSG00000057706	Mex3b	100	52.194	ENSEBUG00000013015	mex3b	100	52.280	Eptatretus_burgeri
ENSMUSG00000057706	Mex3b	100	52.971	ENSEBUG00000007080	mex3b	100	48.922	Eptatretus_burgeri
ENSMUSG00000057706	Mex3b	100	95.172	ENSEASG00005007105	MEX3B	100	95.000	Equus_asinus_asinus
ENSMUSG00000057706	Mex3b	100	93.144	ENSECAG00000013497	MEX3B	100	93.144	Equus_caballus
ENSMUSG00000057706	Mex3b	100	66.446	ENSELUG00000002503	mex3b	100	66.944	Esox_lucius
ENSMUSG00000057706	Mex3b	100	96.021	ENSFCAG00000037513	MEX3B	100	96.021	Felis_catus
ENSMUSG00000057706	Mex3b	76	86.207	ENSFALG00000011102	MEX3B	72	86.777	Ficedula_albicollis
ENSMUSG00000057706	Mex3b	70	97.735	ENSFDAG00000018452	MEX3B	100	97.735	Fukomys_damarensis
ENSMUSG00000057706	Mex3b	70	68.327	ENSFHEG00000022740	-	84	67.143	Fundulus_heteroclitus
ENSMUSG00000057706	Mex3b	50	82.558	ENSGMOG00000016534	mex3b	52	82.171	Gadus_morhua
ENSMUSG00000057706	Mex3b	89	74.383	ENSGALG00000032984	MEX3B	92	77.290	Gallus_gallus
ENSMUSG00000057706	Mex3b	100	56.649	ENSGACG00000012530	mex3b	97	57.778	Gasterosteus_aculeatus
ENSMUSG00000057706	Mex3b	100	76.361	ENSGAGG00000022839	MEX3B	100	77.211	Gopherus_agassizii
ENSMUSG00000057706	Mex3b	99	96.154	ENSGGOG00000000597	MEX3B	100	96.154	Gorilla_gorilla
ENSMUSG00000057706	Mex3b	100	67.169	ENSHBUG00000022683	mex3b	100	67.172	Haplochromis_burtoni
ENSMUSG00000057706	Mex3b	100	95.833	ENSHGLG00000012504	MEX3B	100	95.833	Heterocephalus_glaber_female
ENSMUSG00000057706	Mex3b	95	96.337	ENSHGLG00100008208	MEX3B	100	96.337	Heterocephalus_glaber_male
ENSMUSG00000057706	Mex3b	100	60.000	ENSHCOG00000007290	mex3b	100	60.342	Hippocampus_comes
ENSMUSG00000057706	Mex3b	69	56.397	ENSHCOG00000010812	-	64	69.343	Hippocampus_comes
ENSMUSG00000057706	Mex3b	100	66.892	ENSIPUG00000023356	mex3b	100	66.553	Ictalurus_punctatus
ENSMUSG00000057706	Mex3b	95	97.993	ENSSTOG00000006738	MEX3B	90	97.978	Ictidomys_tridecemlineatus
ENSMUSG00000057706	Mex3b	100	97.237	ENSJJAG00000015411	Mex3b	100	97.237	Jaculus_jaculus
ENSMUSG00000057706	Mex3b	89	64.176	ENSLBEG00000015131	mex3b	95	63.793	Labrus_bergylta
ENSMUSG00000057706	Mex3b	100	73.299	ENSLACG00000015887	MEX3B	100	73.129	Latimeria_chalumnae
ENSMUSG00000057706	Mex3b	100	71.405	ENSLOCG00000012858	mex3b	100	70.017	Lepisosteus_oculatus
ENSMUSG00000057706	Mex3b	100	92.512	ENSLAFG00000006027	MEX3B	95	100.000	Loxodonta_africana
ENSMUSG00000057706	Mex3b	100	96.875	ENSMFAG00000037608	MEX3B	100	96.875	Macaca_fascicularis
ENSMUSG00000057706	Mex3b	100	95.230	ENSMMUG00000018639	MEX3B	100	95.230	Macaca_mulatta
ENSMUSG00000057706	Mex3b	100	97.222	ENSMNEG00000043420	MEX3B	100	97.222	Macaca_nemestrina
ENSMUSG00000057706	Mex3b	95	97.818	ENSMLEG00000037832	MEX3B	100	97.818	Mandrillus_leucophaeus
ENSMUSG00000057706	Mex3b	100	68.289	ENSMAMG00000011325	mex3b	100	67.059	Mastacembelus_armatus
ENSMUSG00000057706	Mex3b	100	67.169	ENSMZEG00005003082	mex3b	100	66.667	Maylandia_zebra
ENSMUSG00000057706	Mex3b	100	98.785	ENSMAUG00000001211	Mex3b	100	98.785	Mesocricetus_auratus
ENSMUSG00000057706	Mex3b	100	96.014	ENSMICG00000043733	MEX3B	100	96.014	Microcebus_murinus
ENSMUSG00000057706	Mex3b	100	98.438	ENSMOCG00000019726	Mex3b	100	98.438	Microtus_ochrogaster
ENSMUSG00000057706	Mex3b	70	69.565	ENSMMOG00000000120	-	69	83.495	Mola_mola
ENSMUSG00000057706	Mex3b	100	62.331	ENSMMOG00000015373	mex3b	98	61.111	Mola_mola
ENSMUSG00000057706	Mex3b	100	88.814	ENSMODG00000019387	MEX3B	100	88.475	Monodelphis_domestica
ENSMUSG00000057706	Mex3b	100	65.604	ENSMALG00000010929	mex3b	77	65.494	Monopterus_albus
ENSMUSG00000057706	Mex3b	100	99.653	MGP_CAROLIEiJ_G0029937	Mex3b	100	99.653	Mus_caroli
ENSMUSG00000057706	Mex3b	100	100.000	MGP_PahariEiJ_G0013158	Mex3b	100	100.000	Mus_pahari
ENSMUSG00000057706	Mex3b	100	99.826	MGP_SPRETEiJ_G0031039	Mex3b	100	99.826	Mus_spretus
ENSMUSG00000057706	Mex3b	100	95.833	ENSMPUG00000015493	MEX3B	100	95.833	Mustela_putorius_furo
ENSMUSG00000057706	Mex3b	100	97.059	ENSNGAG00000010102	Mex3b	100	97.059	Nannospalax_galili
ENSMUSG00000057706	Mex3b	100	67.169	ENSNBRG00000000526	mex3b	98	66.667	Neolamprologus_brichardi
ENSMUSG00000057706	Mex3b	69	71.269	ENSNBRG00000012485	-	65	84.772	Neolamprologus_brichardi
ENSMUSG00000057706	Mex3b	100	94.107	ENSNLEG00000036285	MEX3B	100	94.281	Nomascus_leucogenys
ENSMUSG00000057706	Mex3b	86	87.903	ENSMEUG00000002402	MEX3B	95	88.508	Notamacropus_eugenii
ENSMUSG00000057706	Mex3b	92	83.865	ENSOPRG00000009604	MEX3B	100	84.615	Ochotona_princeps
ENSMUSG00000057706	Mex3b	100	95.312	ENSODEG00000015600	MEX3B	100	94.618	Octodon_degus
ENSMUSG00000057706	Mex3b	88	51.631	ENSONIG00000015037	-	63	84.772	Oreochromis_niloticus
ENSMUSG00000057706	Mex3b	100	67.169	ENSONIG00000003391	mex3b	100	66.498	Oreochromis_niloticus
ENSMUSG00000057706	Mex3b	100	79.146	ENSOCUG00000011603	MEX3B	100	79.146	Oryctolagus_cuniculus
ENSMUSG00000057706	Mex3b	70	65.232	ENSORLG00020020174	-	50	80.476	Oryzias_latipes_hni
ENSMUSG00000057706	Mex3b	100	96.200	ENSOGAG00000029664	MEX3B	100	95.682	Otolemur_garnettii
ENSMUSG00000057706	Mex3b	74	87.879	ENSOARG00000014515	MEX3B	99	90.119	Ovis_aries
ENSMUSG00000057706	Mex3b	99	96.329	ENSPPAG00000020407	MEX3B	99	97.500	Pan_paniscus
ENSMUSG00000057706	Mex3b	100	96.707	ENSPTRG00000007373	MEX3B	100	96.707	Pan_troglodytes
ENSMUSG00000057706	Mex3b	100	96.528	ENSPANG00000015634	MEX3B	100	96.528	Papio_anubis
ENSMUSG00000057706	Mex3b	100	67.599	ENSPKIG00000018385	mex3b	100	67.603	Paramormyrops_kingsleyae
ENSMUSG00000057706	Mex3b	100	64.346	ENSPKIG00000019969	-	100	63.837	Paramormyrops_kingsleyae
ENSMUSG00000057706	Mex3b	100	72.203	ENSPSIG00000007979	MEX3B	100	71.743	Pelodiscus_sinensis
ENSMUSG00000057706	Mex3b	57	84.264	ENSPMGG00000017559	-	64	84.264	Periophthalmus_magnuspinnatus
ENSMUSG00000057706	Mex3b	94	69.162	ENSPMGG00000015808	mex3b	100	65.494	Periophthalmus_magnuspinnatus
ENSMUSG00000057706	Mex3b	94	45.194	ENSPMAG00000000125	mex3b	99	44.689	Petromyzon_marinus
ENSMUSG00000057706	Mex3b	69	69.742	ENSPLAG00000002303	-	81	68.773	Poecilia_latipinna
ENSMUSG00000057706	Mex3b	69	70.111	ENSPMEG00000006448	-	81	69.145	Poecilia_mexicana
ENSMUSG00000057706	Mex3b	73	96.675	ENSPPYG00000006723	-	79	96.675	Pongo_abelii
ENSMUSG00000057706	Mex3b	85	96.273	ENSPCAG00000014150	MEX3B	100	96.273	Procavia_capensis
ENSMUSG00000057706	Mex3b	100	96.701	ENSPCOG00000019807	MEX3B	100	96.701	Propithecus_coquereli
ENSMUSG00000057706	Mex3b	100	96.007	ENSPVAG00000000093	MEX3B	100	96.007	Pteropus_vampyrus
ENSMUSG00000057706	Mex3b	95	69.258	ENSPNYG00000019384	mex3b	95	69.217	Pundamilia_nyererei
ENSMUSG00000057706	Mex3b	100	69.140	ENSPNAG00000002109	mex3b	93	85.348	Pygocentrus_nattereri
ENSMUSG00000057706	Mex3b	100	99.479	ENSRNOG00000025142	Mex3b	100	99.479	Rattus_norvegicus
ENSMUSG00000057706	Mex3b	100	96.007	ENSRBIG00000033099	MEX3B	100	96.007	Rhinopithecus_bieti
ENSMUSG00000057706	Mex3b	100	96.007	ENSRROG00000041868	MEX3B	100	96.007	Rhinopithecus_roxellana
ENSMUSG00000057706	Mex3b	88	97.421	ENSSBOG00000031708	MEX3B	100	97.421	Saimiri_boliviensis_boliviensis
ENSMUSG00000057706	Mex3b	100	64.735	ENSSFOG00015016667	mex3b	100	65.058	Scleropages_formosus
ENSMUSG00000057706	Mex3b	94	66.544	ENSSFOG00015016308	mex3b	84	86.824	Scleropages_formosus
ENSMUSG00000057706	Mex3b	100	66.443	ENSSMAG00000017078	mex3b	100	66.164	Scophthalmus_maximus
ENSMUSG00000057706	Mex3b	90	50.178	ENSSDUG00000022255	-	52	82.381	Seriola_dumerili
ENSMUSG00000057706	Mex3b	100	67.672	ENSSDUG00000013254	mex3b	100	67.395	Seriola_dumerili
ENSMUSG00000057706	Mex3b	100	67.672	ENSSLDG00000014620	mex3b	100	67.395	Seriola_lalandi_dorsalis
ENSMUSG00000057706	Mex3b	85	73.706	ENSSARG00000006007	MEX3B	100	73.706	Sorex_araneus
ENSMUSG00000057706	Mex3b	100	67.785	ENSSPAG00000011854	mex3b	100	67.672	Stegastes_partitus
ENSMUSG00000057706	Mex3b	100	97.405	ENSSSCG00000038491	MEX3B	100	97.405	Sus_scrofa
ENSMUSG00000057706	Mex3b	93	65.209	ENSTRUG00000000367	mex3b	98	63.570	Takifugu_rubripes
ENSMUSG00000057706	Mex3b	100	65.641	ENSTNIG00000003398	mex3b	100	62.373	Tetraodon_nigroviridis
ENSMUSG00000057706	Mex3b	100	93.478	ENSUAMG00000019302	MEX3B	100	93.478	Ursus_americanus
ENSMUSG00000057706	Mex3b	91	94.837	ENSVVUG00000004955	MEX3B	84	95.568	Vulpes_vulpes
ENSMUSG00000057706	Mex3b	100	69.468	ENSXETG00000027601	mex3b	100	69.416	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0022409	positive regulation of cell-cell adhesion	24803656.	IMP	Process
GO:0032794	GTPase activating protein binding	24803656.	IPI	Function
GO:0043547	positive regulation of GTPase activity	24803656.	IGI	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0050766	positive regulation of phagocytosis	24803656.	IMP	Process
GO:0072697	protein localization to cell cortex	24803656.	IMP	Process