EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000060679 (Gene tree)
Gene ID: 69527
Gene Symbol: Mrps9
Alias: 2310002A08Rik
Full Name: mitochondrial ribosomal protein S9
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 54451 bases
Position: chr1:42851233-42905683
Accession: 1916777
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000056855	Ribosomal_S9	PF00380.19	7.7e-37	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000188174	-	2421	-	-	- (aa)	-	-
ENSMUST00000202358	-	687	-	-	- (aa)	-	-
ENSMUST00000187414	-	1142	-	-	- (aa)	-	-
ENSMUST00000185376	-	2088	-	-	- (aa)	-	-
ENSMUST00000057208	-	1418	-	ENSMUSP00000056855	390 (aa)	-	Q9D7N3
ENSMUST00000201108	-	1009	XM_006496256	ENSMUSP00000143932	129 (aa)	XP_006496319	A0A0J9YU02
ENSMUST00000185523	-	1867	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000060679's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000060679's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000060679	Mrps9	100	77.273	ENSG00000135972	MRPS9	100	77.273	Homo_sapiens
ENSMUSG00000060679	Mrps9	89	62.040	ENSAPOG00000005208	mrps9	93	62.040	Acanthochromis_polyacanthus
ENSMUSG00000060679	Mrps9	100	79.592	ENSAMEG00000013254	MRPS9	100	79.592	Ailuropoda_melanoleuca
ENSMUSG00000060679	Mrps9	88	61.254	ENSACIG00000024089	mrps9	92	61.254	Amphilophus_citrinellus
ENSMUSG00000060679	Mrps9	89	62.921	ENSAOCG00000017749	mrps9	93	62.921	Amphiprion_ocellaris
ENSMUSG00000060679	Mrps9	89	62.921	ENSAPEG00000013413	mrps9	93	62.921	Amphiprion_percula
ENSMUSG00000060679	Mrps9	81	58.696	ENSATEG00000015199	mrps9	90	58.696	Anabas_testudineus
ENSMUSG00000060679	Mrps9	76	68.317	ENSAPLG00000013899	MRPS9	100	68.317	Anas_platyrhynchos
ENSMUSG00000060679	Mrps9	85	67.656	ENSACAG00000011232	MRPS9	92	67.656	Anolis_carolinensis
ENSMUSG00000060679	Mrps9	99	70.960	ENSANAG00000032983	-	99	70.960	Aotus_nancymaae
ENSMUSG00000060679	Mrps9	100	76.263	ENSANAG00000021821	-	100	76.263	Aotus_nancymaae
ENSMUSG00000060679	Mrps9	100	73.737	ENSANAG00000028319	-	100	73.737	Aotus_nancymaae
ENSMUSG00000060679	Mrps9	92	60.822	ENSACLG00000010815	mrps9	96	60.822	Astatotilapia_calliptera
ENSMUSG00000060679	Mrps9	85	64.583	ENSAMXG00000009629	mrps9	88	64.583	Astyanax_mexicanus
ENSMUSG00000060679	Mrps9	100	76.768	ENSBTAG00000006150	MRPS9	100	76.768	Bos_taurus
ENSMUSG00000060679	Mrps9	82	35.632	WBGene00017319	mrps-9	88	35.632	Caenorhabditis_elegans
ENSMUSG00000060679	Mrps9	100	76.000	ENSCJAG00000022933	-	100	76.000	Callithrix_jacchus
ENSMUSG00000060679	Mrps9	100	76.250	ENSCJAG00000008156	-	100	76.250	Callithrix_jacchus
ENSMUSG00000060679	Mrps9	100	77.778	ENSCAFG00000002122	MRPS9	100	77.778	Canis_familiaris
ENSMUSG00000060679	Mrps9	100	77.778	ENSCAFG00020010507	MRPS9	100	77.778	Canis_lupus_dingo
ENSMUSG00000060679	Mrps9	100	77.020	ENSCHIG00000022475	MRPS9	100	77.020	Capra_hircus
ENSMUSG00000060679	Mrps9	65	84.615	ENSTSYG00000010423	MRPS9	100	88.462	Carlito_syrichta
ENSMUSG00000060679	Mrps9	100	73.990	ENSCPOG00000013967	MRPS9	100	73.990	Cavia_porcellus
ENSMUSG00000060679	Mrps9	100	75.253	ENSCCAG00000028813	-	100	75.253	Cebus_capucinus
ENSMUSG00000060679	Mrps9	100	70.992	ENSCCAG00000028196	-	100	70.992	Cebus_capucinus
ENSMUSG00000060679	Mrps9	98	67.352	ENSCCAG00000024066	-	100	67.352	Cebus_capucinus
ENSMUSG00000060679	Mrps9	100	75.758	ENSCATG00000036678	MRPS9	100	75.758	Cercocebus_atys
ENSMUSG00000060679	Mrps9	100	76.010	ENSCLAG00000005209	MRPS9	91	76.010	Chinchilla_lanigera
ENSMUSG00000060679	Mrps9	100	75.505	ENSCSAG00000017079	MRPS9	100	75.505	Chlorocebus_sabaeus
ENSMUSG00000060679	Mrps9	88	81.375	ENSCHOG00000003198	MRPS9	99	81.375	Choloepus_hoffmanni
ENSMUSG00000060679	Mrps9	89	73.864	ENSCPBG00000007214	MRPS9	93	73.864	Chrysemys_picta_bellii
ENSMUSG00000060679	Mrps9	100	76.515	ENSCANG00000035795	MRPS9	100	76.515	Colobus_angolensis_palliatus
ENSMUSG00000060679	Mrps9	100	88.718	ENSCGRG00001012228	Mrps9	100	88.718	Cricetulus_griseus_chok1gshd
ENSMUSG00000060679	Mrps9	100	88.718	ENSCGRG00000007505	Mrps9	100	88.718	Cricetulus_griseus_crigri
ENSMUSG00000060679	Mrps9	98	55.013	ENSCSEG00000003508	mrps9	90	55.013	Cynoglossus_semilaevis
ENSMUSG00000060679	Mrps9	99	57.761	ENSCVAG00000007791	mrps9	99	57.761	Cyprinodon_variegatus
ENSMUSG00000060679	Mrps9	95	58.073	ENSDARG00000061505	mrps9	99	58.073	Danio_rerio
ENSMUSG00000060679	Mrps9	100	72.682	ENSDNOG00000006994	MRPS9	100	72.682	Dasypus_novemcinctus
ENSMUSG00000060679	Mrps9	100	80.051	ENSDORG00000012465	Mrps9	100	80.051	Dipodomys_ordii
ENSMUSG00000060679	Mrps9	82	46.789	FBgn0037529	mRpS9	83	46.789	Drosophila_melanogaster
ENSMUSG00000060679	Mrps9	100	66.332	ENSETEG00000014167	MRPS9	100	66.332	Echinops_telfairi
ENSMUSG00000060679	Mrps9	74	56.552	ENSEBUG00000009642	mrps9	91	56.552	Eptatretus_burgeri
ENSMUSG00000060679	Mrps9	100	76.768	ENSEASG00005017804	MRPS9	100	76.768	Equus_asinus_asinus
ENSMUSG00000060679	Mrps9	100	78.030	ENSECAG00000011157	MRPS9	100	78.030	Equus_caballus
ENSMUSG00000060679	Mrps9	87	68.627	ENSEEUG00000000989	MRPS9	86	68.627	Erinaceus_europaeus
ENSMUSG00000060679	Mrps9	89	64.507	ENSELUG00000006431	mrps9	93	63.873	Esox_lucius
ENSMUSG00000060679	Mrps9	100	76.515	ENSFCAG00000031722	MRPS9	100	76.515	Felis_catus
ENSMUSG00000060679	Mrps9	88	68.678	ENSFALG00000003647	MRPS9	99	68.678	Ficedula_albicollis
ENSMUSG00000060679	Mrps9	100	76.768	ENSFDAG00000004645	MRPS9	100	76.768	Fukomys_damarensis
ENSMUSG00000060679	Mrps9	89	62.890	ENSFHEG00000008856	mrps9	99	62.963	Fundulus_heteroclitus
ENSMUSG00000060679	Mrps9	99	65.473	ENSGALG00000016794	MRPS9	99	57.289	Gallus_gallus
ENSMUSG00000060679	Mrps9	93	60.108	ENSGAFG00000009850	mrps9	98	60.108	Gambusia_affinis
ENSMUSG00000060679	Mrps9	88	73.926	ENSGAGG00000003622	MRPS9	99	73.926	Gopherus_agassizii
ENSMUSG00000060679	Mrps9	100	77.273	ENSGGOG00000007751	MRPS9	100	77.273	Gorilla_gorilla
ENSMUSG00000060679	Mrps9	92	60.548	ENSHBUG00000005067	mrps9	96	60.548	Haplochromis_burtoni
ENSMUSG00000060679	Mrps9	100	77.020	ENSHGLG00000011532	MRPS9	100	77.020	Heterocephalus_glaber_female
ENSMUSG00000060679	Mrps9	100	77.273	ENSHGLG00100014404	MRPS9	100	77.273	Heterocephalus_glaber_male
ENSMUSG00000060679	Mrps9	100	57.071	ENSHCOG00000003338	mrps9	100	57.071	Hippocampus_comes
ENSMUSG00000060679	Mrps9	88	62.393	ENSIPUG00000012385	MRPS9	91	62.393	Ictalurus_punctatus
ENSMUSG00000060679	Mrps9	100	81.795	ENSSTOG00000016370	MRPS9	100	81.795	Ictidomys_tridecemlineatus
ENSMUSG00000060679	Mrps9	100	78.974	ENSJJAG00000010770	-	100	78.974	Jaculus_jaculus
ENSMUSG00000060679	Mrps9	100	75.641	ENSJJAG00000001151	-	100	75.641	Jaculus_jaculus
ENSMUSG00000060679	Mrps9	89	60.057	ENSKMAG00000003005	mrps9	93	60.057	Kryptolebias_marmoratus
ENSMUSG00000060679	Mrps9	98	57.576	ENSLBEG00000006954	mrps9	89	57.576	Labrus_bergylta
ENSMUSG00000060679	Mrps9	55	66.512	ENSLACG00000013746	MRPS9	93	65.899	Latimeria_chalumnae
ENSMUSG00000060679	Mrps9	88	70.085	ENSLOCG00000008722	mrps9	90	70.085	Lepisosteus_oculatus
ENSMUSG00000060679	Mrps9	100	74.242	ENSLAFG00000008097	MRPS9	100	74.242	Loxodonta_africana
ENSMUSG00000060679	Mrps9	100	76.010	ENSMFAG00000039793	MRPS9	100	76.010	Macaca_fascicularis
ENSMUSG00000060679	Mrps9	100	76.010	ENSMMUG00000019682	MRPS9	100	76.010	Macaca_mulatta
ENSMUSG00000060679	Mrps9	100	75.758	ENSMNEG00000034038	MRPS9	100	75.758	Macaca_nemestrina
ENSMUSG00000060679	Mrps9	100	76.263	ENSMLEG00000042789	MRPS9	100	76.263	Mandrillus_leucophaeus
ENSMUSG00000060679	Mrps9	100	58.911	ENSMAMG00000022287	mrps9	100	58.911	Mastacembelus_armatus
ENSMUSG00000060679	Mrps9	92	60.548	ENSMZEG00005015264	mrps9	96	60.548	Maylandia_zebra
ENSMUSG00000060679	Mrps9	88	69.540	ENSMGAG00000014818	MRPS9	99	69.540	Meleagris_gallopavo
ENSMUSG00000060679	Mrps9	100	87.949	ENSMAUG00000014517	Mrps9	100	87.949	Mesocricetus_auratus
ENSMUSG00000060679	Mrps9	100	79.093	ENSMICG00000000223	MRPS9	100	79.093	Microcebus_murinus
ENSMUSG00000060679	Mrps9	100	87.692	ENSMOCG00000008753	Mrps9	100	87.692	Microtus_ochrogaster
ENSMUSG00000060679	Mrps9	83	60.923	ENSMMOG00000021068	mrps9	99	58.671	Mola_mola
ENSMUSG00000060679	Mrps9	100	71.465	ENSMODG00000002479	MRPS9	100	71.465	Monodelphis_domestica
ENSMUSG00000060679	Mrps9	99	58.056	ENSMALG00000019855	mrps9	99	58.056	Monopterus_albus
ENSMUSG00000060679	Mrps9	100	98.718	MGP_CAROLIEiJ_G0014088	Mrps9	98	98.718	Mus_caroli
ENSMUSG00000060679	Mrps9	100	94.615	MGP_PahariEiJ_G0027333	Mrps9	100	94.615	Mus_pahari
ENSMUSG00000060679	Mrps9	100	98.974	MGP_SPRETEiJ_G0014892	Mrps9	100	98.974	Mus_spretus
ENSMUSG00000060679	Mrps9	93	77.384	ENSMPUG00000010853	MRPS9	92	77.384	Mustela_putorius_furo
ENSMUSG00000060679	Mrps9	100	77.020	ENSMLUG00000001715	MRPS9	100	77.020	Myotis_lucifugus
ENSMUSG00000060679	Mrps9	100	83.590	ENSNGAG00000020814	Mrps9	100	83.590	Nannospalax_galili
ENSMUSG00000060679	Mrps9	92	52.222	ENSNBRG00000016845	mrps9	95	52.222	Neolamprologus_brichardi
ENSMUSG00000060679	Mrps9	100	76.010	ENSNLEG00000032880	MRPS9	100	76.010	Nomascus_leucogenys
ENSMUSG00000060679	Mrps9	88	59.483	ENSMEUG00000013188	MRPS9	99	59.483	Notamacropus_eugenii
ENSMUSG00000060679	Mrps9	100	66.162	ENSOPRG00000003758	-	100	66.162	Ochotona_princeps
ENSMUSG00000060679	Mrps9	100	76.154	ENSODEG00000008818	MRPS9	100	76.154	Octodon_degus
ENSMUSG00000060679	Mrps9	100	57.323	ENSONIG00000013457	mrps9	100	57.323	Oreochromis_niloticus
ENSMUSG00000060679	Mrps9	76	74.419	ENSOANG00000012373	MRPS9	99	74.419	Ornithorhynchus_anatinus
ENSMUSG00000060679	Mrps9	100	77.778	ENSOCUG00000015017	MRPS9	100	77.778	Oryctolagus_cuniculus
ENSMUSG00000060679	Mrps9	88	61.823	ENSORLG00000001896	mrps9	82	61.823	Oryzias_latipes
ENSMUSG00000060679	Mrps9	88	61.538	ENSORLG00020004081	mrps9	91	61.538	Oryzias_latipes_hni
ENSMUSG00000060679	Mrps9	88	61.823	ENSORLG00015006913	mrps9	91	61.823	Oryzias_latipes_hsok
ENSMUSG00000060679	Mrps9	88	62.393	ENSOMEG00000015064	mrps9	91	62.393	Oryzias_melastigma
ENSMUSG00000060679	Mrps9	100	78.283	ENSOGAG00000007255	MRPS9	100	78.283	Otolemur_garnettii
ENSMUSG00000060679	Mrps9	100	77.020	ENSOARG00000013000	MRPS9	100	77.020	Ovis_aries
ENSMUSG00000060679	Mrps9	100	77.020	ENSPPAG00000037429	MRPS9	100	77.020	Pan_paniscus
ENSMUSG00000060679	Mrps9	100	76.768	ENSPPRG00000009311	MRPS9	100	76.768	Panthera_pardus
ENSMUSG00000060679	Mrps9	100	76.768	ENSPTIG00000019423	MRPS9	100	76.768	Panthera_tigris_altaica
ENSMUSG00000060679	Mrps9	100	77.273	ENSPTRG00000012310	MRPS9	100	77.273	Pan_troglodytes
ENSMUSG00000060679	Mrps9	100	64.646	ENSPANG00000012691	MRPS9	100	64.646	Papio_anubis
ENSMUSG00000060679	Mrps9	94	61.640	ENSPKIG00000010542	mrps9	96	61.640	Paramormyrops_kingsleyae
ENSMUSG00000060679	Mrps9	88	71.182	ENSPSIG00000015761	MRPS9	99	71.182	Pelodiscus_sinensis
ENSMUSG00000060679	Mrps9	85	62.242	ENSPMGG00000015551	mrps9	92	60.807	Periophthalmus_magnuspinnatus
ENSMUSG00000060679	Mrps9	100	84.910	ENSPEMG00000020068	Mrps9	100	84.910	Peromyscus_maniculatus_bairdii
ENSMUSG00000060679	Mrps9	100	67.848	ENSPCIG00000016698	MRPS9	100	67.848	Phascolarctos_cinereus
ENSMUSG00000060679	Mrps9	99	57.033	ENSPFOG00000013721	mrps9	99	57.033	Poecilia_formosa
ENSMUSG00000060679	Mrps9	91	60.000	ENSPLAG00000008098	mrps9	95	61.739	Poecilia_latipinna
ENSMUSG00000060679	Mrps9	99	57.033	ENSPMEG00000021477	mrps9	99	57.033	Poecilia_mexicana
ENSMUSG00000060679	Mrps9	88	61.538	ENSPREG00000016254	mrps9	96	61.538	Poecilia_reticulata
ENSMUSG00000060679	Mrps9	100	76.263	ENSPPYG00000012119	MRPS9	100	76.263	Pongo_abelii
ENSMUSG00000060679	Mrps9	100	70.886	ENSPCAG00000008824	MRPS9	100	70.886	Procavia_capensis
ENSMUSG00000060679	Mrps9	100	78.974	ENSPCOG00000018743	MRPS9	100	78.974	Propithecus_coquereli
ENSMUSG00000060679	Mrps9	100	79.135	ENSPVAG00000000927	MRPS9	100	79.135	Pteropus_vampyrus
ENSMUSG00000060679	Mrps9	92	61.096	ENSPNYG00000008697	mrps9	96	61.096	Pundamilia_nyererei
ENSMUSG00000060679	Mrps9	95	61.053	ENSPNAG00000020186	mrps9	99	61.053	Pygocentrus_nattereri
ENSMUSG00000060679	Mrps9	100	91.538	ENSRNOG00000016201	Mrps9	100	91.538	Rattus_norvegicus
ENSMUSG00000060679	Mrps9	100	76.768	ENSRBIG00000025807	MRPS9	100	76.768	Rhinopithecus_bieti
ENSMUSG00000060679	Mrps9	100	76.515	ENSRROG00000044430	MRPS9	100	76.515	Rhinopithecus_roxellana
ENSMUSG00000060679	Mrps9	100	76.515	ENSSBOG00000035994	MRPS9	100	76.515	Saimiri_boliviensis_boliviensis
ENSMUSG00000060679	Mrps9	100	70.707	ENSSHAG00000018119	MRPS9	100	78.261	Sarcophilus_harrisii
ENSMUSG00000060679	Mrps9	88	63.818	ENSSFOG00015023159	mrps9	96	63.818	Scleropages_formosus
ENSMUSG00000060679	Mrps9	89	60.563	ENSSMAG00000010712	mrps9	92	60.563	Scophthalmus_maximus
ENSMUSG00000060679	Mrps9	89	60.563	ENSSDUG00000011236	mrps9	98	60.969	Seriola_dumerili
ENSMUSG00000060679	Mrps9	89	60.000	ENSSLDG00000005169	mrps9	92	60.000	Seriola_lalandi_dorsalis
ENSMUSG00000060679	Mrps9	100	63.889	ENSSARG00000011331	MRPS9	100	63.889	Sorex_araneus
ENSMUSG00000060679	Mrps9	84	70.695	ENSSPUG00000005894	MRPS9	100	70.695	Sphenodon_punctatus
ENSMUSG00000060679	Mrps9	88	59.659	ENSSPAG00000005960	mrps9	97	59.659	Stegastes_partitus
ENSMUSG00000060679	Mrps9	100	76.574	ENSSSCG00000028020	MRPS9	100	76.574	Sus_scrofa
ENSMUSG00000060679	Mrps9	88	70.402	ENSTGUG00000009773	MRPS9	99	70.402	Taeniopygia_guttata
ENSMUSG00000060679	Mrps9	100	56.927	ENSTRUG00000010406	mrps9	100	56.927	Takifugu_rubripes
ENSMUSG00000060679	Mrps9	83	63.415	ENSTNIG00000003463	mrps9	100	61.404	Tetraodon_nigroviridis
ENSMUSG00000060679	Mrps9	88	76.504	ENSTBEG00000001933	MRPS9	99	76.504	Tupaia_belangeri
ENSMUSG00000060679	Mrps9	100	72.222	ENSTTRG00000014572	MRPS9	100	72.222	Tursiops_truncatus
ENSMUSG00000060679	Mrps9	100	79.540	ENSUAMG00000012215	MRPS9	100	81.429	Ursus_americanus
ENSMUSG00000060679	Mrps9	100	78.030	ENSUMAG00000020795	MRPS9	100	78.030	Ursus_maritimus
ENSMUSG00000060679	Mrps9	100	77.020	ENSVVUG00000012519	MRPS9	100	77.020	Vulpes_vulpes
ENSMUSG00000060679	Mrps9	100	63.728	ENSXETG00000002583	mrps9	100	63.728	Xenopus_tropicalis
ENSMUSG00000060679	Mrps9	88	59.887	ENSXCOG00000020462	mrps9	98	59.887	Xiphophorus_couchianus
ENSMUSG00000060679	Mrps9	99	57.801	ENSXMAG00000007974	mrps9	98	59.887	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0005730	nucleolus	-	ISO	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005763	mitochondrial small ribosomal subunit	21873635.	IBA	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process