EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000063229 (Gene tree)
Gene ID: 16828
Gene Symbol: Ldha
Alias: LDH-A|Ldh-1|Ldh1|l7R2|lactate dehydrogenase-A
Full Name: lactate dehydrogenase A
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 14153
Position: chr7: 46841475-46855627
Accession: 96759
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000210631	-	685	-	ENSMUSP00000147825	205 (aa)	-	A0A1B0GS79
ENSMUST00000147535	-	912	-	ENSMUSP00000123356	236 (aa)	-	D3YZQ9
ENSMUST00000210198	-	740	-	-	- (aa)	-	-
ENSMUST00000124696	-	625	-	-	- (aa)	-	-
ENSMUST00000133062	-	579	-	ENSMUSP00000147640	68 (aa)	-	A0A1B0GRS2
ENSMUST00000125862	-	406	-	ENSMUSP00000147460	66 (aa)	-	A0A1B0GRC1
ENSMUST00000132157	-	645	-	ENSMUSP00000148190	176 (aa)	-	A0A1B0GT41
ENSMUST00000005051	-	1766	-	ENSMUSP00000103267	332 (aa)	-	P06151
ENSMUST00000092621	-	934	-	ENSMUSP00000097661	236 (aa)	-	D3YZQ9
ENSMUST00000209984	-	1815	-	ENSMUSP00000148107	361 (aa)	-	A0A1B0GSX0
ENSMUST00000210467	-	513	-	ENSMUSP00000147988	128 (aa)	-	A0A1B0GSL7
ENSMUST00000210815	-	1535	-	ENSMUSP00000148046	315 (aa)	-	A0A1B0GSR9
ENSMUST00000209548	-	1277	-	ENSMUSP00000147293	201 (aa)	-	A0A1B0GQX5
ENSMUST00000048209	-	1588	-	ENSMUSP00000036386	332 (aa)	-	P06151
ENSMUST00000210968	-	399	-	ENSMUSP00000147697	104 (aa)	-	A0A1B0GRW9

Gene Model

Click here to download ENSMUSG00000063229's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00010	Glycolysis / Gluconeogenesis	KEGG
mmu00270	Cysteine and methionine metabolism	KEGG
mmu00620	Pyruvate metabolism	KEGG
mmu00640	Propanoate metabolism	KEGG
mmu01100	Metabolic pathways	KEGG
mmu04066	HIF-1 signaling pathway	KEGG
mmu04922	Glucagon signaling pathway	KEGG
mmu05230	Central carbon metabolism in cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000063229's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000063229	Ldha	100	95.588	ENSG00000134333	LDHA	100	95.833	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003824	catalytic activity	-	IEA	Function
GO:0004457	lactate dehydrogenase activity	8224816.	IMP	Function
GO:0004459	L-lactate dehydrogenase activity	7323947.	IDA	Function
GO:0004459	L-lactate dehydrogenase activity	3796661.	IMP	Function
GO:0005515	protein binding	12107167.	IPI	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005829	cytosol	11980919.	IDA	Component
GO:0005975	carbohydrate metabolic process	-	IEA	Process
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	-	IEA	Function
GO:0019244	lactate biosynthetic process from pyruvate	7323947.	IC	Process
GO:0019661	glucose catabolic process to lactate via pyruvate	8224816.	IMP	Process
GO:0019752	carboxylic acid metabolic process	-	IEA	Process
GO:0031668	cellular response to extracellular stimulus	10322635.	IDA	Process
GO:0035686	sperm fibrous sheath	16687649.	IDA	Component
GO:0055114	oxidation-reduction process	-	IEA	Process