EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000061086 (Gene tree)
Gene ID: 17896
Gene Symbol: Myl4
Alias: ELC|ELC1a|MLC1a|Myla
Full Name: myosin%2C light polypeptide 4
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 45091
Position: chr11: 104550663-104595753
Accession: 97267
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000136244	-	486	-	ENSMUSP00000118284	26 (aa)	-	F6XL79
ENSMUST00000018800	-	879	-	ENSMUSP00000018800	193 (aa)	-	Q9CZ19
ENSMUST00000155271	-	3273	-	-	- (aa)	-	-
ENSMUST00000153761	-	702	-	ENSMUSP00000114345	191 (aa)	-	A2A6Q8
ENSMUST00000123074	-	677	-	-	- (aa)	-	-
ENSMUST00000106956	-	900	XM_006532417	ENSMUSP00000102569	193 (aa)	XP_006532480	Q9CZ19
ENSMUST00000106957	-	943	XM_006532418	ENSMUSP00000102570	193 (aa)	XP_006532481	Q9CZ19
ENSMUST00000130588	-	781	-	ENSMUSP00000122748	74 (aa)	-	D6RFU4

Gene Model

Click here to download ENSMUSG00000061086's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04260	Cardiac muscle contraction	KEGG
mmu04261	Adrenergic signaling in cardiomyocytes	KEGG
mmu04371	Apelin signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000061086's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000061086	Myl4	74	45.775	WBGene00003371	mlc-3	91	45.775	Caenorhabditis_elegans
ENSMUSG00000061086	Myl4	92	75.000	ENSG00000092841	MYL6	99	74.172	Homo_sapiens
ENSMUSG00000061086	Myl4	92	75.000	ENSMUSG00000090841	Myl6	99	74.172	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002026	regulation of the force of heart contraction	-	ISO	Process
GO:0003785	actin monomer binding	-	ISO	Function
GO:0005509	calcium ion binding	-	IEA	Function
GO:0016459	myosin complex	-	IEA	Component
GO:0031672	A band	-	ISO	Component
GO:0032781	positive regulation of ATPase activity	-	ISO	Process
GO:0051015	actin filament binding	-	ISO	Function
GO:0060048	cardiac muscle contraction	-	ISO	Process