EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000060904 (Gene tree)
Gene ID: 104303
Gene Symbol: Arl1
Alias: 2310008D22Rik
Full Name: ADP-ribosylation factor-like 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 13237 bases
Position: chr10:88730858-88744094
Accession: 99436
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000079246	MMR_HSR1	PF01926.23	7.8e-05	1	1
ENSMUSP00000111942	MMR_HSR1	PF01926.23	0.00015	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000116234	-	2080	-	ENSMUSP00000111942	181 (aa)	-	P61211
ENSMUST00000080379	-	622	-	ENSMUSP00000079246	138 (aa)	-	F8WIB1
ENSMUST00000170137	-	575	-	ENSMUSP00000127889	52 (aa)	-	E9Q006

Gene Model

Click here to download ENSMUSG00000060904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000060904's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000060904	Arl1	100	63.043	ENSMUSG00000020440	Arf5	92	59.394
ENSMUSG00000060904	Arl1	98	33.862	ENSMUSG00000038671	Arfrp1	79	41.837
ENSMUSG00000060904	Arl1	99	48.175	ENSMUSG00000038352	Arl5c	89	45.283
ENSMUSG00000060904	Arl1	99	54.015	ENSMUSG00000017418	Arl5b	96	50.000
ENSMUSG00000060904	Arl1	99	40.714	ENSMUSG00000098207	Arl14	88	39.881
ENSMUSG00000060904	Arl1	98	33.824	ENSMUSG00000026426	Arl8a	89	32.530
ENSMUSG00000060904	Arl1	100	61.594	ENSMUSG00000051853	Arf3	92	58.434
ENSMUSG00000060904	Arl1	100	60.870	ENSMUSG00000062421	Arf2	92	57.831
ENSMUSG00000060904	Arl1	95	44.853	ENSMUSG00000049866	Arl4c	90	40.698
ENSMUSG00000060904	Arl1	98	33.088	ENSMUSG00000030105	Arl8b	89	31.928
ENSMUSG00000060904	Arl1	82	32.000	ENSMUSG00000027519	Rab22a	61	33.071
ENSMUSG00000060904	Arl1	100	50.000	ENSMUSG00000025035	Arl3	91	45.783
ENSMUSG00000060904	Arl1	99	38.406	ENSMUSG00000043157	Arl11	94	40.000
ENSMUSG00000060904	Arl1	79	36.036	ENSMUSG00000025870	Arl10	53	36.036
ENSMUSG00000060904	Arl1	100	45.652	ENSMUSG00000024944	Arl2	90	44.242
ENSMUSG00000060904	Arl1	83	30.579	ENSMUSG00000021062	Rab15	56	30.579
ENSMUSG00000060904	Arl1	99	53.285	ENSMUSG00000036093	Arl5a	92	50.303
ENSMUSG00000060904	Arl1	92	30.709	ENSMUSG00000020088	Sar1a	94	34.831
ENSMUSG00000060904	Arl1	100	35.915	ENSMUSG00000022722	Arl6	90	35.714
ENSMUSG00000060904	Arl1	100	61.594	ENSMUSG00000048076	Arf1	92	57.831
ENSMUSG00000060904	Arl1	95	41.912	ENSMUSG00000047446	Arl4a	86	38.953
ENSMUSG00000060904	Arl1	95	37.500	ENSMUSG00000034936	Arl4d	85	35.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000060904	Arl1	100	98.895	ENSG00000120805	ARL1	100	98.895	Homo_sapiens
ENSMUSG00000060904	Arl1	100	95.652	ENSAPOG00000002469	arl1	95	94.611	Acanthochromis_polyacanthus
ENSMUSG00000060904	Arl1	100	99.275	ENSAMEG00000016452	ARL1	99	98.889	Ailuropoda_melanoleuca
ENSMUSG00000060904	Arl1	100	93.478	ENSACIG00000007953	arl1	93	92.814	Amphilophus_citrinellus
ENSMUSG00000060904	Arl1	100	95.652	ENSAOCG00000013008	arl1	92	94.611	Amphiprion_ocellaris
ENSMUSG00000060904	Arl1	100	95.652	ENSAPEG00000013187	arl1	95	94.611	Amphiprion_percula
ENSMUSG00000060904	Arl1	100	94.928	ENSATEG00000005559	arl1	90	94.611	Anabas_testudineus
ENSMUSG00000060904	Arl1	100	97.826	ENSAPLG00000016092	ARL1	100	96.685	Anas_platyrhynchos
ENSMUSG00000060904	Arl1	100	98.551	ENSACAG00000011602	ARL1	100	98.343	Anolis_carolinensis
ENSMUSG00000060904	Arl1	100	99.448	ENSANAG00000023491	ARL1	100	99.448	Aotus_nancymaae
ENSMUSG00000060904	Arl1	100	95.652	ENSACLG00000008188	arl1	92	95.210	Astatotilapia_calliptera
ENSMUSG00000060904	Arl1	100	95.652	ENSAMXG00000021056	arl1	96	95.808	Astyanax_mexicanus
ENSMUSG00000060904	Arl1	100	99.448	ENSBTAG00000011883	ARL1	100	99.448	Bos_taurus
ENSMUSG00000060904	Arl1	100	76.812	WBGene00000187	arl-1	93	73.653	Caenorhabditis_elegans
ENSMUSG00000060904	Arl1	100	99.448	ENSCJAG00000001966	ARL1	100	99.448	Callithrix_jacchus
ENSMUSG00000060904	Arl1	100	99.448	ENSCAFG00000006992	ARL1	100	99.448	Canis_familiaris
ENSMUSG00000060904	Arl1	100	99.448	ENSCAFG00020024333	ARL1	100	99.448	Canis_lupus_dingo
ENSMUSG00000060904	Arl1	100	99.275	ENSCHIG00000024524	ARL1	100	99.412	Capra_hircus
ENSMUSG00000060904	Arl1	100	99.275	ENSTSYG00000013257	-	100	99.441	Carlito_syrichta
ENSMUSG00000060904	Arl1	100	99.275	ENSCAPG00000001010	ARL1	100	99.275	Cavia_aperea
ENSMUSG00000060904	Arl1	100	99.448	ENSCPOG00000026014	ARL1	100	99.448	Cavia_porcellus
ENSMUSG00000060904	Arl1	100	99.448	ENSCCAG00000025938	ARL1	100	99.448	Cebus_capucinus
ENSMUSG00000060904	Arl1	100	98.551	ENSCLAG00000008180	ARL1	100	98.343	Chinchilla_lanigera
ENSMUSG00000060904	Arl1	100	98.895	ENSCSAG00000003368	ARL1	100	98.895	Chlorocebus_sabaeus
ENSMUSG00000060904	Arl1	100	97.101	ENSCPBG00000004906	ARL1	100	96.133	Chrysemys_picta_bellii
ENSMUSG00000060904	Arl1	99	43.885	ENSCING00000004577	-	92	44.375	Ciona_intestinalis
ENSMUSG00000060904	Arl1	99	82.482	ENSCING00000019794	-	92	78.182	Ciona_intestinalis
ENSMUSG00000060904	Arl1	99	82.482	ENSCSAVG00000007620	-	90	77.576	Ciona_savignyi
ENSMUSG00000060904	Arl1	100	98.343	ENSCANG00000033548	ARL1	100	98.343	Colobus_angolensis_palliatus
ENSMUSG00000060904	Arl1	100	100.000	ENSCGRG00001010446	Arl1	100	100.000	Cricetulus_griseus_chok1gshd
ENSMUSG00000060904	Arl1	100	99.275	ENSCGRG00000009856	Arl1	90	98.895	Cricetulus_griseus_crigri
ENSMUSG00000060904	Arl1	100	95.652	ENSCVAG00000001731	arl1	92	94.611	Cyprinodon_variegatus
ENSMUSG00000060904	Arl1	100	96.377	ENSDARG00000101680	arl1	92	96.835	Danio_rerio
ENSMUSG00000060904	Arl1	100	99.275	ENSDORG00000014770	Arl1	95	98.895	Dipodomys_ordii
ENSMUSG00000060904	Arl1	100	83.333	FBgn0000115	Arl1	93	81.437	Drosophila_melanogaster
ENSMUSG00000060904	Arl1	100	97.826	ENSETEG00000020310	ARL1	100	96.629	Echinops_telfairi
ENSMUSG00000060904	Arl1	100	99.448	ENSEASG00005020057	ARL1	100	99.448	Equus_asinus_asinus
ENSMUSG00000060904	Arl1	100	99.448	ENSECAG00000000372	ARL1	100	99.448	Equus_caballus
ENSMUSG00000060904	Arl1	100	95.652	ENSELUG00000018440	arl1	92	95.808	Esox_lucius
ENSMUSG00000060904	Arl1	100	94.203	ENSELUG00000001287	-	92	94.012	Esox_lucius
ENSMUSG00000060904	Arl1	100	99.448	ENSFCAG00000030871	ARL1	100	99.448	Felis_catus
ENSMUSG00000060904	Arl1	100	97.826	ENSFALG00000011156	ARL1	100	97.238	Ficedula_albicollis
ENSMUSG00000060904	Arl1	100	99.275	ENSFDAG00000016393	ARL1	100	98.895	Fukomys_damarensis
ENSMUSG00000060904	Arl1	100	95.652	ENSFHEG00000004171	arl1	88	95.210	Fundulus_heteroclitus
ENSMUSG00000060904	Arl1	100	94.928	ENSGMOG00000006859	arl1	92	95.210	Gadus_morhua
ENSMUSG00000060904	Arl1	100	97.826	ENSGALG00000011651	ARL1	100	97.238	Gallus_gallus
ENSMUSG00000060904	Arl1	100	95.652	ENSGAFG00000006973	arl1	95	96.203	Gambusia_affinis
ENSMUSG00000060904	Arl1	100	93.478	ENSGACG00000019098	arl1	92	94.611	Gasterosteus_aculeatus
ENSMUSG00000060904	Arl1	100	98.895	ENSGGOG00000010788	ARL1	100	98.895	Gorilla_gorilla
ENSMUSG00000060904	Arl1	100	95.652	ENSHBUG00000010636	arl1	92	95.210	Haplochromis_burtoni
ENSMUSG00000060904	Arl1	100	100.000	ENSHGLG00000004909	ARL1	100	100.000	Heterocephalus_glaber_female
ENSMUSG00000060904	Arl1	100	100.000	ENSHGLG00100001832	ARL1	100	99.448	Heterocephalus_glaber_male
ENSMUSG00000060904	Arl1	100	96.377	ENSHCOG00000005566	arl1	92	95.808	Hippocampus_comes
ENSMUSG00000060904	Arl1	100	94.928	ENSIPUG00000013834	arl1	90	95.210	Ictalurus_punctatus
ENSMUSG00000060904	Arl1	100	99.448	ENSSTOG00000016022	ARL1	100	99.448	Ictidomys_tridecemlineatus
ENSMUSG00000060904	Arl1	100	87.681	ENSJJAG00000000452	-	92	89.820	Jaculus_jaculus
ENSMUSG00000060904	Arl1	100	96.377	ENSKMAG00000005931	arl1	84	96.774	Kryptolebias_marmoratus
ENSMUSG00000060904	Arl1	100	94.203	ENSLBEG00000000991	arl1	95	92.814	Labrus_bergylta
ENSMUSG00000060904	Arl1	100	99.448	ENSLAFG00000026143	ARL1	95	99.448	Loxodonta_africana
ENSMUSG00000060904	Arl1	100	98.895	ENSMFAG00000035725	ARL1	100	98.895	Macaca_fascicularis
ENSMUSG00000060904	Arl1	100	98.551	ENSMMUG00000031610	ARL1	100	98.343	Macaca_mulatta
ENSMUSG00000060904	Arl1	100	98.895	ENSMNEG00000007067	ARL1	100	98.895	Macaca_nemestrina
ENSMUSG00000060904	Arl1	100	98.551	ENSMLEG00000036143	ARL1	100	98.780	Mandrillus_leucophaeus
ENSMUSG00000060904	Arl1	100	93.478	ENSMAMG00000001968	arl1	93	92.814	Mastacembelus_armatus
ENSMUSG00000060904	Arl1	100	95.652	ENSMZEG00005018136	arl1	92	95.210	Maylandia_zebra
ENSMUSG00000060904	Arl1	100	97.826	ENSMGAG00000011748	ARL1	100	96.685	Meleagris_gallopavo
ENSMUSG00000060904	Arl1	100	99.448	ENSMAUG00000021923	Arl1	100	99.448	Mesocricetus_auratus
ENSMUSG00000060904	Arl1	100	99.448	ENSMICG00000015801	ARL1	100	99.448	Microcebus_murinus
ENSMUSG00000060904	Arl1	100	100.000	ENSMOCG00000005852	Arl1	100	100.000	Microtus_ochrogaster
ENSMUSG00000060904	Arl1	100	94.928	ENSMMOG00000003353	arl1	63	93.750	Mola_mola
ENSMUSG00000060904	Arl1	100	97.826	ENSMODG00000003056	ARL1	100	97.790	Monodelphis_domestica
ENSMUSG00000060904	Arl1	100	94.928	ENSMALG00000003003	arl1	99	94.545	Monopterus_albus
ENSMUSG00000060904	Arl1	100	100.000	MGP_CAROLIEiJ_G0015712	Arl1	100	100.000	Mus_caroli
ENSMUSG00000060904	Arl1	100	100.000	MGP_PahariEiJ_G0031373	Arl1	100	100.000	Mus_pahari
ENSMUSG00000060904	Arl1	100	100.000	MGP_SPRETEiJ_G0016530	Arl1	100	100.000	Mus_spretus
ENSMUSG00000060904	Arl1	100	99.275	ENSMPUG00000011822	ARL1	99	98.895	Mustela_putorius_furo
ENSMUSG00000060904	Arl1	100	94.928	ENSMLUG00000025321	-	92	93.413	Myotis_lucifugus
ENSMUSG00000060904	Arl1	100	99.275	ENSMLUG00000002351	-	100	98.837	Myotis_lucifugus
ENSMUSG00000060904	Arl1	100	100.000	ENSNGAG00000007879	-	100	100.000	Nannospalax_galili
ENSMUSG00000060904	Arl1	100	95.652	ENSNBRG00000019783	arl1	92	95.210	Neolamprologus_brichardi
ENSMUSG00000060904	Arl1	100	98.551	ENSNLEG00000006223	ARL1	100	98.780	Nomascus_leucogenys
ENSMUSG00000060904	Arl1	100	97.826	ENSMEUG00000015525	ARL1	95	97.790	Notamacropus_eugenii
ENSMUSG00000060904	Arl1	100	98.343	ENSODEG00000019880	-	100	98.343	Octodon_degus
ENSMUSG00000060904	Arl1	100	100.000	ENSODEG00000019783	-	100	100.000	Octodon_degus
ENSMUSG00000060904	Arl1	100	100.000	ENSODEG00000010531	-	100	100.000	Octodon_degus
ENSMUSG00000060904	Arl1	100	95.652	ENSONIG00000009921	arl1	92	95.210	Oreochromis_niloticus
ENSMUSG00000060904	Arl1	100	99.448	ENSOCUG00000002217	ARL1	96	99.448	Oryctolagus_cuniculus
ENSMUSG00000060904	Arl1	100	95.652	ENSORLG00000008909	arl1	93	96.203	Oryzias_latipes
ENSMUSG00000060904	Arl1	100	95.652	ENSORLG00020005754	arl1	93	95.210	Oryzias_latipes_hni
ENSMUSG00000060904	Arl1	100	95.652	ENSORLG00015002736	arl1	93	96.203	Oryzias_latipes_hsok
ENSMUSG00000060904	Arl1	100	95.652	ENSOMEG00000023497	arl1	89	95.210	Oryzias_melastigma
ENSMUSG00000060904	Arl1	100	98.895	ENSOGAG00000015144	ARL1	100	98.895	Otolemur_garnettii
ENSMUSG00000060904	Arl1	100	99.448	ENSOARG00000015007	ARL1	100	99.448	Ovis_aries
ENSMUSG00000060904	Arl1	100	98.895	ENSPPAG00000034860	ARL1	100	98.895	Pan_paniscus
ENSMUSG00000060904	Arl1	100	99.448	ENSPPRG00000023908	ARL1	100	99.448	Panthera_pardus
ENSMUSG00000060904	Arl1	100	99.275	ENSPTIG00000002154	-	100	99.441	Panthera_tigris_altaica
ENSMUSG00000060904	Arl1	100	98.895	ENSPTRG00000005350	ARL1	100	98.895	Pan_troglodytes
ENSMUSG00000060904	Arl1	100	98.551	ENSPANG00000018816	ARL1	97	98.883	Papio_anubis
ENSMUSG00000060904	Arl1	100	95.652	ENSPKIG00000007118	arl1	100	95.732	Paramormyrops_kingsleyae
ENSMUSG00000060904	Arl1	100	97.826	ENSPSIG00000006539	ARL1	100	96.685	Pelodiscus_sinensis
ENSMUSG00000060904	Arl1	100	94.203	ENSPMGG00000004070	arl1	93	94.304	Periophthalmus_magnuspinnatus
ENSMUSG00000060904	Arl1	100	100.000	ENSPEMG00000008781	Arl1	100	100.000	Peromyscus_maniculatus_bairdii
ENSMUSG00000060904	Arl1	100	94.203	ENSPMAG00000002070	arl1	92	93.413	Petromyzon_marinus
ENSMUSG00000060904	Arl1	100	97.826	ENSPCIG00000009683	-	97	97.778	Phascolarctos_cinereus
ENSMUSG00000060904	Arl1	100	95.652	ENSPFOG00000003241	arl1	92	95.210	Poecilia_formosa
ENSMUSG00000060904	Arl1	100	95.652	ENSPLAG00000012898	arl1	92	95.210	Poecilia_latipinna
ENSMUSG00000060904	Arl1	100	95.652	ENSPMEG00000005938	arl1	89	95.210	Poecilia_mexicana
ENSMUSG00000060904	Arl1	100	95.652	ENSPREG00000013361	arl1	89	95.210	Poecilia_reticulata
ENSMUSG00000060904	Arl1	100	98.895	ENSPPYG00000004872	ARL1	100	98.895	Pongo_abelii
ENSMUSG00000060904	Arl1	100	97.101	ENSPCOG00000015554	-	100	95.580	Propithecus_coquereli
ENSMUSG00000060904	Arl1	100	99.448	ENSPVAG00000008119	ARL1	95	99.448	Pteropus_vampyrus
ENSMUSG00000060904	Arl1	100	95.652	ENSPNYG00000011671	arl1	92	95.210	Pundamilia_nyererei
ENSMUSG00000060904	Arl1	100	95.652	ENSPNAG00000028795	arl1	95	96.203	Pygocentrus_nattereri
ENSMUSG00000060904	Arl1	100	100.000	ENSRNOG00000005763	Arl1	100	100.000	Rattus_norvegicus
ENSMUSG00000060904	Arl1	100	98.895	ENSRBIG00000042560	ARL1	100	98.895	Rhinopithecus_bieti
ENSMUSG00000060904	Arl1	100	98.895	ENSRROG00000037996	ARL1	100	98.895	Rhinopithecus_roxellana
ENSMUSG00000060904	Arl1	100	99.448	ENSSBOG00000024352	-	100	99.448	Saimiri_boliviensis_boliviensis
ENSMUSG00000060904	Arl1	100	97.826	ENSSHAG00000004634	ARL1	100	97.238	Sarcophilus_harrisii
ENSMUSG00000060904	Arl1	100	95.652	ENSSFOG00015001665	arl1	92	95.210	Scleropages_formosus
ENSMUSG00000060904	Arl1	100	94.928	ENSSMAG00000016416	arl1	92	94.012	Scophthalmus_maximus
ENSMUSG00000060904	Arl1	100	94.928	ENSSDUG00000013898	arl1	89	95.570	Seriola_dumerili
ENSMUSG00000060904	Arl1	100	94.928	ENSSLDG00000012946	arl1	92	94.611	Seriola_lalandi_dorsalis
ENSMUSG00000060904	Arl1	100	99.275	ENSSARG00000013944	ARL1	100	98.324	Sorex_araneus
ENSMUSG00000060904	Arl1	100	98.551	ENSSPUG00000004578	ARL1	100	98.343	Sphenodon_punctatus
ENSMUSG00000060904	Arl1	100	94.928	ENSSPAG00000014633	arl1	93	94.012	Stegastes_partitus
ENSMUSG00000060904	Arl1	100	99.448	ENSSSCG00000000870	ARL1	100	99.448	Sus_scrofa
ENSMUSG00000060904	Arl1	100	97.826	ENSTGUG00000009085	-	100	97.207	Taeniopygia_guttata
ENSMUSG00000060904	Arl1	100	94.203	ENSTRUG00000006254	arl1	92	92.814	Takifugu_rubripes
ENSMUSG00000060904	Arl1	100	94.203	ENSTNIG00000006920	arl1	92	92.814	Tetraodon_nigroviridis
ENSMUSG00000060904	Arl1	100	99.275	ENSTBEG00000015546	ARL1	100	97.802	Tupaia_belangeri
ENSMUSG00000060904	Arl1	100	99.448	ENSTTRG00000017202	ARL1	95	99.448	Tursiops_truncatus
ENSMUSG00000060904	Arl1	100	99.448	ENSUMAG00000019547	ARL1	100	99.448	Ursus_maritimus
ENSMUSG00000060904	Arl1	100	99.448	ENSVPAG00000011621	ARL1	95	99.448	Vicugna_pacos
ENSMUSG00000060904	Arl1	100	99.448	ENSVVUG00000018044	ARL1	100	99.448	Vulpes_vulpes
ENSMUSG00000060904	Arl1	100	96.685	ENSXETG00000002540	arl1	100	96.685	Xenopus_tropicalis
ENSMUSG00000060904	Arl1	100	95.652	ENSXMAG00000028338	arl1	93	93.413	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003924	GTPase activity	-	ISO	Function
GO:0005525	GTP binding	21873635.	IBA	Function
GO:0005525	GTP binding	-	ISO	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	10980193.	IDA	Component
GO:0005794	Golgi apparatus	21873635.	IBA	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0005802	trans-Golgi network	-	ISO	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0007030	Golgi organization	-	ISO	Process
GO:0008047	enzyme activator activity	-	ISO	Function
GO:0009404	toxin metabolic process	-	ISO	Process
GO:0016020	membrane	-	IEA	Component
GO:0016192	vesicle-mediated transport	21873635.	IBA	Process
GO:0019904	protein domain specific binding	-	ISO	Function
GO:0031584	activation of phospholipase D activity	-	ISO	Process
GO:0034067	protein localization to Golgi apparatus	-	ISO	Process
GO:0042147	retrograde transport, endosome to Golgi	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0048193	Golgi vesicle transport	-	ISO	Process