EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000060152 (Gene tree)
Gene ID: 117109
Gene Symbol: Pop5
Alias: 1500019J17Rik|2700077E03Rik|Rnasep3
Full Name: processing of precursor 5%2C ribonuclease P/MRP family (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 9516 bases
Position: chr5:115235836-115245351
Accession: 2151221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000080215	RNase_P_Rpp14	PF01900.19	8.6e-25	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000142233	-	529	-	-	- (aa)	-	-
ENSMUST00000140083	-	428	-	-	- (aa)	-	-
ENSMUST00000154800	-	380	-	-	- (aa)	-	-
ENSMUST00000135455	-	1587	-	ENSMUSP00000118408	169 (aa)	-	Q9DB28
ENSMUST00000081497	-	1025	XM_017320619	ENSMUSP00000080215	169 (aa)	XP_017176108	Q9DB28
ENSMUST00000128830	-	575	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000060152's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03008	Ribosome biogenesis in eukaryotes	KEGG
mmu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000060152's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000060152	Pop5	88	93.243	ENSG00000167272	POP5	100	86.982	Homo_sapiens
ENSMUSG00000060152	Pop5	84	54.225	ENSAPOG00000023686	POP5	99	50.602	Acanthochromis_polyacanthus
ENSMUSG00000060152	Pop5	100	83.721	ENSAMEG00000008503	POP5	100	83.721	Ailuropoda_melanoleuca
ENSMUSG00000060152	Pop5	84	54.930	ENSACIG00000018362	pop5	99	52.121	Amphilophus_citrinellus
ENSMUSG00000060152	Pop5	84	53.521	ENSAOCG00000001930	pop5	99	50.909	Amphiprion_ocellaris
ENSMUSG00000060152	Pop5	84	53.521	ENSAPEG00000006795	pop5	99	50.909	Amphiprion_percula
ENSMUSG00000060152	Pop5	91	53.247	ENSATEG00000016792	pop5	99	51.205	Anabas_testudineus
ENSMUSG00000060152	Pop5	53	74.157	ENSAPLG00000015761	POP5	100	67.257	Anas_platyrhynchos
ENSMUSG00000060152	Pop5	96	56.173	ENSACAG00000003091	POP5	97	56.173	Anolis_carolinensis
ENSMUSG00000060152	Pop5	88	92.568	ENSANAG00000023744	POP5	100	85.799	Aotus_nancymaae
ENSMUSG00000060152	Pop5	89	53.642	ENSACLG00000021131	-	99	53.012	Astatotilapia_calliptera
ENSMUSG00000060152	Pop5	89	53.642	ENSAMXG00000038175	pop5	94	50.307	Astyanax_mexicanus
ENSMUSG00000060152	Pop5	100	85.294	ENSBTAG00000005385	POP5	100	85.294	Bos_taurus
ENSMUSG00000060152	Pop5	88	92.568	ENSCJAG00000001309	POP5	100	85.799	Callithrix_jacchus
ENSMUSG00000060152	Pop5	100	85.882	ENSCAFG00000010389	POP5	100	85.882	Canis_familiaris
ENSMUSG00000060152	Pop5	100	85.882	ENSCAFG00020020663	POP5	100	85.882	Canis_lupus_dingo
ENSMUSG00000060152	Pop5	100	86.471	ENSCHIG00000016402	POP5	100	86.471	Capra_hircus
ENSMUSG00000060152	Pop5	100	88.166	ENSTSYG00000027616	POP5	100	88.166	Carlito_syrichta
ENSMUSG00000060152	Pop5	67	85.088	ENSCAPG00000016873	POP5	100	85.088	Cavia_aperea
ENSMUSG00000060152	Pop5	100	85.799	ENSCPOG00000012337	POP5	100	85.799	Cavia_porcellus
ENSMUSG00000060152	Pop5	88	91.892	ENSCCAG00000023154	POP5	100	84.615	Cebus_capucinus
ENSMUSG00000060152	Pop5	88	93.243	ENSCATG00000036825	POP5	100	86.391	Cercocebus_atys
ENSMUSG00000060152	Pop5	100	88.757	ENSCLAG00000007808	POP5	100	88.757	Chinchilla_lanigera
ENSMUSG00000060152	Pop5	88	93.243	ENSCSAG00000002246	POP5	100	86.391	Chlorocebus_sabaeus
ENSMUSG00000060152	Pop5	86	74.483	ENSCHOG00000013969	POP5	100	71.176	Choloepus_hoffmanni
ENSMUSG00000060152	Pop5	96	67.485	ENSCPBG00000011331	POP5	96	67.485	Chrysemys_picta_bellii
ENSMUSG00000060152	Pop5	88	92.568	ENSCANG00000028001	POP5	100	85.799	Colobus_angolensis_palliatus
ENSMUSG00000060152	Pop5	100	94.083	ENSCGRG00001017974	Pop5	100	94.083	Cricetulus_griseus_chok1gshd
ENSMUSG00000060152	Pop5	100	94.083	ENSCGRG00000010102	Pop5	100	94.083	Cricetulus_griseus_crigri
ENSMUSG00000060152	Pop5	81	56.934	ENSCSEG00000011103	pop5	91	56.934	Cynoglossus_semilaevis
ENSMUSG00000060152	Pop5	91	53.247	ENSCSEG00000008332	-	99	52.096	Cynoglossus_semilaevis
ENSMUSG00000060152	Pop5	90	39.869	ENSCVAG00000009152	-	90	39.216	Cyprinodon_variegatus
ENSMUSG00000060152	Pop5	88	54.605	ENSDARG00000053452	pop5	98	52.976	Danio_rerio
ENSMUSG00000060152	Pop5	100	85.294	ENSDNOG00000045952	-	100	86.471	Dasypus_novemcinctus
ENSMUSG00000060152	Pop5	100	84.302	ENSDNOG00000012668	-	90	85.465	Dasypus_novemcinctus
ENSMUSG00000060152	Pop5	100	87.574	ENSDORG00000029401	Pop5	100	87.574	Dipodomys_ordii
ENSMUSG00000060152	Pop5	84	30.282	FBgn0036696	CG14057	95	30.282	Drosophila_melanogaster
ENSMUSG00000060152	Pop5	99	83.234	ENSETEG00000009283	POP5	99	83.234	Echinops_telfairi
ENSMUSG00000060152	Pop5	87	40.816	ENSEBUG00000016369	pop5	90	40.816	Eptatretus_burgeri
ENSMUSG00000060152	Pop5	100	84.706	ENSEASG00005004714	POP5	100	85.882	Equus_asinus_asinus
ENSMUSG00000060152	Pop5	100	84.706	ENSECAG00000010012	POP5	100	85.882	Equus_caballus
ENSMUSG00000060152	Pop5	96	53.374	ENSELUG00000023394	pop5	100	53.374	Esox_lucius
ENSMUSG00000060152	Pop5	100	85.294	ENSFCAG00000042614	POP5	100	85.294	Felis_catus
ENSMUSG00000060152	Pop5	89	68.874	ENSFALG00000007537	POP5	95	66.258	Ficedula_albicollis
ENSMUSG00000060152	Pop5	96	87.654	ENSFDAG00000009972	POP5	96	87.654	Fukomys_damarensis
ENSMUSG00000060152	Pop5	96	53.988	ENSFHEG00000022341	pop5	98	53.988	Fundulus_heteroclitus
ENSMUSG00000060152	Pop5	76	55.814	ENSGMOG00000001073	pop5	98	55.814	Gadus_morhua
ENSMUSG00000060152	Pop5	88	60.811	ENSGALG00000007124	POP5	56	58.282	Gallus_gallus
ENSMUSG00000060152	Pop5	84	58.451	ENSGAFG00000005937	-	97	55.215	Gambusia_affinis
ENSMUSG00000060152	Pop5	87	56.463	ENSGACG00000012710	-	90	56.463	Gasterosteus_aculeatus
ENSMUSG00000060152	Pop5	96	67.485	ENSGAGG00000016005	POP5	96	67.485	Gopherus_agassizii
ENSMUSG00000060152	Pop5	88	93.243	ENSGGOG00000013505	POP5	100	86.982	Gorilla_gorilla
ENSMUSG00000060152	Pop5	84	54.930	ENSHBUG00000011718	-	99	52.976	Haplochromis_burtoni
ENSMUSG00000060152	Pop5	100	85.207	ENSHGLG00000011786	POP5	100	85.207	Heterocephalus_glaber_female
ENSMUSG00000060152	Pop5	100	85.207	ENSHGLG00100014284	POP5	100	85.207	Heterocephalus_glaber_male
ENSMUSG00000060152	Pop5	84	53.521	ENSHCOG00000011809	pop5	99	49.693	Hippocampus_comes
ENSMUSG00000060152	Pop5	89	50.667	ENSIPUG00000003437	pop5	100	48.810	Ictalurus_punctatus
ENSMUSG00000060152	Pop5	100	89.349	ENSSTOG00000012577	POP5	100	89.349	Ictidomys_tridecemlineatus
ENSMUSG00000060152	Pop5	100	84.211	ENSJJAG00000001080	Pop5	100	86.550	Jaculus_jaculus
ENSMUSG00000060152	Pop5	87	51.701	ENSKMAG00000011158	-	99	49.704	Kryptolebias_marmoratus
ENSMUSG00000060152	Pop5	91	51.299	ENSLBEG00000008652	pop5	91	49.701	Labrus_bergylta
ENSMUSG00000060152	Pop5	84	64.085	ENSLACG00000018188	POP5	88	64.085	Latimeria_chalumnae
ENSMUSG00000060152	Pop5	84	54.225	ENSLOCG00000002924	pop5	98	50.909	Lepisosteus_oculatus
ENSMUSG00000060152	Pop5	100	86.550	ENSLAFG00000014545	POP5	100	86.550	Loxodonta_africana
ENSMUSG00000060152	Pop5	88	93.243	ENSMFAG00000045933	POP5	100	89.172	Macaca_fascicularis
ENSMUSG00000060152	Pop5	88	93.243	ENSMMUG00000040120	POP5	100	86.982	Macaca_mulatta
ENSMUSG00000060152	Pop5	88	93.243	ENSMNEG00000041716	POP5	100	86.982	Macaca_nemestrina
ENSMUSG00000060152	Pop5	88	92.568	ENSMLEG00000029377	POP5	100	86.391	Mandrillus_leucophaeus
ENSMUSG00000060152	Pop5	89	54.667	ENSMAMG00000002108	pop5	99	51.205	Mastacembelus_armatus
ENSMUSG00000060152	Pop5	84	54.930	ENSMZEG00005000069	-	99	52.976	Maylandia_zebra
ENSMUSG00000060152	Pop5	100	94.083	ENSMAUG00000019670	Pop5	100	94.083	Mesocricetus_auratus
ENSMUSG00000060152	Pop5	100	89.412	ENSMICG00000008692	POP5	100	91.176	Microcebus_murinus
ENSMUSG00000060152	Pop5	100	85.207	ENSMOCG00000013322	Pop5	100	85.207	Microtus_ochrogaster
ENSMUSG00000060152	Pop5	80	55.556	ENSMMOG00000010471	pop5	82	55.556	Mola_mola
ENSMUSG00000060152	Pop5	100	77.515	ENSMODG00000003066	POP5	68	77.515	Monodelphis_domestica
ENSMUSG00000060152	Pop5	84	55.634	ENSMALG00000017797	-	99	51.205	Monopterus_albus
ENSMUSG00000060152	Pop5	100	100.000	MGP_CAROLIEiJ_G0027618	Pop5	100	100.000	Mus_caroli
ENSMUSG00000060152	Pop5	100	97.041	MGP_PahariEiJ_G0024198	Pop5	100	97.041	Mus_pahari
ENSMUSG00000060152	Pop5	100	98.817	MGP_SPRETEiJ_G0028616	Pop5	100	98.817	Mus_spretus
ENSMUSG00000060152	Pop5	88	88.591	ENSMPUG00000003221	POP5	100	84.024	Mustela_putorius_furo
ENSMUSG00000060152	Pop5	86	89.865	ENSMLUG00000014657	POP5	99	86.905	Myotis_lucifugus
ENSMUSG00000060152	Pop5	100	90.000	ENSNGAG00000002594	Pop5	99	91.716	Nannospalax_galili
ENSMUSG00000060152	Pop5	66	54.464	ENSNBRG00000001020	-	83	54.464	Neolamprologus_brichardi
ENSMUSG00000060152	Pop5	88	92.568	ENSNLEG00000015839	POP5	100	86.982	Nomascus_leucogenys
ENSMUSG00000060152	Pop5	100	76.331	ENSMEUG00000015288	POP5	100	76.331	Notamacropus_eugenii
ENSMUSG00000060152	Pop5	86	91.781	ENSOPRG00000004327	POP5	99	87.059	Ochotona_princeps
ENSMUSG00000060152	Pop5	100	86.391	ENSODEG00000006549	-	100	86.391	Octodon_degus
ENSMUSG00000060152	Pop5	99	75.000	ENSODEG00000010351	-	100	75.000	Octodon_degus
ENSMUSG00000060152	Pop5	84	54.930	ENSONIG00000011172	pop5	99	53.571	Oreochromis_niloticus
ENSMUSG00000060152	Pop5	68	70.435	ENSOANG00000001792	-	100	72.174	Ornithorhynchus_anatinus
ENSMUSG00000060152	Pop5	99	85.799	ENSOCUG00000006537	POP5	99	85.799	Oryctolagus_cuniculus
ENSMUSG00000060152	Pop5	89	52.667	ENSORLG00000014745	pop5	90	52.667	Oryzias_latipes
ENSMUSG00000060152	Pop5	84	53.521	ENSORLG00020001168	pop5	85	53.521	Oryzias_latipes_hni
ENSMUSG00000060152	Pop5	80	55.882	ENSORLG00015013535	pop5	80	55.882	Oryzias_latipes_hsok
ENSMUSG00000060152	Pop5	96	50.602	ENSOMEG00000017643	pop5	99	50.602	Oryzias_melastigma
ENSMUSG00000060152	Pop5	88	89.933	ENSOGAG00000008528	POP5	91	89.933	Otolemur_garnettii
ENSMUSG00000060152	Pop5	100	85.465	ENSOARG00000012764	POP5	100	85.465	Ovis_aries
ENSMUSG00000060152	Pop5	88	93.243	ENSPPAG00000043719	POP5	100	86.982	Pan_paniscus
ENSMUSG00000060152	Pop5	100	85.294	ENSPPRG00000006474	POP5	100	85.294	Panthera_pardus
ENSMUSG00000060152	Pop5	100	85.294	ENSPTIG00000012194	POP5	100	85.294	Panthera_tigris_altaica
ENSMUSG00000060152	Pop5	88	93.243	ENSPTRG00000005543	POP5	100	86.982	Pan_troglodytes
ENSMUSG00000060152	Pop5	88	93.243	ENSPANG00000014166	POP5	100	86.982	Papio_anubis
ENSMUSG00000060152	Pop5	88	58.000	ENSPKIG00000025154	pop5	95	57.233	Paramormyrops_kingsleyae
ENSMUSG00000060152	Pop5	65	70.909	ENSPSIG00000013154	POP5	86	70.909	Pelodiscus_sinensis
ENSMUSG00000060152	Pop5	98	50.000	ENSPMGG00000000812	-	100	50.000	Periophthalmus_magnuspinnatus
ENSMUSG00000060152	Pop5	100	94.083	ENSPEMG00000017493	Pop5	100	94.083	Peromyscus_maniculatus_bairdii
ENSMUSG00000060152	Pop5	88	55.405	ENSPFOG00000013000	pop5	94	57.426	Poecilia_formosa
ENSMUSG00000060152	Pop5	84	55.634	ENSPLAG00000014070	pop5	85	55.634	Poecilia_latipinna
ENSMUSG00000060152	Pop5	87	55.782	ENSPMEG00000024039	pop5	97	53.374	Poecilia_mexicana
ENSMUSG00000060152	Pop5	87	55.782	ENSPMEG00000012863	POP5	97	53.374	Poecilia_mexicana
ENSMUSG00000060152	Pop5	84	57.042	ENSPREG00000020151	pop5	85	57.042	Poecilia_reticulata
ENSMUSG00000060152	Pop5	88	92.568	ENSPPYG00000005036	POP5	84	86.391	Pongo_abelii
ENSMUSG00000060152	Pop5	62	90.385	ENSPCAG00000004788	POP5	100	90.385	Procavia_capensis
ENSMUSG00000060152	Pop5	100	88.235	ENSPCOG00000017618	POP5	100	89.412	Propithecus_coquereli
ENSMUSG00000060152	Pop5	100	87.059	ENSPVAG00000002233	POP5	100	88.235	Pteropus_vampyrus
ENSMUSG00000060152	Pop5	84	54.930	ENSPNYG00000002679	pop5	99	52.976	Pundamilia_nyererei
ENSMUSG00000060152	Pop5	84	51.049	ENSPNAG00000012662	pop5	97	46.243	Pygocentrus_nattereri
ENSMUSG00000060152	Pop5	94	96.226	ENSRNOG00000001199	Pop5	100	95.858	Rattus_norvegicus
ENSMUSG00000060152	Pop5	86	91.781	ENSRBIG00000043505	POP5	96	90.728	Rhinopithecus_bieti
ENSMUSG00000060152	Pop5	88	91.892	ENSRROG00000045063	POP5	96	90.728	Rhinopithecus_roxellana
ENSMUSG00000060152	Pop5	88	92.568	ENSSBOG00000032691	POP5	100	91.176	Saimiri_boliviensis_boliviensis
ENSMUSG00000060152	Pop5	84	57.343	ENSSFOG00015005630	pop5	100	54.706	Scleropages_formosus
ENSMUSG00000060152	Pop5	84	53.472	ENSSMAG00000018868	pop5	85	53.472	Scophthalmus_maximus
ENSMUSG00000060152	Pop5	99	52.695	ENSSDUG00000001282	-	99	52.695	Seriola_dumerili
ENSMUSG00000060152	Pop5	99	52.096	ENSSLDG00000017031	pop5	99	52.096	Seriola_lalandi_dorsalis
ENSMUSG00000060152	Pop5	99	52.096	ENSSLDG00000003801	-	99	52.096	Seriola_lalandi_dorsalis
ENSMUSG00000060152	Pop5	62	90.385	ENSSARG00000005564	POP5	64	90.385	Sorex_araneus
ENSMUSG00000060152	Pop5	84	73.239	ENSSPUG00000015531	POP5	98	66.463	Sphenodon_punctatus
ENSMUSG00000060152	Pop5	84	57.746	ENSSPAG00000015306	pop5	99	54.217	Stegastes_partitus
ENSMUSG00000060152	Pop5	100	88.235	ENSSSCG00000009912	POP5	100	88.235	Sus_scrofa
ENSMUSG00000060152	Pop5	100	65.089	ENSTGUG00000009602	POP5	100	65.089	Taeniopygia_guttata
ENSMUSG00000060152	Pop5	99	50.898	ENSTRUG00000016214	pop5	99	51.515	Takifugu_rubripes
ENSMUSG00000060152	Pop5	99	54.167	ENSTNIG00000011465	pop5	96	56.173	Tetraodon_nigroviridis
ENSMUSG00000060152	Pop5	100	84.615	ENSTBEG00000010131	POP5	100	84.615	Tupaia_belangeri
ENSMUSG00000060152	Pop5	100	87.647	ENSTTRG00000000153	POP5	100	87.647	Tursiops_truncatus
ENSMUSG00000060152	Pop5	96	83.537	ENSUAMG00000015541	POP5	76	83.537	Ursus_americanus
ENSMUSG00000060152	Pop5	100	84.118	ENSUMAG00000006137	POP5	100	84.118	Ursus_maritimus
ENSMUSG00000060152	Pop5	100	86.471	ENSVPAG00000010365	POP5	100	86.471	Vicugna_pacos
ENSMUSG00000060152	Pop5	100	85.882	ENSVVUG00000021154	POP5	100	85.882	Vulpes_vulpes
ENSMUSG00000060152	Pop5	67	64.602	ENSXETG00000031793	POP5	98	64.602	Xenopus_tropicalis
ENSMUSG00000060152	Pop5	84	58.451	ENSXMAG00000003508	-	84	55.215	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000171	ribonuclease MRP activity	11413139.	ISA	Function
GO:0000172	ribonuclease MRP complex	21873635.	IBA	Component
GO:0000172	ribonuclease MRP complex	11413139.	ISA	Component
GO:0000172	ribonuclease MRP complex	-	ISO	Component
GO:0001682	tRNA 5'-leader removal	-	ISO	Process
GO:0004526	ribonuclease P activity	21873635.	IBA	Function
GO:0004526	ribonuclease P activity	11413139.	IDA	Function
GO:0004526	ribonuclease P activity	-	ISO	Function
GO:0004540	ribonuclease activity	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005655	nucleolar ribonuclease P complex	21873635.	IBA	Component
GO:0005655	nucleolar ribonuclease P complex	11413139.	IDA	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0006364	rRNA processing	11413139.	ISA	Process
GO:0008033	tRNA processing	21873635.	IBA	Process
GO:0008033	tRNA processing	11413139.	IDA	Process
GO:0016070	RNA metabolic process	-	IEA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0030681	multimeric ribonuclease P complex	-	ISO	Component