EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000029303	-	6090	-	ENSMUSP00000029303	865 (aa)	-	G3X8Y3
ENSMUST00000194685	-	2319	-	-	- (aa)	-	-
ENSMUST00000193266	-	7480	-	ENSMUSP00000141433	815 (aa)	-	A0A0A6YW80
ENSMUST00000193267	-	3073	-	-	- (aa)	-	-
ENSMUST00000193694	-	667	-	-	- (aa)	-	-
ENSMUST00000192197	-	712	-	ENSMUSP00000141886	237 (aa)	-	A0A0A6YX86
ENSMUST00000192419	-	637	-	ENSMUSP00000141965	126 (aa)	-	A0A0A6YXF4
ENSMUST00000195430	-	2975	-	-	- (aa)	-	-
ENSMUST00000192523	-	629	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000063273	Naa15	100	100.000	ENSG00000164134	NAA15	100	98.497	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001525	angiogenesis	-	IEA	Process
GO:0004596	peptide alpha-N-acetyltransferase activity	21873635.	IBA	Function
GO:0005515	protein binding	12888564.	IPI	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005667	transcription factor complex	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	12888564.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006474	N-terminal protein amino acid acetylation	-	ISO	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0008080	N-acetyltransferase activity	10842358.12888564.	IDA	Function
GO:0016407	acetyltransferase activity	-	ISO	Function
GO:0017196	N-terminal peptidyl-methionine acetylation	21873635.	IBA	Process
GO:0030154	cell differentiation	-	IEA	Process
GO:0031415	NatA complex	21873635.	IBA	Component
GO:0031415	NatA complex	-	ISO	Component
GO:0043022	ribosome binding	-	ISO	Function
GO:0043022	ribosome binding	-	ISO	Function
GO:0043066	negative regulation of apoptotic process	-	ISO	Process
GO:0045893	positive regulation of transcription, DNA-templated	-	ISO	Process
GO:0050821	protein stabilization	-	ISO	Process