EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000058013 (Gene tree)
Gene ID: 52398
Gene Symbol: Sept11
Alias: 6230410I01Rik|D5Ertd606e
Full Name: septin 11
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 83011 bases
Position: chr5:93093437-93176447
Accession: 1277214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000144136	MMR_HSR1	PF01926.23	8.8e-07	1	1
ENSMUSP00000143901	MMR_HSR1	PF01926.23	2.7e-06	1	1
ENSMUSP00000074293	MMR_HSR1	PF01926.23	2.7e-06	1	1
ENSMUSP00000143928	MMR_HSR1	PF01926.23	2.8e-06	1	1
ENSMUSP00000144235	MMR_HSR1	PF01926.23	2.8e-06	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000201700	-	3478	XM_006535102	ENSMUSP00000143901	425 (aa)	XP_006535165	A0A0J9YTY0
ENSMUST00000202308	-	1792	XM_006535103	ENSMUSP00000144136	425 (aa)	XP_006535166	Q8C1B7
ENSMUST00000202217	-	1380	XM_006535098	ENSMUSP00000144235	432 (aa)	XP_006535161	A0A0J9YUL3
ENSMUST00000201695	-	1119	-	-	- (aa)	-	-
ENSMUST00000202196	-	1066	-	ENSMUSP00000144573	204 (aa)	-	A0A0J9YVA6
ENSMUST00000201421	-	2428	XM_006535100	ENSMUSP00000143928	431 (aa)	XP_006535163	Q8C1B7
ENSMUST00000201377	-	640	-	-	- (aa)	-	-
ENSMUST00000202415	-	434	-	ENSMUSP00000144360	97 (aa)	-	A0A0J9YUV6
ENSMUST00000074733	-	5028	XM_011249532	ENSMUSP00000074293	429 (aa)	XP_011247834	Q8C1B7

Gene Model

Click here to download ENSMUSG00000058013's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05100	Bacterial invasion of epithelial cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000058013's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000058013	Sept11	67	42.953	ENSMUSG00000059248	Sept9	87	43.686
ENSMUSG00000058013	Sept11	76	40.762	ENSMUSG00000000486	Sept1	100	40.816
ENSMUSG00000058013	Sept11	67	43.878	ENSMUSG00000020486	Sept4	93	43.878
ENSMUSG00000058013	Sept11	69	43.234	ENSMUSG00000116048	Sept2	94	40.656
ENSMUSG00000058013	Sept11	68	42.809	ENSMUSG00000116594	AC133488.1	81	42.809
ENSMUSG00000058013	Sept11	76	41.493	ENSMUSG00000072214	Sept5	99	41.732
ENSMUSG00000058013	Sept11	99	39.954	ENSMUSG00000001833	Sept7	80	41.737
ENSMUSG00000058013	Sept11	98	72.771	ENSMUSG00000019917	Sept10	85	76.712
ENSMUSG00000058013	Sept11	70	39.934	ENSMUSG00000022542	Sept12	94	37.931
ENSMUSG00000058013	Sept11	99	79.157	ENSMUSG00000018398	Sept8	88	81.915
ENSMUSG00000058013	Sept11	69	44.000	ENSMUSG00000022456	Sept3	89	44.000
ENSMUSG00000058013	Sept11	100	82.201	ENSMUSG00000050379	Sept6	100	82.028
ENSMUSG00000058013	Sept11	69	43.234	ENSMUSG00000026276	Sept2	100	42.202

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000058013	Sept11	100	99.769	ENSG00000138758	SEPT11	100	99.769	Homo_sapiens
ENSMUSG00000058013	Sept11	91	98.446	ENSAMEG00000013821	SEPT11	98	98.196	Ailuropoda_melanoleuca
ENSMUSG00000058013	Sept11	98	97.596	ENSAPLG00000010395	SEPT11	98	97.596	Anas_platyrhynchos
ENSMUSG00000058013	Sept11	100	97.412	ENSACAG00000012255	SEPT11	100	96.970	Anolis_carolinensis
ENSMUSG00000058013	Sept11	100	99.769	ENSANAG00000029750	SEPT11	100	99.769	Aotus_nancymaae
ENSMUSG00000058013	Sept11	100	99.769	ENSBTAG00000021372	SEPT11	100	99.769	Bos_taurus
ENSMUSG00000058013	Sept11	100	99.769	ENSCJAG00000014744	SEPT11	100	99.769	Callithrix_jacchus
ENSMUSG00000058013	Sept11	98	99.760	ENSCAFG00020011148	SEPT11	99	99.760	Canis_lupus_dingo
ENSMUSG00000058013	Sept11	100	99.765	ENSCHIG00000021075	SEPT11	100	99.534	Capra_hircus
ENSMUSG00000058013	Sept11	100	99.306	ENSTSYG00000013404	-	100	99.306	Carlito_syrichta
ENSMUSG00000058013	Sept11	97	90.544	ENSCAPG00000015684	SEPT11	98	90.544	Cavia_aperea
ENSMUSG00000058013	Sept11	100	99.059	ENSCPOG00000009037	SEPT11	100	99.059	Cavia_porcellus
ENSMUSG00000058013	Sept11	100	99.769	ENSCCAG00000022420	SEPT11	100	99.769	Cebus_capucinus
ENSMUSG00000058013	Sept11	100	99.769	ENSCATG00000027299	SEPT11	100	99.769	Cercocebus_atys
ENSMUSG00000058013	Sept11	98	99.279	ENSCLAG00000006114	SEPT11	99	99.279	Chinchilla_lanigera
ENSMUSG00000058013	Sept11	100	99.765	ENSCSAG00000004591	SEPT11	100	99.534	Chlorocebus_sabaeus
ENSMUSG00000058013	Sept11	100	97.454	ENSCPBG00000019417	SEPT11	100	97.454	Chrysemys_picta_bellii
ENSMUSG00000058013	Sept11	100	99.769	ENSCANG00000032458	SEPT11	100	99.769	Colobus_angolensis_palliatus
ENSMUSG00000058013	Sept11	100	99.306	ENSCGRG00001000184	Sept11	100	99.306	Cricetulus_griseus_chok1gshd
ENSMUSG00000058013	Sept11	100	99.059	ENSCGRG00000002281	Sept11	100	99.059	Cricetulus_griseus_crigri
ENSMUSG00000058013	Sept11	100	99.537	ENSDNOG00000003551	SEPT11	100	99.537	Dasypus_novemcinctus
ENSMUSG00000058013	Sept11	100	99.769	ENSDORG00000015527	Sept11	100	99.769	Dipodomys_ordii
ENSMUSG00000058013	Sept11	83	100.000	ENSETEG00000000950	SEPT11	85	100.000	Echinops_telfairi
ENSMUSG00000058013	Sept11	99	82.783	ENSEBUG00000003985	SEPT11	93	84.171	Eptatretus_burgeri
ENSMUSG00000058013	Sept11	100	99.074	ENSEASG00005016442	SEPT11	100	99.074	Equus_asinus_asinus
ENSMUSG00000058013	Sept11	100	99.529	ENSECAG00000005768	SEPT11	100	99.301	Equus_caballus
ENSMUSG00000058013	Sept11	100	99.769	ENSFCAG00000027412	SEPT11	100	99.769	Felis_catus
ENSMUSG00000058013	Sept11	98	97.837	ENSFALG00000008500	SEPT11	94	97.837	Ficedula_albicollis
ENSMUSG00000058013	Sept11	98	99.291	ENSFDAG00000020305	SEPT11	100	99.291	Fukomys_damarensis
ENSMUSG00000058013	Sept11	100	97.176	ENSGALG00000011476	SEPT11	97	97.196	Gallus_gallus
ENSMUSG00000058013	Sept11	100	97.685	ENSGAGG00000025821	SEPT11	100	97.685	Gopherus_agassizii
ENSMUSG00000058013	Sept11	100	99.769	ENSGGOG00000015115	SEPT11	100	99.769	Gorilla_gorilla
ENSMUSG00000058013	Sept11	100	99.294	ENSHGLG00000015983	SEPT11	100	99.294	Heterocephalus_glaber_female
ENSMUSG00000058013	Sept11	98	99.041	ENSHGLG00100018878	SEPT11	98	99.041	Heterocephalus_glaber_male
ENSMUSG00000058013	Sept11	100	99.306	ENSSTOG00000008117	SEPT11	100	99.306	Ictidomys_tridecemlineatus
ENSMUSG00000058013	Sept11	100	99.769	ENSJJAG00000007698	Sept11	100	99.769	Jaculus_jaculus
ENSMUSG00000058013	Sept11	92	94.103	ENSLACG00000006461	SEPT11	93	94.315	Latimeria_chalumnae
ENSMUSG00000058013	Sept11	100	99.768	ENSLAFG00000016488	SEPT11	100	99.768	Loxodonta_africana
ENSMUSG00000058013	Sept11	100	99.769	ENSMFAG00000042066	SEPT11	100	99.769	Macaca_fascicularis
ENSMUSG00000058013	Sept11	100	99.765	ENSMMUG00000019901	SEPT11	100	99.534	Macaca_mulatta
ENSMUSG00000058013	Sept11	100	99.765	ENSMNEG00000044831	SEPT11	100	99.534	Macaca_nemestrina
ENSMUSG00000058013	Sept11	100	99.769	ENSMLEG00000041438	SEPT11	100	99.769	Mandrillus_leucophaeus
ENSMUSG00000058013	Sept11	94	96.482	ENSMGAG00000009422	SEPT11	92	96.725	Meleagris_gallopavo
ENSMUSG00000058013	Sept11	100	99.529	ENSMAUG00000008193	Sept11	100	99.529	Mesocricetus_auratus
ENSMUSG00000058013	Sept11	100	96.528	ENSMICG00000033844	SEPT11	100	96.528	Microcebus_murinus
ENSMUSG00000058013	Sept11	100	100.000	ENSMOCG00000014932	Sept11	100	100.000	Microtus_ochrogaster
ENSMUSG00000058013	Sept11	100	98.353	ENSMODG00000011825	SEPT11	100	98.135	Monodelphis_domestica
ENSMUSG00000058013	Sept11	100	100.000	MGP_CAROLIEiJ_G0027424	Sept11	100	100.000	Mus_caroli
ENSMUSG00000058013	Sept11	100	99.765	MGP_PahariEiJ_G0017202	Sept11	100	99.765	Mus_pahari
ENSMUSG00000058013	Sept11	100	100.000	MGP_SPRETEiJ_G0028421	Sept11	100	100.000	Mus_spretus
ENSMUSG00000058013	Sept11	98	97.163	ENSMPUG00000008207	SEPT11	98	97.163	Mustela_putorius_furo
ENSMUSG00000058013	Sept11	52	99.103	ENSMLUG00000024451	-	97	99.103	Myotis_lucifugus
ENSMUSG00000058013	Sept11	100	99.074	ENSNGAG00000000462	Sept11	100	99.074	Nannospalax_galili
ENSMUSG00000058013	Sept11	100	99.765	ENSNLEG00000032040	SEPT11	100	99.534	Nomascus_leucogenys
ENSMUSG00000058013	Sept11	100	87.529	ENSMEUG00000013950	-	100	87.413	Notamacropus_eugenii
ENSMUSG00000058013	Sept11	80	100.000	ENSOPRG00000000156	SEPT11	80	100.000	Ochotona_princeps
ENSMUSG00000058013	Sept11	100	98.843	ENSODEG00000000877	SEPT11	100	98.843	Octodon_degus
ENSMUSG00000058013	Sept11	98	95.663	ENSOANG00000013643	SEPT11	94	96.410	Ornithorhynchus_anatinus
ENSMUSG00000058013	Sept11	100	99.529	ENSOCUG00000001289	SEPT11	90	99.529	Oryctolagus_cuniculus
ENSMUSG00000058013	Sept11	99	98.372	ENSOGAG00000005210	SEPT11	100	98.372	Otolemur_garnettii
ENSMUSG00000058013	Sept11	98	99.760	ENSOARG00000017493	SEPT11	94	99.524	Ovis_aries
ENSMUSG00000058013	Sept11	100	99.765	ENSPPAG00000041700	SEPT11	100	99.534	Pan_paniscus
ENSMUSG00000058013	Sept11	100	99.769	ENSPPRG00000007487	SEPT11	100	99.769	Panthera_pardus
ENSMUSG00000058013	Sept11	100	99.769	ENSPTIG00000017796	SEPT11	100	99.769	Panthera_tigris_altaica
ENSMUSG00000058013	Sept11	100	99.765	ENSPTRG00000016192	SEPT11	100	99.534	Pan_troglodytes
ENSMUSG00000058013	Sept11	100	99.769	ENSPANG00000021634	SEPT11	100	99.769	Papio_anubis
ENSMUSG00000058013	Sept11	99	96.690	ENSPSIG00000017552	SEPT11	99	96.028	Pelodiscus_sinensis
ENSMUSG00000058013	Sept11	100	100.000	ENSPEMG00000016338	Sept11	100	100.000	Peromyscus_maniculatus_bairdii
ENSMUSG00000058013	Sept11	100	98.824	ENSPCIG00000028014	SEPT11	100	98.601	Phascolarctos_cinereus
ENSMUSG00000058013	Sept11	100	99.765	ENSPPYG00000014864	SEPT11	98	99.765	Pongo_abelii
ENSMUSG00000058013	Sept11	83	100.000	ENSPCAG00000004069	SEPT11	85	100.000	Procavia_capensis
ENSMUSG00000058013	Sept11	100	99.074	ENSPCOG00000014774	SEPT11	100	99.074	Propithecus_coquereli
ENSMUSG00000058013	Sept11	100	100.000	ENSRNOG00000002182	Sept11	100	100.000	Rattus_norvegicus
ENSMUSG00000058013	Sept11	100	99.769	ENSRBIG00000024343	SEPT11	100	99.769	Rhinopithecus_bieti
ENSMUSG00000058013	Sept11	100	99.769	ENSRROG00000038768	SEPT11	100	99.769	Rhinopithecus_roxellana
ENSMUSG00000058013	Sept11	100	99.765	ENSSBOG00000020488	SEPT11	100	99.534	Saimiri_boliviensis_boliviensis
ENSMUSG00000058013	Sept11	100	98.824	ENSSHAG00000006125	SEPT11	100	98.601	Sarcophilus_harrisii
ENSMUSG00000058013	Sept11	98	97.115	ENSSPUG00000006377	SEPT11	98	97.115	Sphenodon_punctatus
ENSMUSG00000058013	Sept11	100	99.537	ENSSSCG00000008986	SEPT11	100	99.537	Sus_scrofa
ENSMUSG00000058013	Sept11	91	95.855	ENSTGUG00000001707	-	83	95.855	Taeniopygia_guttata
ENSMUSG00000058013	Sept11	77	100.000	ENSTBEG00000012851	SEPT11	79	99.545	Tupaia_belangeri
ENSMUSG00000058013	Sept11	85	100.000	ENSTTRG00000014833	SEPT11	85	100.000	Tursiops_truncatus
ENSMUSG00000058013	Sept11	100	99.769	ENSUAMG00000017287	SEPT11	100	99.769	Ursus_americanus
ENSMUSG00000058013	Sept11	100	98.588	ENSUMAG00000007904	SEPT11	95	98.588	Ursus_maritimus
ENSMUSG00000058013	Sept11	99	98.585	ENSVVUG00000023346	SEPT11	99	99.520	Vulpes_vulpes
ENSMUSG00000058013	Sept11	100	92.575	ENSXETG00000006404	sept11	99	92.791	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0001725	stress fiber	-	ISO	Component
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0005515	protein binding	18809578.24113571.	IPI	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005940	septin ring	21873635.	IBA	Component
GO:0007049	cell cycle	-	IEA	Process
GO:0015630	microtubule cytoskeleton	21873635.	IBA	Component
GO:0030054	cell junction	-	IEA	Component
GO:0031105	septin complex	21873635.	IBA	Component
GO:0031105	septin complex	18809578.	IDA	Component
GO:0042995	cell projection	-	IEA	Component
GO:0045202	synapse	-	IEA	Component
GO:0050807	regulation of synapse organization	-	ISO	Process
GO:0051291	protein heterooligomerization	-	ISO	Process
GO:0051301	cell division	-	IEA	Process
GO:0060090	molecular adaptor activity	21873635.	IBA	Function
GO:0061640	cytoskeleton-dependent cytokinesis	21873635.	IBA	Process
GO:0098794	postsynapse	-	ISO	Component
GO:0098978	glutamatergic synapse	-	ISO	Component
GO:0098982	GABA-ergic synapse	-	ISO	Component
GO:0099629	postsynaptic specialization of symmetric synapse	-	ISO	Component