EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000062604 (Gene tree)
Gene ID: 20817
Gene Symbol: Srpk2
Alias: WBP6|mSRPK2
Full Name: serine/arginine-rich protein specific kinase 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 181354
Position: chr5: 23503264-23684617
Accession: 1201408
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000198719	-	2790	-	-	- (aa)	-	-
ENSMUST00000198661	-	440	-	ENSMUSP00000142494	57 (aa)	-	A0A0G2JDT6
ENSMUST00000200173	-	1320	-	-	- (aa)	-	-
ENSMUST00000197622	-	1963	-	-	- (aa)	-	-
ENSMUST00000197985	-	653	-	ENSMUSP00000142554	129 (aa)	-	A0A0G2JDY2
ENSMUST00000196388	-	946	-	ENSMUSP00000143453	134 (aa)	-	A0A0G2JG74
ENSMUST00000196929	-	4259	-	ENSMUSP00000143216	156 (aa)	-	Q6P5E1
ENSMUST00000196592	-	1826	-	-	- (aa)	-	-
ENSMUST00000088392	-	6491	XM_006535660	ENSMUSP00000085734	682 (aa)	XP_006535723	A0A0R4J124
ENSMUST00000198549	-	460	-	ENSMUSP00000142781	22 (aa)	-	A0A0G2JEI1

Gene Model

Click here to download ENSMUSG00000062604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000062604's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000062604	Srpk2	100	100.000	ENSG00000135250	SRPK2	100	98.125	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000245	spliceosomal complex assembly	21873635.	IBA	Process
GO:0000245	spliceosomal complex assembly	9446799.	IDA	Process
GO:0000245	spliceosomal complex assembly	-	ISO	Process
GO:0000287	magnesium ion binding	9446799.	IDA	Function
GO:0000287	magnesium ion binding	-	ISO	Function
GO:0001525	angiogenesis	19906640.	IDA	Process
GO:0004672	protein kinase activity	-	IEA	Function
GO:0004674	protein serine/threonine kinase activity	21873635.	IBA	Function
GO:0004674	protein serine/threonine kinase activity	9446799.	IDA	Function
GO:0004674	protein serine/threonine kinase activity	-	ISO	Function
GO:0005515	protein binding	10196197.	IPI	Function
GO:0005524	ATP binding	9446799.	IDA	Function
GO:0005524	ATP binding	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	9446799.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	9446799.19592491.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0006468	protein phosphorylation	9446799.19592491.	IDA	Process
GO:0006468	protein phosphorylation	-	ISO	Process
GO:0008284	positive regulation of cell proliferation	19592491.	IDA	Process
GO:0008284	positive regulation of cell proliferation	-	ISO	Process
GO:0008380	RNA splicing	9446799.	IDA	Process
GO:0008380	RNA splicing	-	ISO	Process
GO:0010468	regulation of gene expression	21873635.	IBA	Process
GO:0010628	positive regulation of gene expression	19592491.	IDA	Process
GO:0016301	kinase activity	-	IEA	Function
GO:0016310	phosphorylation	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0030154	cell differentiation	-	IEA	Process
GO:0035063	nuclear speck organization	9446799.	IDA	Process
GO:0035556	intracellular signal transduction	21873635.	IBA	Process
GO:0035556	intracellular signal transduction	9446799.	IDA	Process
GO:0035556	intracellular signal transduction	-	ISO	Process
GO:0043525	positive regulation of neuron apoptotic process	19592491.	IDA	Process
GO:0045070	positive regulation of viral genome replication	-	ISO	Process
GO:0045071	negative regulation of viral genome replication	-	ISO	Process
GO:0045787	positive regulation of cell cycle	19592491.	IDA	Process
GO:0050684	regulation of mRNA processing	21873635.	IBA	Process
GO:0071889	14-3-3 protein binding	19592491.	IDA	Function