EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000059334 (Gene tree)
Gene ID: 333473
Gene Symbol: Zfp36l3
Alias: -
Full Name: zinc finger protein 36%2C C3H type-like 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 2347 bases
Position: chrX:53774048-53776394
Accession: 3525151
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000071630	zf-CCCH	PF00642.24	9.8e-17	1	2
ENSMUSP00000071630	zf-CCCH	PF00642.24	9.8e-17	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000071711	-	2347	-	ENSMUSP00000071630	725 (aa)	-	Q5ISE2

Gene Model

Click here to download ENSMUSG00000059334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000059334's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000059334	Zfp36l3	51	91.599	MGP_CAROLIEiJ_G0033081	Zfp36l3	52	91.599	Mus_caroli
ENSMUSG00000059334	Zfp36l3	100	75.364	MGP_PahariEiJ_G0031623	-	52	80.723	Mus_pahari
ENSMUSG00000059334	Zfp36l3	51	98.645	MGP_SPRETEiJ_G0034237	Zfp36l3	53	98.645	Mus_spretus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000288	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	15814898.	IDA	Process
GO:0000289	nuclear-transcribed mRNA poly(A) tail shortening	15814898.	IDA	Process
GO:0003677	DNA binding	-	IEA	Function
GO:0003723	RNA binding	18367448.	IDA	Function
GO:0003730	mRNA 3'-UTR binding	21873635.	IBA	Function
GO:0005737	cytoplasm	15814898.18367448.	IDA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0017091	AU-rich element binding	15814898.	IDA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0061158	3'-UTR-mediated mRNA destabilization	21873635.	IBA	Process