EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000060093 (Gene tree)
Gene ID: 326619
Gene Symbol: Hist1h4a
Alias: -
Full Name: histone cluster 1%2C H4a
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 539
Position: chr13: 23760692-23761230
Accession: 2448419
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000102964	-	539	-	ENSMUSP00000100029	103 (aa)	-	P62806

Gene Model

Click here to download ENSMUSG00000060093's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05034	Alcoholism	KEGG
mmu05203	Viral carcinogenesis	KEGG
mmu05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000060093's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000060093	Hist1h4a	100	100.000	ENSG00000277157	HIST1H4D	100	100.000	Homo_sapiens
ENSMUSG00000060093	Hist1h4a	100	100.000	ENSG00000278637	HIST1H4A	100	100.000	Homo_sapiens
ENSMUSG00000060093	Hist1h4a	100	100.000	ENSG00000273542	HIST1H4K	100	100.000	Homo_sapiens
ENSMUSG00000060093	Hist1h4a	100	100.000	ENSG00000158406	HIST1H4H	100	100.000	Homo_sapiens
ENSMUSG00000060093	Hist1h4a	100	100.000	ENSG00000197238	HIST1H4J	100	100.000	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000228	nuclear chromosome	-	ISO	Component
GO:0000786	nucleosome	-	ISO	Component
GO:0000788	nuclear nucleosome	-	ISO	Component
GO:0005634	nucleus	-	ISO	Component
GO:0006334	nucleosome assembly	-	ISO	Process
GO:0006335	DNA replication-dependent nucleosome assembly	-	ISO	Process
GO:0006336	DNA replication-independent nucleosome assembly	-	ISO	Process
GO:0019904	protein domain specific binding	-	ISO	Function
GO:0032991	protein-containing complex	-	ISO	Component
GO:0045653	negative regulation of megakaryocyte differentiation	-	ISO	Process
GO:0051290	protein heterotetramerization	-	ISO	Process