EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000063334 (Gene tree)
Gene ID: 52705
Gene Symbol: Krr1
Alias: 2610511F02Rik|D10Ertd773e|Hrb2
Full Name: KRR1%2C small subunit (SSU) processome component%2C homolog (yeast)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 15769
Position: chr10: 111972664-111988432
Accession: 1289274
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000162678	-	1149	-	-	- (aa)	-	-
ENSMUST00000075924	-	3451	-	-	- (aa)	-	-
ENSMUST00000174653	-	972	-	ENSMUSP00000134408	323 (aa)	-	G3UZA0
ENSMUST00000163048	-	5023	-	ENSMUSP00000125746	380 (aa)	-	Q8BGA5

Gene Model

Click here to download ENSMUSG00000063334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000063334's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000063334	Krr1	98	92.513	ENSG00000111615	KRR1	100	92.126	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0042254	ribosome biogenesis	-	IEA	Process
GO:0045171	intercellular bridge	-	ISO	Component