EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000060429 (Gene tree)
Gene ID: 20649
Gene Symbol: Sntb1
Alias: 59-1 DAP|beta1-Syntrophin
Full Name: syntrophin%2C basic 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 270562
Position: chr15: 55636388-55906949
Accession: 101781
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000140574	-	600	-	-	- (aa)	-	-
ENSMUST00000039769	-	4919	XM_006520671	ENSMUSP00000041294	537 (aa)	XP_006520734	Q99L88
ENSMUST00000110200	-	1225	-	ENSMUSP00000105829	276 (aa)	-	Q99L88

Gene Model

Click here to download ENSMUSG00000060429's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000060429's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003779	actin binding	-	IEA	Function
GO:0005198	structural molecule activity	-	IEA	Function
GO:0005515	protein binding	15310750.	IPI	Function
GO:0005516	calmodulin binding	-	IEA	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005886	plasma membrane	-	IEA	Component
GO:0016010	dystrophin-associated glycoprotein complex	21873635.	IBA	Component
GO:0016020	membrane	-	IEA	Component
GO:0030054	cell junction	-	IEA	Component
GO:0030165	PDZ domain binding	-	ISO	Function
GO:0032991	protein-containing complex	18468998.	ISO	Component
GO:0045202	synapse	21873635.	IBA	Component
GO:0045202	synapse	10995443.	IDA	Component