EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000059447 (Gene tree)
Gene ID: 231086
Gene Symbol: Hadhb
Alias: 4930479F15Rik|Mtpb
Full Name: hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein)%2C beta subunit
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 29346
Position: chr5: 30155248-30184593
Accession: 2136381
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000141236	-	507	-	-	- (aa)	-	-
ENSMUST00000114786	-	2048	XM_017320828	ENSMUSP00000110434	475 (aa)	XP_017176317	Q99JY0
ENSMUST00000026841	-	2033	-	ENSMUSP00000026841	475 (aa)	-	Q99JY0
ENSMUST00000197109	-	763	-	ENSMUSP00000142868	41 (aa)	-	A0A0G2JER1
ENSMUST00000114783	-	2045	-	ENSMUSP00000110431	475 (aa)	-	Q99JY0
ENSMUST00000122934	-	514	-	-	- (aa)	-	-
ENSMUST00000133414	-	425	-	-	- (aa)	-	-
ENSMUST00000127364	-	4388	-	-	- (aa)	-	-
ENSMUST00000123980	-	610	-	ENSMUSP00000118296	173 (aa)	-	D3YXU1

Gene Model

Click here to download ENSMUSG00000059447's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00062	Fatty acid elongation	KEGG
mmu00071	Fatty acid degradation	KEGG
mmu00280	Valine, leucine and isoleucine degradation	KEGG
mmu01100	Metabolic pathways	KEGG
mmu01212	Fatty acid metabolism	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000059447's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000059447	Hadhb	91	61.468	WBGene00015125	B0303.3	97	61.468	Caenorhabditis_elegans
ENSMUSG00000059447	Hadhb	90	68.618	FBgn0025352	Thiolase	91	68.618	Drosophila_melanogaster
ENSMUSG00000059447	Hadhb	88	30.233	FBgn0035203	CG9149	99	30.233	Drosophila_melanogaster
ENSMUSG00000059447	Hadhb	88	31.002	FBgn0040064	yip2	98	31.002	Drosophila_melanogaster
ENSMUSG00000059447	Hadhb	99	91.121	ENSG00000138029	HADHB	99	95.588	Homo_sapiens
ENSMUSG00000059447	Hadhb	89	33.566	ENSG00000167315	ACAA2	99	33.566	Homo_sapiens
ENSMUSG00000059447	Hadhb	89	32.483	ENSG00000075239	ACAT1	92	32.483	Homo_sapiens
ENSMUSG00000059447	Hadhb	95	33.117	ENSMUSG00000036138	Acaa1a	96	33.117	Mus_musculus
ENSMUSG00000059447	Hadhb	88	31.469	YPL028W	ERG10	99	31.469	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000062	fatty-acyl-CoA binding	-	ISO	Function
GO:0003824	catalytic activity	-	IEA	Function
GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity	-	ISO	Function
GO:0003988	acetyl-CoA C-acyltransferase activity	21873635.	IBA	Function
GO:0003988	acetyl-CoA C-acyltransferase activity	15240869.	IDA	Function
GO:0003988	acetyl-CoA C-acyltransferase activity	17116638.	IMP	Function
GO:0003988	acetyl-CoA C-acyltransferase activity	-	ISO	Function
GO:0004300	enoyl-CoA hydratase activity	21873635.	IBA	Function
GO:0004300	enoyl-CoA hydratase activity	-	ISO	Function
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	17116638.	IMP	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005739	mitochondrion	11390422.	TAS	Component
GO:0005741	mitochondrial outer membrane	-	ISO	Component
GO:0005743	mitochondrial inner membrane	12865426.	HDA	Component
GO:0005743	mitochondrial inner membrane	-	ISO	Component
GO:0005783	endoplasmic reticulum	-	ISO	Component
GO:0006629	lipid metabolic process	-	IEA	Process
GO:0006631	fatty acid metabolic process	-	IEA	Process
GO:0006635	fatty acid beta-oxidation	21873635.	IBA	Process
GO:0006635	fatty acid beta-oxidation	-	ISO	Process
GO:0006635	fatty acid beta-oxidation	11390422.	TAS	Process
GO:0016020	membrane	-	IEA	Component
GO:0016507	mitochondrial fatty acid beta-oxidation multienzyme complex	17116638.	IC	Component
GO:0016507	mitochondrial fatty acid beta-oxidation multienzyme complex	-	ISO	Component
GO:0016508	long-chain-enoyl-CoA hydratase activity	21873635.	IBA	Function
GO:0016508	long-chain-enoyl-CoA hydratase activity	-	ISO	Function
GO:0016509	long-chain-3-hydroxyacyl-CoA dehydrogenase activity	21873635.	IBA	Function
GO:0016509	long-chain-3-hydroxyacyl-CoA dehydrogenase activity	17116638.	IMP	Function
GO:0016509	long-chain-3-hydroxyacyl-CoA dehydrogenase activity	-	ISO	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0016746	transferase activity, transferring acyl groups	-	IEA	Function
GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	-	IEA	Function
GO:0042645	mitochondrial nucleoid	-	ISO	Component
GO:0044877	protein-containing complex binding	-	ISO	Function
GO:0051287	NAD binding	-	ISO	Function