EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000059119 (Gene tree)
Gene ID: 17955
Gene Symbol: Nap1l4
Alias: 2810410H14Rik|D7Wsu30e|Nap2
Full Name: nucleosome assembly protein 1-like 4
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 35528
Position: chr7: 143513579-143549106
Accession: 1316687
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000209098	-	2281	XM_006508504	ENSMUSP00000146474	386 (aa)	XP_006508567	B7ZNL2
ENSMUST00000207244	-	659	-	-	- (aa)	-	-
ENSMUST00000208093	-	352	-	ENSMUSP00000147062	75 (aa)	-	A0A140LJ37
ENSMUST00000072727	-	2285	-	ENSMUSP00000072510	375 (aa)	-	Q78ZA7
ENSMUST00000207870	-	185	-	ENSMUSP00000146639	43 (aa)	-	A0A140LI20
ENSMUST00000208282	-	661	-	-	- (aa)	-	-
ENSMUST00000208317	-	658	-	ENSMUSP00000147149	219 (aa)	-	A0A140LJB5
ENSMUST00000207948	-	341	-	ENSMUSP00000146710	58 (aa)	-	A0A140LI78
ENSMUST00000208190	-	2259	XM_006508506	ENSMUSP00000147130	386 (aa)	XP_006508569	B7ZNL2

Gene Model

Click here to download ENSMUSG00000059119's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000059119's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000059119	Nap1l4	100	94.819	ENSG00000205531	NAP1L4	99	97.015	Homo_sapiens
ENSMUSG00000059119	Nap1l4	99	66.234	ENSG00000187109	NAP1L1	100	73.460	Homo_sapiens
ENSMUSG00000059119	Nap1l4	79	84.783	ENSMUSG00000058799	Nap1l1	91	69.529	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006334	nucleosome assembly	28366643.	IDA	Process
GO:0006334	nucleosome assembly	-	ISO	Process
GO:0030425	dendrite	-	ISO	Component
GO:0031491	nucleosome binding	-	ISO	Function
GO:0043025	neuronal cell body	-	ISO	Component