EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000060126 (Gene tree)
Gene ID: 22070
Gene Symbol: Tpt1
Alias: TCTP|Trt|fortilin
Full Name: tumor protein%2C translationally-controlled 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 3433
Position: chr14: 75845093-75848525
Accession: 104890
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000134040	-	661	-	-	- (aa)	-	-
ENSMUST00000150047	-	890	-	-	- (aa)	-	-
ENSMUST00000110894	-	1169	-	ENSMUSP00000106519	172 (aa)	-	P63028
ENSMUST00000142061	-	996	-	ENSMUSP00000121225	138 (aa)	-	D3YU75
ENSMUST00000128889	-	478	-	-	- (aa)	-	-
ENSMUST00000151751	-	559	-	-	- (aa)	-	-
ENSMUST00000125146	-	503	-	-	- (aa)	-	-
ENSMUST00000154533	-	762	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000060126's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000060126's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000060126	Tpt1	100	36.957	WBGene00009122	tct-1	100	36.957	Caenorhabditis_elegans
ENSMUSG00000060126	Tpt1	100	95.930	ENSG00000133112	TPT1	100	95.930	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000922	spindle pole	-	ISO	Component
GO:0005509	calcium ion binding	21873635.	IBA	Function
GO:0005509	calcium ion binding	-	ISO	Function
GO:0005515	protein binding	21048921.	IPI	Function
GO:0005615	extracellular space	24006456.	HDA	Component
GO:0005615	extracellular space	15319436.	ISO	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	21076177.	IDA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005771	multivesicular body	15319436.	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005881	cytoplasmic microtubule	-	ISO	Component
GO:0008134	transcription factor binding	21076177.	IPI	Function
GO:0019827	stem cell population maintenance	21076177.	IMP	Process
GO:1902230	negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage	-	ISO	Process
GO:2000384	negative regulation of ectoderm development	21076177.	IMP	Process