EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000062078 (Gene tree)
Gene ID
19317
Gene Symbol
Qk
Alias
1110003F05Rik|QkI|l(17)-1Wis|l17Wis1
Full Name
quaking
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Minus strand
Length
117254 bases
Position
chr17:10202601-10319854
Accession
97837
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000156665KH_1PF00013.299.4e-0611
ENSMUSP00000046740KH_1PF00013.299.7e-0611
ENSMUSP00000156511KH_1PF00013.291e-0511
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27768875High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem CellsnIC & mESC2016.09He CDOI: 10.1016/j.molcel.2016.09.034
27281784Identification of RNA binding Proteins in Macrophages by Interactome CaptureIC & RAW264.72016 Jun 8Liepelt ADOI: 10.1074/mcp.M115.056564
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseRBDmap & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000097414-5832-ENSMUSP00000095025319 (aa)-Q9QYS9
ENSMUST00000233645-8547XM_006523300ENSMUSP00000156511341 (aa)XP_006523363UPI0000029EBD
ENSMUST00000232721-755--- (aa)--
ENSMUST00000233828-5428-ENSMUSP00000156665319 (aa)-UPI0000071672
ENSMUST00000233684-650-ENSMUSP00000156519217 (aa)--
ENSMUST00000042296-6737-ENSMUSP00000046740325 (aa)-Q9QYS9
Gene Model
Click here to download ENSMUSG00000062078's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000062078's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000062078Qk7336.820ENSMUSG00000022332Khdrbs39848.000
ENSMUSG00000062078Qk5941.053ENSMUSG00000026058Khdrbs26437.395
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000062078Qk100100.000ENSG00000112531QKI100100.000Homo_sapiens
ENSMUSG00000062078Qk10078.947ENSAPOG00000002713qki210078.947Acanthochromis_polyacanthus
ENSMUSG00000062078Qk9999.107ENSAMEG00000008459QKI9999.107Ailuropoda_melanoleuca
ENSMUSG00000062078Qk10078.947ENSAOCG00000014271qki210078.947Amphiprion_ocellaris
ENSMUSG00000062078Qk10078.947ENSAPEG00000008210qki210078.947Amphiprion_percula
ENSMUSG00000062078Qk9977.681ENSATEG00000004355qki210078.233Anabas_testudineus
ENSMUSG00000062078Qk9983.072ENSATEG00000022584qkib9381.595Anabas_testudineus
ENSMUSG00000062078Qk8599.308ENSAPLG00000010080QKI10099.308Anas_platyrhynchos
ENSMUSG00000062078Qk10097.947ENSACAG00000003270QKI10097.947Anolis_carolinensis
ENSMUSG00000062078Qk100100.000ENSANAG00000029669QKI100100.000Aotus_nancymaae
ENSMUSG00000062078Qk9979.310ENSACLG00000007900qkib9179.310Astatotilapia_calliptera
ENSMUSG00000062078Qk10078.328ENSACLG00000026838qki210078.328Astatotilapia_calliptera
ENSMUSG00000062078Qk10091.250ENSAMXG00000042623qki210091.250Astyanax_mexicanus
ENSMUSG00000062078Qk10092.879ENSAMXG00000015808qkib10092.879Astyanax_mexicanus
ENSMUSG00000062078Qk100100.000ENSBTAG00000011593QKI100100.000Bos_taurus
ENSMUSG00000062078Qk100100.000ENSCJAG00000012368QKI100100.000Callithrix_jacchus
ENSMUSG00000062078Qk9996.460ENSCAFG00000000772QKI100100.000Canis_familiaris
ENSMUSG00000062078Qk100100.000ENSCAFG00020019085QKI100100.000Canis_lupus_dingo
ENSMUSG00000062078Qk100100.000ENSCHIG00000018891QKI100100.000Capra_hircus
ENSMUSG00000062078Qk85100.000ENSTSYG00000036757QKI100100.000Carlito_syrichta
ENSMUSG00000062078Qk100100.000ENSCCAG00000025230QKI100100.000Cebus_capucinus
ENSMUSG00000062078Qk100100.000ENSCATG00000037623-100100.000Cercocebus_atys
ENSMUSG00000062078Qk8897.674ENSCLAG00000006238-100100.000Chinchilla_lanigera
ENSMUSG00000062078Qk10097.361ENSCSAG00000012257QKI10097.361Chlorocebus_sabaeus
ENSMUSG00000062078Qk9789.728ENSCHOG00000006651QKI9789.728Choloepus_hoffmanni
ENSMUSG00000062078Qk10087.097ENSCPBG00000019817QKI10087.097Chrysemys_picta_bellii
ENSMUSG00000062078Qk100100.000ENSCANG00000000415QKI100100.000Colobus_angolensis_palliatus
ENSMUSG00000062078Qk100100.000ENSCGRG00001012114Qk100100.000Cricetulus_griseus_chok1gshd
ENSMUSG00000062078Qk57100.000ENSCGRG00000011540Qk100100.000Cricetulus_griseus_crigri
ENSMUSG00000062078Qk9977.259ENSCSEG00000013480qki29577.259Cynoglossus_semilaevis
ENSMUSG00000062078Qk9978.261ENSCVAG00000013803qki29978.261Cyprinodon_variegatus
ENSMUSG00000062078Qk9992.330ENSDARG00000002026qkib10099.254Danio_rerio
ENSMUSG00000062078Qk10090.625ENSDARG00000010018qki210090.625Danio_rerio
ENSMUSG00000062078Qk9195.513ENSDORG00000008151Qk100100.000Dipodomys_ordii
ENSMUSG00000062078Qk8699.317ENSETEG00000007676QKI10099.317Echinops_telfairi
ENSMUSG00000062078Qk9455.587ENSEBUG00000013799qki29957.143Eptatretus_burgeri
ENSMUSG00000062078Qk9959.880ENSEBUG00000009508qki29960.778Eptatretus_burgeri
ENSMUSG00000062078Qk100100.000ENSEASG00005019724QKI100100.000Equus_asinus_asinus
ENSMUSG00000062078Qk100100.000ENSECAG00000017504QKI100100.000Equus_caballus
ENSMUSG00000062078Qk8683.276ENSEEUG00000012054QKI10083.276Erinaceus_europaeus
ENSMUSG00000062078Qk9990.237ENSELUG00000016698QKI10090.237Esox_lucius
ENSMUSG00000062078Qk9970.821ENSELUG00000002282qki210070.821Esox_lucius
ENSMUSG00000062078Qk10099.692ENSFCAG00000019399QKI10099.692Felis_catus
ENSMUSG00000062078Qk8697.959ENSFALG00000012183QKI9797.959Ficedula_albicollis
ENSMUSG00000062078Qk86100.000ENSFDAG00000006081QKI100100.000Fukomys_damarensis
ENSMUSG00000062078Qk9978.841ENSFHEG00000009423qki29978.841Fundulus_heteroclitus
ENSMUSG00000062078Qk9973.913ENSGMOG00000004107qki29973.276Gadus_morhua
ENSMUSG00000062078Qk10098.827ENSGALG00000011555QKI10098.827Gallus_gallus
ENSMUSG00000062078Qk9977.101ENSGAFG00000011092qki29977.101Gambusia_affinis
ENSMUSG00000062078Qk10077.709ENSGACG00000003206qki210077.709Gasterosteus_aculeatus
ENSMUSG00000062078Qk10099.373ENSGAGG00000003901QKI10099.373Gopherus_agassizii
ENSMUSG00000062078Qk100100.000ENSGGOG00000000733QKI100100.000Gorilla_gorilla
ENSMUSG00000062078Qk9880.380ENSHBUG00000015851qkib9180.380Haplochromis_burtoni
ENSMUSG00000062078Qk10078.638ENSHBUG00000009123qki210078.638Haplochromis_burtoni
ENSMUSG00000062078Qk86100.000ENSHGLG00000003074-100100.000Heterocephalus_glaber_female
ENSMUSG00000062078Qk86100.000ENSHGLG00100000339-100100.000Heterocephalus_glaber_male
ENSMUSG00000062078Qk9976.163ENSHCOG00000015404qki29976.163Hippocampus_comes
ENSMUSG00000062078Qk10091.975ENSIPUG00000012637qki10092.593Ictalurus_punctatus
ENSMUSG00000062078Qk10090.000ENSIPUG00000014732qki210090.000Ictalurus_punctatus
ENSMUSG00000062078Qk85100.000ENSSTOG00000009113QKI100100.000Ictidomys_tridecemlineatus
ENSMUSG00000062078Qk8698.976ENSJJAG00000022765Qk10099.278Jaculus_jaculus
ENSMUSG00000062078Qk10078.947ENSKMAG00000009024qki210078.947Kryptolebias_marmoratus
ENSMUSG00000062078Qk9870.440ENSLBEG00000022702qkib9368.693Labrus_bergylta
ENSMUSG00000062078Qk10078.947ENSLBEG00000027428qki210078.947Labrus_bergylta
ENSMUSG00000062078Qk8496.864ENSLACG00000015585QKI10096.864Latimeria_chalumnae
ENSMUSG00000062078Qk10097.500ENSLOCG00000016506qki210097.500Lepisosteus_oculatus
ENSMUSG00000062078Qk9097.260ENSLAFG00000021654QKI10097.260Loxodonta_africana
ENSMUSG00000062078Qk85100.000ENSMFAG00000044069-100100.000Macaca_fascicularis
ENSMUSG00000062078Qk9073.776ENSMMUG00000049158-9573.540Macaca_mulatta
ENSMUSG00000062078Qk9097.260ENSMMUG00000000428-100100.000Macaca_mulatta
ENSMUSG00000062078Qk9894.311ENSMNEG00000043724-9994.311Macaca_nemestrina
ENSMUSG00000062078Qk86100.000ENSMLEG00000033347-100100.000Mandrillus_leucophaeus
ENSMUSG00000062078Qk9883.810ENSMAMG00000022446qkib9381.595Mastacembelus_armatus
ENSMUSG00000062078Qk9977.681ENSMAMG00000003069qki29977.681Mastacembelus_armatus
ENSMUSG00000062078Qk9979.310ENSMZEG00005018363qkib9179.747Maylandia_zebra
ENSMUSG00000062078Qk10078.328ENSMZEG00005004737qki210078.328Maylandia_zebra
ENSMUSG00000062078Qk8696.622ENSMGAG00000012341QKI10097.232Meleagris_gallopavo
ENSMUSG00000062078Qk8598.917ENSMAUG00000001920Qk10098.917Mesocricetus_auratus
ENSMUSG00000062078Qk100100.000ENSMICG00000009220QKI100100.000Microcebus_murinus
ENSMUSG00000062078Qk8996.711ENSMOCG00000008370Qk10099.659Microtus_ochrogaster
ENSMUSG00000062078Qk9979.560ENSMMOG00000007933qkib9378.154Mola_mola
ENSMUSG00000062078Qk10078.328ENSMMOG00000020767qki210078.328Mola_mola
ENSMUSG00000062078Qk10099.707ENSMODG00000006434QKI10099.707Monodelphis_domestica
ENSMUSG00000062078Qk9979.310ENSMALG00000009475qkib9377.914Monopterus_albus
ENSMUSG00000062078Qk10078.638ENSMALG00000015261qki210078.638Monopterus_albus
ENSMUSG00000062078Qk100100.000MGP_CAROLIEiJ_G0021057Qk100100.000Mus_caroli
ENSMUSG00000062078Qk100100.000MGP_PahariEiJ_G0023373Qk100100.000Mus_pahari
ENSMUSG00000062078Qk100100.000MGP_SPRETEiJ_G0021963Qk100100.000Mus_spretus
ENSMUSG00000062078Qk84100.000ENSMPUG00000006368QKI100100.000Mustela_putorius_furo
ENSMUSG00000062078Qk8897.342ENSMLUG00000002829QKI9997.342Myotis_lucifugus
ENSMUSG00000062078Qk8699.317ENSNGAG00000009989Qk10099.317Nannospalax_galili
ENSMUSG00000062078Qk10076.737ENSNBRG00000007549qki210076.737Neolamprologus_brichardi
ENSMUSG00000062078Qk8691.809ENSNLEG00000011478-10091.809Nomascus_leucogenys
ENSMUSG00000062078Qk8288.213ENSMEUG00000008112QKI9088.213Notamacropus_eugenii
ENSMUSG00000062078Qk8698.976ENSOPRG00000011662QKI10098.976Ochotona_princeps
ENSMUSG00000062078Qk100100.000ENSODEG00000007408QKI100100.000Octodon_degus
ENSMUSG00000062078Qk9979.688ENSONIG00000007133qkib9779.688Oreochromis_niloticus
ENSMUSG00000062078Qk10078.638ENSONIG00000008011qki210078.638Oreochromis_niloticus
ENSMUSG00000062078Qk8797.872ENSOANG00000011161QKI9897.872Ornithorhynchus_anatinus
ENSMUSG00000062078Qk9792.447ENSOCUG00000004117-9796.959Oryctolagus_cuniculus
ENSMUSG00000062078Qk10078.328ENSORLG00000027996qki210078.328Oryzias_latipes
ENSMUSG00000062078Qk10078.328ENSOMEG00000007147qki210078.328Oryzias_melastigma
ENSMUSG00000062078Qk100100.000ENSOGAG00000003634QKI100100.000Otolemur_garnettii
ENSMUSG00000062078Qk9096.104ENSOARG00000004811QKI100100.000Ovis_aries
ENSMUSG00000062078Qk9097.403ENSPPAG00000038059-100100.000Pan_paniscus
ENSMUSG00000062078Qk10099.707ENSPPRG00000013383QKI10099.707Panthera_pardus
ENSMUSG00000062078Qk8699.659ENSPTIG00000008797QKI8699.659Panthera_tigris_altaica
ENSMUSG00000062078Qk100100.000ENSPTRG00000018785QKI100100.000Pan_troglodytes
ENSMUSG00000062078Qk100100.000ENSPANG00000006711-100100.000Papio_anubis
ENSMUSG00000062078Qk10083.438ENSPKIG00000002778-10083.438Paramormyrops_kingsleyae
ENSMUSG00000062078Qk10086.420ENSPKIG00000010813qki210086.420Paramormyrops_kingsleyae
ENSMUSG00000062078Qk10099.413ENSPSIG00000012197QKI10099.413Pelodiscus_sinensis
ENSMUSG00000062078Qk9874.462ENSPMGG00000010555-9674.462Periophthalmus_magnuspinnatus
ENSMUSG00000062078Qk8997.039ENSPEMG00000007765Qk100100.000Peromyscus_maniculatus_bairdii
ENSMUSG00000062078Qk10099.707ENSPCIG00000020191QKI10099.707Phascolarctos_cinereus
ENSMUSG00000062078Qk9778.730ENSPFOG00000014078qki29976.487Poecilia_formosa
ENSMUSG00000062078Qk10078.947ENSPLAG00000020354qki210078.947Poecilia_latipinna
ENSMUSG00000062078Qk10077.341ENSPMEG00000004997qki210077.341Poecilia_mexicana
ENSMUSG00000062078Qk10078.638ENSPREG00000009154qki210078.638Poecilia_reticulata
ENSMUSG00000062078Qk9998.220ENSPPYG00000017160QKI10098.220Pongo_abelii
ENSMUSG00000062078Qk8682.935ENSPVAG00000015228QKI10082.935Pteropus_vampyrus
ENSMUSG00000062078Qk10076.435ENSPNYG00000004751qki210076.435Pundamilia_nyererei
ENSMUSG00000062078Qk10091.250ENSPNAG00000026483qki210091.250Pygocentrus_nattereri
ENSMUSG00000062078Qk8393.333ENSPNAG00000002418qkib8093.333Pygocentrus_nattereri
ENSMUSG00000062078Qk10098.769ENSRNOG00000048297LOC10834817510098.810Rattus_norvegicus
ENSMUSG00000062078Qk9097.403ENSRBIG00000043656QKI100100.000Rhinopithecus_bieti
ENSMUSG00000062078Qk86100.000ENSRROG00000040592QKI10097.037Rhinopithecus_roxellana
ENSMUSG00000062078Qk8599.278ENSSBOG00000036267QKI10099.278Saimiri_boliviensis_boliviensis
ENSMUSG00000062078Qk8396.591ENSSHAG00000014127QKI10096.591Sarcophilus_harrisii
ENSMUSG00000062078Qk10095.611ENSSFOG00015000145qki10095.611Scleropages_formosus
ENSMUSG00000062078Qk10089.062ENSSFOG00015003466qki210089.062Scleropages_formosus
ENSMUSG00000062078Qk10077.090ENSSMAG00000006070qki210077.090Scophthalmus_maximus
ENSMUSG00000062078Qk10078.638ENSSDUG00000013691qki210078.638Seriola_dumerili
ENSMUSG00000062078Qk9975.786ENSSDUG00000013229qkib9374.462Seriola_dumerili
ENSMUSG00000062078Qk10078.638ENSSLDG00000017943qki210078.638Seriola_lalandi_dorsalis
ENSMUSG00000062078Qk8698.976ENSSARG00000010852QKI10098.976Sorex_araneus
ENSMUSG00000062078Qk10098.534ENSSPUG00000012200QKI10098.534Sphenodon_punctatus
ENSMUSG00000062078Qk10078.638ENSSPAG00000002875qki210078.638Stegastes_partitus
ENSMUSG00000062078Qk10097.654ENSSSCG00000004029QKI100100.000Sus_scrofa
ENSMUSG00000062078Qk9992.262ENSTGUG00000009383QKI10092.262Taeniopygia_guttata
ENSMUSG00000062078Qk10078.019ENSTRUG00000018041qki210078.019Takifugu_rubripes
ENSMUSG00000062078Qk9977.329ENSTNIG00000011099qki29977.326Tetraodon_nigroviridis
ENSMUSG00000062078Qk10098.827ENSTTRG00000012050QKI9998.827Tursiops_truncatus
ENSMUSG00000062078Qk9693.598ENSUMAG00000011658QKI100100.000Ursus_maritimus
ENSMUSG00000062078Qk86100.000ENSVPAG00000009566QKI100100.000Vicugna_pacos
ENSMUSG00000062078Qk100100.000ENSVVUG00000001467QKI84100.000Vulpes_vulpes
ENSMUSG00000062078Qk10093.769ENSXETG00000015705qki10093.769Xenopus_tropicalis
ENSMUSG00000062078Qk9570.684ENSXCOG00000004131qki29571.166Xiphophorus_couchianus
ENSMUSG00000062078Qk9977.971ENSXMAG00000017056qki29977.971Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001570vasculogenesis11892011.IMPProcess
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding11892011.TASFunction
GO:0003729mRNA binding20631256.IDAFunction
GO:0005634nucleus10506177.25145264.IDAComponent
GO:0005634nucleus10506177.IMPComponent
GO:0005634nucleus-ISOComponent
GO:0005634nucleus11892011.TASComponent
GO:0005737cytoplasm10506177.IDAComponent
GO:0005737cytoplasm11892011.TASComponent
GO:0006397mRNA processing-ISOProcess
GO:0006417regulation of translation-IEAProcess
GO:0007275multicellular organism development-IEAProcess
GO:0007286spermatid development15148410.IGIProcess
GO:0008366axon ensheathment14169723.IMPProcess
GO:0008380RNA splicing-IEAProcess
GO:0010628positive regulation of gene expression1373175.IMPProcess
GO:0010667negative regulation of cardiac muscle cell apoptotic process-ISOProcess
GO:0010976positive regulation of neuron projection development-ISOProcess
GO:0017124SH3 domain binding-IEAFunction
GO:0030154cell differentiation-IEAProcess
GO:0042552myelination1150661.1373175.IMPProcess
GO:0042692muscle cell differentiation14706070.IMPProcess
GO:0042759long-chain fatty acid biosynthetic process1150661.IMPProcess
GO:0045202synapse16452087.EXPComponent
GO:0045202synapse16452087.IDAComponent
GO:0048255mRNA stabilization-ISOProcess
GO:0048714positive regulation of oligodendrocyte differentiation-ISOProcess
GO:0051028mRNA transport-IEAProcess
GO:00611583'-UTR-mediated mRNA destabilization20631256.IDAProcess

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