EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000057788 (Gene tree)
Gene ID
234374
Gene Symbol
Ddx49
Alias
R27090_2
Full Name
DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Minus strand
Length
9624 bases
Position
chr8:70292866-70302489
Accession
2136689
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000008004ResIIIPF04851.155.4e-0611
ENSMUSP00000008004DEADPF00270.299.5e-4711
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000127094-599--- (aa)--
ENSMUST00000138688-1441--- (aa)--
ENSMUST00000127076-304--- (aa)--
ENSMUST00000144890-2163NR_157058-- (aa)--
ENSMUST00000008004-2137-ENSMUSP00000008004480 (aa)-Q4FZF3
Gene Model
Click here to download ENSMUSG00000057788's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000057788's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000057788Ddx497437.903ENSMUSG00000055065Ddx177238.742
ENSMUSG00000057788Ddx497835.000ENSMUSG00000069045Ddx3y5536.316
ENSMUSG00000057788Ddx497434.048ENSMUSG00000021758Ddx45233.687
ENSMUSG00000057788Ddx497632.609ENSMUSG00000026404Ddx595832.609
ENSMUSG00000057788Ddx497931.926ENSMUSG00000107906Gm55809131.926
ENSMUSG00000057788Ddx497932.461ENSMUSG00000022884Eif4a29531.353
ENSMUSG00000057788Ddx497932.190ENSMUSG00000094973Gm89949132.190
ENSMUSG00000057788Ddx497932.723ENSMUSG00000059796Eif4a19232.808
ENSMUSG00000057788Ddx498032.673ENSMUSG00000021494Ddx416232.921
ENSMUSG00000057788Ddx497832.891ENSMUSG00000019432Ddx39b9936.667
ENSMUSG00000057788Ddx497436.316ENSMUSG00000039224D1Pas15536.316
ENSMUSG00000057788Ddx497932.190ENSMUSG00000025580Eif4a39132.190
ENSMUSG00000057788Ddx497834.359ENSMUSG00000020719Ddx57634.062
ENSMUSG00000057788Ddx497733.333ENSMUSG00000032097Ddx67533.333
ENSMUSG00000057788Ddx497435.789ENSMUSG00000000787Ddx3x5535.789
ENSMUSG00000057788Ddx497833.156ENSMUSG00000005481Ddx398733.156
ENSMUSG00000057788Ddx498131.136ENSMUSG00000026806Ddx316331.136
ENSMUSG00000057788Ddx498330.573ENSMUSG00000029504Ddx517130.573
ENSMUSG00000057788Ddx497131.649ENSMUSG00000045538Ddx286831.649
ENSMUSG00000057788Ddx498134.913ENSMUSG00000070291Ddx436034.913
ENSMUSG00000057788Ddx497736.148ENSMUSG00000001674Ddx185636.148
ENSMUSG00000057788Ddx497630.081ENSMUSG00000020677Ddx526130.081
ENSMUSG00000057788Ddx497033.056ENSMUSG00000029389Ddx555833.056
ENSMUSG00000057788Ddx499145.824ENSMUSG00000030204Ddx479545.824
ENSMUSG00000057788Ddx499433.623ENSMUSG00000017999Ddx275933.696
ENSMUSG00000057788Ddx497240.909ENSMUSG00000037149Ddx16340.909
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000057788Ddx499892.521ENSG00000105671DDX499397.368Homo_sapiens
ENSMUSG00000057788Ddx499180.137ENSAPOG00000010961ddx499578.775Acanthochromis_polyacanthus
ENSMUSG00000057788Ddx499891.277ENSAMEG00000011566DDX499493.407Ailuropoda_melanoleuca
ENSMUSG00000057788Ddx499179.863ENSACIG00000011029ddx499577.899Amphilophus_citrinellus
ENSMUSG00000057788Ddx499180.137ENSAOCG00000006257ddx499678.556Amphiprion_ocellaris
ENSMUSG00000057788Ddx499478.714ENSAPEG00000006367ddx499678.556Amphiprion_percula
ENSMUSG00000057788Ddx499577.802ENSATEG00000016661ddx499577.802Anabas_testudineus
ENSMUSG00000057788Ddx498282.443ENSAPLG00000008420DDX499482.443Anas_platyrhynchos
ENSMUSG00000057788Ddx497230.072ENSAPLG00000005543DDX517330.072Anas_platyrhynchos
ENSMUSG00000057788Ddx499891.932ENSANAG00000031415DDX499593.450Aotus_nancymaae
ENSMUSG00000057788Ddx499180.549ENSACLG00000022538ddx499980.523Astatotilapia_calliptera
ENSMUSG00000057788Ddx499475.055ENSAMXG00000016919ddx499774.565Astyanax_mexicanus
ENSMUSG00000057788Ddx499693.682ENSBTAG00000000811DDX499498.148Bos_taurus
ENSMUSG00000057788Ddx499449.565WBGene00019219H20J04.48149.565Caenorhabditis_elegans
ENSMUSG00000057788Ddx499891.507ENSCJAG00000042114DDX499593.231Callithrix_jacchus
ENSMUSG00000057788Ddx499594.092ENSCAFG00000014512DDX499494.092Canis_familiaris
ENSMUSG00000057788Ddx499594.298ENSCAFG00020012375DDX497194.298Canis_lupus_dingo
ENSMUSG00000057788Ddx499593.435ENSCHIG00000019910DDX499593.435Capra_hircus
ENSMUSG00000057788Ddx499891.702ENSTSYG00000028117DDX499693.435Carlito_syrichta
ENSMUSG00000057788Ddx499787.152ENSCAPG00000012222DDX499689.556Cavia_aperea
ENSMUSG00000057788Ddx499991.423ENSCPOG00000013626DDX499594.105Cavia_porcellus
ENSMUSG00000057788Ddx499890.890ENSCCAG00000036092DDX499592.375Cebus_capucinus
ENSMUSG00000057788Ddx499891.702ENSCATG00000032577DDX499593.435Cercocebus_atys
ENSMUSG00000057788Ddx499891.258ENSCLAG00000012844DDX499692.747Chinchilla_lanigera
ENSMUSG00000057788Ddx499887.872ENSCSAG00000005251DDX499589.278Chlorocebus_sabaeus
ENSMUSG00000057788Ddx499583.077ENSCPBG00000012500DDX499583.077Chrysemys_picta_bellii
ENSMUSG00000057788Ddx499359.823ENSCING00000008831-9959.823Ciona_intestinalis
ENSMUSG00000057788Ddx498861.758ENSCSAVG00000000522-9961.758Ciona_savignyi
ENSMUSG00000057788Ddx499886.170ENSCANG00000030901DDX499487.746Colobus_angolensis_palliatus
ENSMUSG00000057788Ddx499993.528ENSCGRG00001009467Ddx499993.528Cricetulus_griseus_chok1gshd
ENSMUSG00000057788Ddx499993.528ENSCGRG00000011487Ddx499993.528Cricetulus_griseus_crigri
ENSMUSG00000057788Ddx499578.556ENSCSEG00000016139ddx499578.556Cynoglossus_semilaevis
ENSMUSG00000057788Ddx499976.582ENSCVAG00000010466ddx499678.775Cyprinodon_variegatus
ENSMUSG00000057788Ddx499178.261ENSDARG00000012899ddx499776.264Danio_rerio
ENSMUSG00000057788Ddx498393.703ENSDORG00000004301Ddx498793.703Dipodomys_ordii
ENSMUSG00000057788Ddx499249.438FBgn0010220Dbp45A8549.438Drosophila_melanogaster
ENSMUSG00000057788Ddx499890.021ENSEASG00005006560DDX499591.247Equus_asinus_asinus
ENSMUSG00000057788Ddx499890.234ENSECAG00000012194DDX499399.038Equus_caballus
ENSMUSG00000057788Ddx499576.264ENSELUG00000012963ddx499576.264Esox_lucius
ENSMUSG00000057788Ddx499593.407ENSFCAG00000009760DDX499593.013Felis_catus
ENSMUSG00000057788Ddx499990.546ENSFDAG00000011064DDX499692.998Fukomys_damarensis
ENSMUSG00000057788Ddx499576.754ENSGMOG00000007556ddx499876.754Gadus_morhua
ENSMUSG00000057788Ddx499581.978ENSGALG00000003130DDX499982.872Gallus_gallus
ENSMUSG00000057788Ddx499677.489ENSGAFG00000004779ddx499678.118Gambusia_affinis
ENSMUSG00000057788Ddx499574.836ENSGACG00000008047ddx499975.472Gasterosteus_aculeatus
ENSMUSG00000057788Ddx499879.237ENSGAGG00000022213DDX499581.538Gopherus_agassizii
ENSMUSG00000057788Ddx499892.094ENSGGOG00000037966DDX499593.435Gorilla_gorilla
ENSMUSG00000057788Ddx499180.320ENSHBUG00000008991ddx499578.462Haplochromis_burtoni
ENSMUSG00000057788Ddx499891.471ENSHGLG00000006789DDX499793.013Heterocephalus_glaber_female
ENSMUSG00000057788Ddx499888.273ENSHGLG00100006283DDX499789.738Heterocephalus_glaber_male
ENSMUSG00000057788Ddx499676.139ENSHCOG00000008961ddx499676.586Hippocampus_comes
ENSMUSG00000057788Ddx499477.655ENSIPUG00000005386ddx499677.193Ictalurus_punctatus
ENSMUSG00000057788Ddx499593.873ENSSTOG00000006749DDX499593.873Ictidomys_tridecemlineatus
ENSMUSG00000057788Ddx499577.582ENSKMAG00000004909ddx499577.582Kryptolebias_marmoratus
ENSMUSG00000057788Ddx499577.243ENSLBEG00000027804ddx499577.243Labrus_bergylta
ENSMUSG00000057788Ddx499677.706ENSLACG00000008244DDX499578.634Latimeria_chalumnae
ENSMUSG00000057788Ddx499380.089ENSLOCG00000002119ddx499380.089Lepisosteus_oculatus
ENSMUSG00000057788Ddx499890.426ENSLAFG00000002934DDX499691.266Loxodonta_africana
ENSMUSG00000057788Ddx499891.702ENSMFAG00000044697DDX499593.435Macaca_fascicularis
ENSMUSG00000057788Ddx499891.702ENSMMUG00000023293DDX499593.435Macaca_mulatta
ENSMUSG00000057788Ddx499891.702ENSMNEG00000029654DDX499593.435Macaca_nemestrina
ENSMUSG00000057788Ddx499886.596ENSMLEG00000042550DDX499487.965Mandrillus_leucophaeus
ENSMUSG00000057788Ddx499578.337ENSMAMG00000006297ddx499578.337Mastacembelus_armatus
ENSMUSG00000057788Ddx499180.549ENSMZEG00005016366ddx499578.681Maylandia_zebra
ENSMUSG00000057788Ddx499581.579ENSMGAG00000004605DDX499981.864Meleagris_gallopavo
ENSMUSG00000057788Ddx499596.711ENSMAUG00000010235Ddx499696.711Mesocricetus_auratus
ENSMUSG00000057788Ddx497693.082ENSMICG00000003640DDX498793.082Microcebus_murinus
ENSMUSG00000057788Ddx499994.363ENSMOCG00000018690Ddx499796.529Microtus_ochrogaster
ENSMUSG00000057788Ddx499676.840ENSMMOG00000007532ddx499677.462Mola_mola
ENSMUSG00000057788Ddx499587.939ENSMODG00000003745DDX499387.939Monodelphis_domestica
ENSMUSG00000057788Ddx499577.899ENSMALG00000018053ddx499677.899Monopterus_albus
ENSMUSG00000057788Ddx4910099.792MGP_CAROLIEiJ_G0031139Ddx4910099.792Mus_caroli
ENSMUSG00000057788Ddx4910098.333MGP_PahariEiJ_G0021604Ddx4910098.333Mus_pahari
ENSMUSG00000057788Ddx4910099.583MGP_SPRETEiJ_G0032257Ddx4910099.583Mus_spretus
ENSMUSG00000057788Ddx499593.626ENSMPUG00000015485DDX499493.640Mustela_putorius_furo
ENSMUSG00000057788Ddx499891.295ENSMLUG00000012159DDX499592.593Myotis_lucifugus
ENSMUSG00000057788Ddx4910092.917ENSNGAG00000019673Ddx499892.917Nannospalax_galili
ENSMUSG00000057788Ddx499181.007ENSNBRG00000022025ddx499579.121Neolamprologus_brichardi
ENSMUSG00000057788Ddx499892.128ENSNLEG00000006136DDX499593.654Nomascus_leucogenys
ENSMUSG00000057788Ddx499388.288ENSMEUG00000011888DDX4910088.288Notamacropus_eugenii
ENSMUSG00000057788Ddx499888.298ENSOPRG00000003824DDX499890.217Ochotona_princeps
ENSMUSG00000057788Ddx499891.898ENSODEG00000011203DDX499493.450Octodon_degus
ENSMUSG00000057788Ddx499180.320ENSONIG00000012731ddx499578.462Oreochromis_niloticus
ENSMUSG00000057788Ddx499876.596ENSORLG00000008509ddx499877.996Oryzias_latipes
ENSMUSG00000057788Ddx499080.370ENSORLG00020014661ddx499778.194Oryzias_latipes_hni
ENSMUSG00000057788Ddx499577.974ENSORLG00015010071ddx499777.974Oryzias_latipes_hsok
ENSMUSG00000057788Ddx499079.446ENSOMEG00000003733ddx499777.313Oryzias_melastigma
ENSMUSG00000057788Ddx499891.684ENSOGAG00000008259DDX499592.998Otolemur_garnettii
ENSMUSG00000057788Ddx499592.810ENSOARG00000010119-9492.810Ovis_aries
ENSMUSG00000057788Ddx499892.521ENSPPAG00000035217DDX499593.873Pan_paniscus
ENSMUSG00000057788Ddx499593.407ENSPPRG00000013274DDX499593.013Panthera_pardus
ENSMUSG00000057788Ddx499593.187ENSPTIG00000011259DDX499592.795Panthera_tigris_altaica
ENSMUSG00000057788Ddx499892.521ENSPTRG00000010725DDX499593.873Pan_troglodytes
ENSMUSG00000057788Ddx499891.702ENSPANG00000003161DDX499593.217Papio_anubis
ENSMUSG00000057788Ddx499875.053ENSPKIG00000006013ddx499476.484Paramormyrops_kingsleyae
ENSMUSG00000057788Ddx498880.896ENSPSIG00000008625DDX499581.775Pelodiscus_sinensis
ENSMUSG00000057788Ddx499075.581ENSPMGG00000017693ddx499377.404Periophthalmus_magnuspinnatus
ENSMUSG00000057788Ddx499695.238ENSPEMG00000009238Ddx499895.643Peromyscus_maniculatus_bairdii
ENSMUSG00000057788Ddx498976.852ENSPMAG00000001195ddx499973.810Petromyzon_marinus
ENSMUSG00000057788Ddx499586.404ENSPCIG00000001050DDX498886.404Phascolarctos_cinereus
ENSMUSG00000057788Ddx499578.462ENSPFOG00000000870ddx499678.462Poecilia_formosa
ENSMUSG00000057788Ddx499578.242ENSPLAG00000016185ddx499678.242Poecilia_latipinna
ENSMUSG00000057788Ddx499578.556ENSPMEG00000016243ddx499678.556Poecilia_mexicana
ENSMUSG00000057788Ddx499578.118ENSPREG00000011214ddx499678.118Poecilia_reticulata
ENSMUSG00000057788Ddx499892.128ENSPPYG00000009755DDX499593.654Pongo_abelii
ENSMUSG00000057788Ddx499889.787ENSPCAG00000002310DDX499591.228Procavia_capensis
ENSMUSG00000057788Ddx499989.958ENSPCOG00000024973DDX499692.140Propithecus_coquereli
ENSMUSG00000057788Ddx499888.323ENSPVAG00000015468DDX499589.497Pteropus_vampyrus
ENSMUSG00000057788Ddx499579.341ENSPNYG00000016672ddx499679.341Pundamilia_nyererei
ENSMUSG00000057788Ddx499078.837ENSPNAG00000003429ddx499675.658Pygocentrus_nattereri
ENSMUSG00000057788Ddx4910096.042ENSRNOG00000022368Ddx4910096.042Rattus_norvegicus
ENSMUSG00000057788Ddx499891.702ENSRBIG00000030758DDX499593.217Rhinopithecus_bieti
ENSMUSG00000057788Ddx499891.489ENSRROG00000032460DDX499592.998Rhinopithecus_roxellana
ENSMUSG00000057788Ddx498647.430YHR169W-9847.430Saccharomyces_cerevisiae
ENSMUSG00000057788Ddx499891.915ENSSBOG00000035812DDX499593.435Saimiri_boliviensis_boliviensis
ENSMUSG00000057788Ddx499586.184ENSSHAG00000010982DDX499086.184Sarcophilus_harrisii
ENSMUSG00000057788Ddx499577.582ENSSFOG00015021150ddx499677.582Scleropages_formosus
ENSMUSG00000057788Ddx499578.775ENSSMAG00000021016ddx499578.775Scophthalmus_maximus
ENSMUSG00000057788Ddx499578.242ENSSDUG00000009696ddx499378.242Seriola_dumerili
ENSMUSG00000057788Ddx499578.022ENSSLDG00000006958ddx499578.022Seriola_lalandi_dorsalis
ENSMUSG00000057788Ddx495992.606ENSSARG00000003669DDX4910092.606Sorex_araneus
ENSMUSG00000057788Ddx499583.736ENSSPUG00000010688DDX499583.736Sphenodon_punctatus
ENSMUSG00000057788Ddx499578.118ENSSPAG00000011486ddx499578.118Stegastes_partitus
ENSMUSG00000057788Ddx499892.144ENSSSCG00000025329DDX499694.092Sus_scrofa
ENSMUSG00000057788Ddx499180.778ENSTRUG00000021524ddx499578.901Takifugu_rubripes
ENSMUSG00000057788Ddx499578.118ENSTNIG00000010188ddx499578.118Tetraodon_nigroviridis
ENSMUSG00000057788Ddx495698.795ENSTBEG00000005967-5698.795Tupaia_belangeri
ENSMUSG00000057788Ddx499983.851ENSTTRG00000003818DDX499586.681Tursiops_truncatus
ENSMUSG00000057788Ddx499593.846ENSUAMG00000007088DDX499691.649Ursus_americanus
ENSMUSG00000057788Ddx498893.824ENSUMAG00000006489DDX499093.824Ursus_maritimus
ENSMUSG00000057788Ddx499991.232ENSVVUG00000007767DDX499194.298Vulpes_vulpes
ENSMUSG00000057788Ddx499581.579ENSXETG00000010135ddx499481.579Xenopus_tropicalis
ENSMUSG00000057788Ddx498374.750ENSXCOG00000005756ddx499374.750Xiphophorus_couchianus
ENSMUSG00000057788Ddx499577.899ENSXMAG00000002554ddx499677.899Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000166nucleotide binding-IEAFunction
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding-IEAFunction
GO:0004386helicase activity-IEAFunction
GO:0005524ATP binding-IEAFunction
GO:0016787hydrolase activity-IEAFunction

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