EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000060862 (Gene tree)
Gene ID: 230848
Gene Symbol: Zbtb40
Alias: -
Full Name: zinc finger and BTB domain containing 40
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 69070 bases
Position: chr4:136979732-137048801
Accession: 2682254
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000061899	zf-C2H2	PF00096.26	7.5e-34	1	4
ENSMUSP00000061899	zf-C2H2	PF00096.26	7.5e-34	2	4
ENSMUSP00000061899	zf-C2H2	PF00096.26	7.5e-34	3	4
ENSMUSP00000061899	zf-C2H2	PF00096.26	7.5e-34	4	4
ENSMUSP00000151856	zf-C2H2	PF00096.26	9.9e-33	1	4
ENSMUSP00000151856	zf-C2H2	PF00096.26	9.9e-33	2	4
ENSMUSP00000151856	zf-C2H2	PF00096.26	9.9e-33	3	4
ENSMUSP00000151856	zf-C2H2	PF00096.26	9.9e-33	4	4
ENSMUSP00000151856	zf-met	PF12874.7	9.8e-06	1	1
ENSMUSP00000061899	zf-met	PF12874.7	4.4e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000145505	-	4446	-	-	- (aa)	-	-
ENSMUST00000049583	-	7192	XM_006538763	ENSMUSP00000061899	1258 (aa)	XP_006538826	Q6PCS8
ENSMUST00000218160	-	806	-	ENSMUSP00000151856	269 (aa)	-	A0A1W2P800

Gene Model

Click here to download ENSMUSG00000060862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000060862's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000060862	Zbtb40	99	96.269	ENSG00000184677	ZBTB40	100	77.972	Homo_sapiens
ENSMUSG00000060862	Zbtb40	99	95.539	ENSAMEG00000014635	ZBTB40	100	76.359	Ailuropoda_melanoleuca
ENSMUSG00000060862	Zbtb40	99	96.642	ENSANAG00000010550	ZBTB40	100	77.778	Aotus_nancymaae
ENSMUSG00000060862	Zbtb40	99	97.761	ENSBTAG00000016448	ZBTB40	100	74.389	Bos_taurus
ENSMUSG00000060862	Zbtb40	99	96.642	ENSCJAG00000005869	ZBTB40	100	77.451	Callithrix_jacchus
ENSMUSG00000060862	Zbtb40	99	95.522	ENSCAFG00000014644	ZBTB40	100	75.452	Canis_familiaris
ENSMUSG00000060862	Zbtb40	99	95.522	ENSCAFG00020019562	ZBTB40	100	76.144	Canis_lupus_dingo
ENSMUSG00000060862	Zbtb40	99	96.269	ENSCHIG00000007943	ZBTB40	100	74.019	Capra_hircus
ENSMUSG00000060862	Zbtb40	99	95.149	ENSTSYG00000000979	ZBTB40	100	75.926	Carlito_syrichta
ENSMUSG00000060862	Zbtb40	99	87.778	ENSCAPG00000009177	ZBTB40	100	74.973	Cavia_aperea
ENSMUSG00000060862	Zbtb40	99	96.269	ENSCPOG00000012844	ZBTB40	100	75.197	Cavia_porcellus
ENSMUSG00000060862	Zbtb40	99	96.642	ENSCCAG00000021093	ZBTB40	100	77.124	Cebus_capucinus
ENSMUSG00000060862	Zbtb40	99	96.642	ENSCATG00000031739	ZBTB40	100	77.863	Cercocebus_atys
ENSMUSG00000060862	Zbtb40	99	95.896	ENSCLAG00000015032	ZBTB40	100	79.162	Chinchilla_lanigera
ENSMUSG00000060862	Zbtb40	99	96.642	ENSCSAG00000000911	ZBTB40	100	77.699	Chlorocebus_sabaeus
ENSMUSG00000060862	Zbtb40	99	96.667	ENSCHOG00000011197	ZBTB40	93	94.253	Choloepus_hoffmanni
ENSMUSG00000060862	Zbtb40	99	96.642	ENSCANG00000038636	ZBTB40	100	77.863	Colobus_angolensis_palliatus
ENSMUSG00000060862	Zbtb40	99	94.403	ENSCGRG00001016016	Zbtb40	100	84.102	Cricetulus_griseus_chok1gshd
ENSMUSG00000060862	Zbtb40	99	94.403	ENSCGRG00000008459	Zbtb40	100	84.261	Cricetulus_griseus_crigri
ENSMUSG00000060862	Zbtb40	99	54.393	ENSDARG00000091762	zbtb40	96	55.970	Danio_rerio
ENSMUSG00000060862	Zbtb40	99	96.642	ENSDNOG00000006200	ZBTB40	100	76.693	Dasypus_novemcinctus
ENSMUSG00000060862	Zbtb40	99	95.149	ENSDORG00000016495	Zbtb40	100	77.778	Dipodomys_ordii
ENSMUSG00000060862	Zbtb40	99	94.030	ENSEASG00005007270	ZBTB40	100	75.411	Equus_asinus_asinus
ENSMUSG00000060862	Zbtb40	99	94.030	ENSECAG00000016319	ZBTB40	99	74.834	Equus_caballus
ENSMUSG00000060862	Zbtb40	99	92.537	ENSEEUG00000001708	ZBTB40	100	71.307	Erinaceus_europaeus
ENSMUSG00000060862	Zbtb40	99	96.642	ENSFCAG00000028182	ZBTB40	100	77.015	Felis_catus
ENSMUSG00000060862	Zbtb40	99	95.896	ENSFDAG00000003410	ZBTB40	96	84.274	Fukomys_damarensis
ENSMUSG00000060862	Zbtb40	99	96.642	ENSGGOG00000010010	ZBTB40	100	78.081	Gorilla_gorilla
ENSMUSG00000060862	Zbtb40	99	95.896	ENSHGLG00000016950	ZBTB40	95	67.185	Heterocephalus_glaber_female
ENSMUSG00000060862	Zbtb40	99	95.896	ENSHGLG00100008314	ZBTB40	95	67.185	Heterocephalus_glaber_male
ENSMUSG00000060862	Zbtb40	99	95.896	ENSSTOG00000009598	ZBTB40	100	77.008	Ictidomys_tridecemlineatus
ENSMUSG00000060862	Zbtb40	99	94.776	ENSJJAG00000018013	Zbtb40	100	78.333	Jaculus_jaculus
ENSMUSG00000060862	Zbtb40	99	95.896	ENSLAFG00000006483	ZBTB40	100	78.113	Loxodonta_africana
ENSMUSG00000060862	Zbtb40	99	96.642	ENSMFAG00000043032	ZBTB40	100	77.644	Macaca_fascicularis
ENSMUSG00000060862	Zbtb40	99	96.642	ENSMMUG00000018618	ZBTB40	100	77.644	Macaca_mulatta
ENSMUSG00000060862	Zbtb40	99	96.642	ENSMNEG00000032628	ZBTB40	100	77.644	Macaca_nemestrina
ENSMUSG00000060862	Zbtb40	99	96.642	ENSMLEG00000027910	ZBTB40	100	77.754	Mandrillus_leucophaeus
ENSMUSG00000060862	Zbtb40	99	95.167	ENSMAUG00000010466	Zbtb40	100	84.181	Mesocricetus_auratus
ENSMUSG00000060862	Zbtb40	99	97.015	ENSMICG00000007464	ZBTB40	100	80.974	Microcebus_murinus
ENSMUSG00000060862	Zbtb40	99	95.522	ENSMOCG00000013259	Zbtb40	100	86.497	Microtus_ochrogaster
ENSMUSG00000060862	Zbtb40	99	100.000	MGP_CAROLIEiJ_G0026672	Zbtb40	100	97.774	Mus_caroli
ENSMUSG00000060862	Zbtb40	99	98.507	MGP_PahariEiJ_G0029005	Zbtb40	100	95.310	Mus_pahari
ENSMUSG00000060862	Zbtb40	100	99.046	MGP_SPRETEiJ_G0027652	Zbtb40	100	99.046	Mus_spretus
ENSMUSG00000060862	Zbtb40	99	95.896	ENSMPUG00000015961	ZBTB40	100	74.724	Mustela_putorius_furo
ENSMUSG00000060862	Zbtb40	99	95.522	ENSNGAG00000019354	Zbtb40	100	80.556	Nannospalax_galili
ENSMUSG00000060862	Zbtb40	86	42.991	ENSNBRG00000021247	-	84	53.797	Neolamprologus_brichardi
ENSMUSG00000060862	Zbtb40	99	96.642	ENSNLEG00000008268	ZBTB40	100	77.644	Nomascus_leucogenys
ENSMUSG00000060862	Zbtb40	99	94.030	ENSOPRG00000003103	ZBTB40	95	77.189	Ochotona_princeps
ENSMUSG00000060862	Zbtb40	99	93.502	ENSOGAG00000004797	ZBTB40	100	78.740	Otolemur_garnettii
ENSMUSG00000060862	Zbtb40	99	97.388	ENSOARG00000008054	ZBTB40	100	74.254	Ovis_aries
ENSMUSG00000060862	Zbtb40	99	96.642	ENSPPAG00000034112	ZBTB40	100	77.754	Pan_paniscus
ENSMUSG00000060862	Zbtb40	99	96.642	ENSPPRG00000021468	ZBTB40	100	76.688	Panthera_pardus
ENSMUSG00000060862	Zbtb40	99	96.642	ENSPTIG00000010874	ZBTB40	100	76.580	Panthera_tigris_altaica
ENSMUSG00000060862	Zbtb40	99	96.642	ENSPTRG00000000315	ZBTB40	100	77.754	Pan_troglodytes
ENSMUSG00000060862	Zbtb40	99	96.642	ENSPANG00000018749	ZBTB40	100	80.068	Papio_anubis
ENSMUSG00000060862	Zbtb40	99	95.911	ENSPEMG00000009389	Zbtb40	100	85.703	Peromyscus_maniculatus_bairdii
ENSMUSG00000060862	Zbtb40	99	86.940	ENSPCIG00000026425	ZBTB40	100	64.392	Phascolarctos_cinereus
ENSMUSG00000060862	Zbtb40	99	96.642	ENSPPYG00000001752	ZBTB40	100	77.463	Pongo_abelii
ENSMUSG00000060862	Zbtb40	99	97.015	ENSPCOG00000006905	ZBTB40	93	95.442	Propithecus_coquereli
ENSMUSG00000060862	Zbtb40	99	97.388	ENSRNOG00000022039	Zbtb40	100	90.223	Rattus_norvegicus
ENSMUSG00000060862	Zbtb40	99	96.642	ENSRBIG00000034608	ZBTB40	100	77.863	Rhinopithecus_bieti
ENSMUSG00000060862	Zbtb40	99	96.642	ENSRROG00000034514	ZBTB40	100	77.754	Rhinopithecus_roxellana
ENSMUSG00000060862	Zbtb40	99	96.269	ENSSBOG00000027235	ZBTB40	100	77.015	Saimiri_boliviensis_boliviensis
ENSMUSG00000060862	Zbtb40	99	95.896	ENSUAMG00000020372	ZBTB40	100	76.070	Ursus_americanus
ENSMUSG00000060862	Zbtb40	99	95.896	ENSUMAG00000013539	ZBTB40	100	76.466	Ursus_maritimus
ENSMUSG00000060862	Zbtb40	99	95.522	ENSVVUG00000025752	ZBTB40	100	76.362	Vulpes_vulpes
ENSMUSG00000060862	Zbtb40	98	32.386	ENSXCOG00000010422	-	78	62.393	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0006974	cellular response to DNA damage stimulus	21873635.	IBA	Process
GO:0006974	cellular response to DNA damage stimulus	-	ISO	Process