EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000058006 (Gene tree)
Gene ID: 100019
Gene Symbol: Mdn1
Alias: 4833432B22Rik|D4Abb1e|LOC213784
Full Name: midasin AAA ATPase 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 118099
Position: chr4: 32657119-32775217
Accession: 1926159
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000071642	-	17970	XM_006537476	ENSMUSP00000071569	5589 (aa)	XP_006537539	A2ANY6
ENSMUST00000124657	-	396	-	-	- (aa)	-	-
ENSMUST00000150934	-	1875	-	-	- (aa)	-	-
ENSMUST00000149941	-	943	-	-	- (aa)	-	-
ENSMUST00000125323	-	546	-	-	- (aa)	-	-
ENSMUST00000138577	-	2265	-	-	- (aa)	-	-
ENSMUST00000133403	-	679	-	-	- (aa)	-	-
ENSMUST00000124361	-	597	-	-	- (aa)	-	-
ENSMUST00000178134	-	17959	-	ENSMUSP00000136222	5582 (aa)	-	J3QMC5
ENSMUST00000151626	-	1508	-	-	- (aa)	-	-
ENSMUST00000136608	-	431	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000058006's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000058006's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000058006	Mdn1	99	82.201	ENSG00000112159	MDN1	98	98.361	Homo_sapiens
ENSMUSG00000058006	Mdn1	76	41.880	YLR106C	MDN1	80	41.880	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000027	ribosomal large subunit assembly	21873635.	IBA	Process
GO:0003674	molecular_function	-	ND	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0045111	intermediate filament cytoskeleton	-	ISO	Component