EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000063694 (Gene tree)
Gene ID: 13063
Gene Symbol: Cycs
Alias: -
Full Name: cytochrome c%2C somatic
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 3976
Position: chr6: 50562563-50566538
Accession: 88578
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000161401	-	3123	-	ENSMUSP00000124523	105 (aa)	-	P62897
ENSMUST00000077766	-	607	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000063694's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu01524	Platinum drug resistance	KEGG
mmu04115	p53 signaling pathway	KEGG
mmu04210	Apoptosis	KEGG
mmu04215	Apoptosis - multiple species	KEGG
mmu04932	Non-alcoholic fatty liver disease (NAFLD)	KEGG
mmu05010	Alzheimer disease	KEGG
mmu05012	Parkinson disease	KEGG
mmu05014	Amyotrophic lateral sclerosis (ALS)	KEGG
mmu05016	Huntington disease	KEGG
mmu05134	Legionellosis	KEGG
mmu05145	Toxoplasmosis	KEGG
mmu05152	Tuberculosis	KEGG
mmu05160	Hepatitis C	KEGG
mmu05161	Hepatitis B	KEGG
mmu05162	Measles	KEGG
mmu05163	Human cytomegalovirus infection	KEGG
mmu05164	Influenza A	KEGG
mmu05167	Kaposi sarcoma-associated herpesvirus infection	KEGG
mmu05168	Herpes simplex virus 1 infection	KEGG
mmu05169	Epstein-Barr virus infection	KEGG
mmu05170	Human immunodeficiency virus 1 infection	KEGG
mmu05200	Pathways in cancer	KEGG
mmu05210	Colorectal cancer	KEGG
mmu05222	Small cell lung cancer	KEGG
mmu05416	Viral myocarditis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000063694's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000063694	Cycs	100	100.000	ENSMUSG00000058927	Gm10053	100	100.000	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	ISO	Component
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	14623868.14657025.16103131.16469926.	IDA	Component
GO:0005739	mitochondrion	20671748.	ISO	Component
GO:0005758	mitochondrial intermembrane space	21873635.	IBA	Component
GO:0005758	mitochondrial intermembrane space	-	ISO	Component
GO:0005829	cytosol	14657025.15271982.16469926.	IDA	Component
GO:0005829	cytosol	17571083.	ISO	Component
GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	21873635.	IBA	Process
GO:0006123	mitochondrial electron transport, cytochrome c to oxygen	21873635.	IBA	Process
GO:0006915	apoptotic process	16757556.	IDA	Process
GO:0008635	activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c	10830166.14623868.15907471.	IMP	Process
GO:0019899	enzyme binding	-	ISO	Function
GO:0020037	heme binding	16757556.	IDA	Function
GO:0042743	hydrogen peroxide metabolic process	16757556.	IDA	Process
GO:0043209	myelin sheath	17634366.	HDA	Component
GO:0045155	electron transporter, transferring electrons from CoQH2-cytochrome c reductase complex and cytochrome c oxidase complex activity	-	ISO	Function
GO:0051260	protein homooligomerization	10830166.	IMP	Process