EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000063808 (Gene tree)
Gene ID: 67471
Gene Symbol: Gpatch1
Alias: 1300003A17Rik|Gpatc1
Full Name: G patch domain containing 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 41905 bases
Position: chr7:35276536-35318440
Accession: 1914721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000078632	DUF1604	PF07713.13	9.1e-36	1	1
ENSMUSP00000078632	G-patch	PF01585.23	1.3e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000131213	-	2991	-	ENSMUSP00000117475	883 (aa)	-	D6RET6
ENSMUST00000206758	-	621	-	-	- (aa)	-	-
ENSMUST00000153778	-	694	-	-	- (aa)	-	-
ENSMUST00000079693	-	3065	-	ENSMUSP00000078632	930 (aa)	-	Q9DBM1
ENSMUST00000131143	-	2584	-	ENSMUSP00000121711	98 (aa)	-	D6RJ67

Gene Model

Click here to download ENSMUSG00000063808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000063808's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000063808	Gpatch1	100	94.898	ENSG00000076650	GPATCH1	100	84.244	Homo_sapiens
ENSMUSG00000063808	Gpatch1	98	77.083	ENSAPOG00000009586	-	80	77.083	Acanthochromis_polyacanthus
ENSMUSG00000063808	Gpatch1	100	95.918	ENSAMEG00000015575	GPATCH1	100	84.657	Ailuropoda_melanoleuca
ENSMUSG00000063808	Gpatch1	98	76.042	ENSACIG00000001397	-	74	76.042	Amphilophus_citrinellus
ENSMUSG00000063808	Gpatch1	78	73.684	ENSAOCG00000009040	-	80	73.684	Amphiprion_ocellaris
ENSMUSG00000063808	Gpatch1	98	76.042	ENSAOCG00000006668	gpatch1	75	70.718	Amphiprion_ocellaris
ENSMUSG00000063808	Gpatch1	98	77.083	ENSAPEG00000000026	gpatch1	94	50.668	Amphiprion_percula
ENSMUSG00000063808	Gpatch1	98	77.083	ENSATEG00000014494	gpatch1	94	50.493	Anabas_testudineus
ENSMUSG00000063808	Gpatch1	79	79.221	ENSAPLG00000007584	GPATCH1	99	59.487	Anas_platyrhynchos
ENSMUSG00000063808	Gpatch1	100	96.939	ENSANAG00000027002	GPATCH1	100	84.137	Aotus_nancymaae
ENSMUSG00000063808	Gpatch1	98	77.083	ENSACLG00000024740	gpatch1	79	54.741	Astatotilapia_calliptera
ENSMUSG00000063808	Gpatch1	98	73.958	ENSAMXG00000020177	gpatch1	98	51.958	Astyanax_mexicanus
ENSMUSG00000063808	Gpatch1	100	95.918	ENSBTAG00000000721	GPATCH1	100	80.687	Bos_taurus
ENSMUSG00000063808	Gpatch1	100	96.939	ENSCJAG00000000684	GPATCH1	100	83.923	Callithrix_jacchus
ENSMUSG00000063808	Gpatch1	100	94.898	ENSCAFG00000007457	GPATCH1	84	84.137	Canis_familiaris
ENSMUSG00000063808	Gpatch1	100	94.898	ENSCAFG00020019731	GPATCH1	93	84.144	Canis_lupus_dingo
ENSMUSG00000063808	Gpatch1	100	95.918	ENSCHIG00000019626	GPATCH1	100	81.116	Capra_hircus
ENSMUSG00000063808	Gpatch1	97	79.162	ENSCAPG00000008827	GPATCH1	100	78.251	Cavia_aperea
ENSMUSG00000063808	Gpatch1	100	90.816	ENSCPOG00000024477	GPATCH1	100	80.535	Cavia_porcellus
ENSMUSG00000063808	Gpatch1	100	94.898	ENSCCAG00000024676	GPATCH1	100	83.601	Cebus_capucinus
ENSMUSG00000063808	Gpatch1	100	95.918	ENSCATG00000043637	GPATCH1	100	83.405	Cercocebus_atys
ENSMUSG00000063808	Gpatch1	96	80.605	ENSCLAG00000003395	-	93	81.010	Chinchilla_lanigera
ENSMUSG00000063808	Gpatch1	100	95.918	ENSCSAG00000004743	GPATCH1	100	82.441	Chlorocebus_sabaeus
ENSMUSG00000063808	Gpatch1	92	73.032	ENSCHOG00000012865	GPATCH1	100	73.032	Choloepus_hoffmanni
ENSMUSG00000063808	Gpatch1	70	89.855	ENSCPBG00000000666	GPATCH1	92	67.804	Chrysemys_picta_bellii
ENSMUSG00000063808	Gpatch1	96	55.319	ENSCING00000012518	-	84	34.112	Ciona_intestinalis
ENSMUSG00000063808	Gpatch1	90	79.557	ENSCANG00000012540	GPATCH1	100	79.557	Colobus_angolensis_palliatus
ENSMUSG00000063808	Gpatch1	97	89.659	ENSCGRG00001016736	Gpatch1	100	89.659	Cricetulus_griseus_chok1gshd
ENSMUSG00000063808	Gpatch1	93	74.439	ENSCGRG00000005069	Gpatch1	92	73.782	Cricetulus_griseus_crigri
ENSMUSG00000063808	Gpatch1	98	69.792	ENSCSEG00000019456	-	84	62.385	Cynoglossus_semilaevis
ENSMUSG00000063808	Gpatch1	98	75.000	ENSDARG00000033418	gpatch1	93	51.078	Danio_rerio
ENSMUSG00000063808	Gpatch1	100	91.837	ENSDNOG00000005291	GPATCH1	96	81.944	Dasypus_novemcinctus
ENSMUSG00000063808	Gpatch1	100	93.878	ENSDORG00000012546	Gpatch1	96	79.374	Dipodomys_ordii
ENSMUSG00000063808	Gpatch1	94	58.511	FBgn0036386	CG8833	67	33.866	Drosophila_melanogaster
ENSMUSG00000063808	Gpatch1	100	89.796	ENSETEG00000003626	GPATCH1	94	73.928	Echinops_telfairi
ENSMUSG00000063808	Gpatch1	96	61.702	ENSEBUG00000011286	gpatch1	94	36.865	Eptatretus_burgeri
ENSMUSG00000063808	Gpatch1	100	93.878	ENSEASG00005021162	GPATCH1	93	85.357	Equus_asinus_asinus
ENSMUSG00000063808	Gpatch1	100	93.878	ENSECAG00000022743	GPATCH1	90	84.125	Equus_caballus
ENSMUSG00000063808	Gpatch1	100	89.796	ENSEEUG00000012925	GPATCH1	77	76.884	Erinaceus_europaeus
ENSMUSG00000063808	Gpatch1	98	71.875	ENSELUG00000018195	gpatch1	92	49.615	Esox_lucius
ENSMUSG00000063808	Gpatch1	100	94.898	ENSFCAG00000014917	GPATCH1	100	83.155	Felis_catus
ENSMUSG00000063808	Gpatch1	99	76.531	ENSFALG00000007821	GPATCH1	99	62.566	Ficedula_albicollis
ENSMUSG00000063808	Gpatch1	96	81.271	ENSFDAG00000003871	GPATCH1	100	81.271	Fukomys_damarensis
ENSMUSG00000063808	Gpatch1	98	71.875	ENSFHEG00000007459	-	84	72.165	Fundulus_heteroclitus
ENSMUSG00000063808	Gpatch1	78	73.684	ENSGMOG00000003830	gpatch1	99	51.972	Gadus_morhua
ENSMUSG00000063808	Gpatch1	100	75.758	ENSGALG00000004839	GPATCH1	96	62.641	Gallus_gallus
ENSMUSG00000063808	Gpatch1	97	73.684	ENSGAFG00000006163	-	85	73.684	Gambusia_affinis
ENSMUSG00000063808	Gpatch1	98	72.917	ENSGACG00000017544	gpatch1	96	49.829	Gasterosteus_aculeatus
ENSMUSG00000063808	Gpatch1	100	83.000	ENSGAGG00000010067	GPATCH1	100	62.764	Gopherus_agassizii
ENSMUSG00000063808	Gpatch1	98	83.642	ENSGGOG00000010862	GPATCH1	100	84.141	Gorilla_gorilla
ENSMUSG00000063808	Gpatch1	98	78.125	ENSHBUG00000023462	gpatch1	90	52.548	Haplochromis_burtoni
ENSMUSG00000063808	Gpatch1	100	92.857	ENSHGLG00000009334	GPATCH1	100	81.799	Heterocephalus_glaber_female
ENSMUSG00000063808	Gpatch1	100	92.857	ENSHGLG00100018074	GPATCH1	100	81.906	Heterocephalus_glaber_male
ENSMUSG00000063808	Gpatch1	90	71.591	ENSHCOG00000006876	-	70	71.591	Hippocampus_comes
ENSMUSG00000063808	Gpatch1	98	72.917	ENSIPUG00000014977	gpatch1	93	50.927	Ictalurus_punctatus
ENSMUSG00000063808	Gpatch1	100	90.816	ENSSTOG00000003720	GPATCH1	100	83.280	Ictidomys_tridecemlineatus
ENSMUSG00000063808	Gpatch1	100	93.878	ENSJJAG00000023765	Gpatch1	100	85.699	Jaculus_jaculus
ENSMUSG00000063808	Gpatch1	98	75.000	ENSKMAG00000017950	gpatch1	93	50.948	Kryptolebias_marmoratus
ENSMUSG00000063808	Gpatch1	69	73.529	ENSLBEG00000028648	-	78	67.105	Labrus_bergylta
ENSMUSG00000063808	Gpatch1	98	73.958	ENSLBEG00000026527	gpatch1	92	49.946	Labrus_bergylta
ENSMUSG00000063808	Gpatch1	71	82.857	ENSLACG00000008130	GPATCH1	99	57.190	Latimeria_chalumnae
ENSMUSG00000063808	Gpatch1	100	73.469	ENSLOCG00000001800	gpatch1	92	54.515	Lepisosteus_oculatus
ENSMUSG00000063808	Gpatch1	100	96.939	ENSLAFG00000013589	GPATCH1	100	83.047	Loxodonta_africana
ENSMUSG00000063808	Gpatch1	100	95.918	ENSMFAG00000034418	GPATCH1	96	84.888	Macaca_fascicularis
ENSMUSG00000063808	Gpatch1	100	94.898	ENSMMUG00000011790	GPATCH1	100	84.261	Macaca_mulatta
ENSMUSG00000063808	Gpatch1	100	91.837	ENSMNEG00000045084	GPATCH1	100	83.816	Macaca_nemestrina
ENSMUSG00000063808	Gpatch1	100	73.741	ENSMLEG00000043840	GPATCH1	100	73.741	Mandrillus_leucophaeus
ENSMUSG00000063808	Gpatch1	98	77.083	ENSMZEG00005001926	gpatch1	80	54.741	Maylandia_zebra
ENSMUSG00000063808	Gpatch1	92	77.778	ENSMGAG00000005775	GPATCH1	92	63.857	Meleagris_gallopavo
ENSMUSG00000063808	Gpatch1	95	77.005	ENSMICG00000004829	GPATCH1	96	76.437	Microcebus_murinus
ENSMUSG00000063808	Gpatch1	100	93.878	ENSMOCG00000000174	Gpatch1	93	90.888	Microtus_ochrogaster
ENSMUSG00000063808	Gpatch1	98	72.917	ENSMMOG00000002140	gpatch1	87	50.943	Mola_mola
ENSMUSG00000063808	Gpatch1	100	85.714	ENSMODG00000012226	GPATCH1	100	70.244	Monodelphis_domestica
ENSMUSG00000063808	Gpatch1	98	73.958	ENSMALG00000014386	gpatch1	94	50.442	Monopterus_albus
ENSMUSG00000063808	Gpatch1	100	98.980	MGP_PahariEiJ_G0012816	Gpatch1	100	98.980	Mus_pahari
ENSMUSG00000063808	Gpatch1	100	99.435	MGP_SPRETEiJ_G0030681	Gpatch1	100	99.435	Mus_spretus
ENSMUSG00000063808	Gpatch1	100	94.898	ENSMPUG00000007658	GPATCH1	100	83.798	Mustela_putorius_furo
ENSMUSG00000063808	Gpatch1	100	92.857	ENSMLUG00000012161	GPATCH1	100	83.029	Myotis_lucifugus
ENSMUSG00000063808	Gpatch1	100	95.918	ENSNGAG00000012455	Gpatch1	100	85.929	Nannospalax_galili
ENSMUSG00000063808	Gpatch1	100	76.531	ENSNBRG00000003140	-	88	69.369	Neolamprologus_brichardi
ENSMUSG00000063808	Gpatch1	100	94.898	ENSNLEG00000007659	GPATCH1	100	84.244	Nomascus_leucogenys
ENSMUSG00000063808	Gpatch1	82	65.746	ENSMEUG00000015174	GPATCH1	77	65.746	Notamacropus_eugenii
ENSMUSG00000063808	Gpatch1	100	90.816	ENSODEG00000007103	GPATCH1	99	81.672	Octodon_degus
ENSMUSG00000063808	Gpatch1	100	76.531	ENSONIG00000003302	gpatch1	94	53.080	Oreochromis_niloticus
ENSMUSG00000063808	Gpatch1	96	88.298	ENSOANG00000012732	GPATCH1	99	70.753	Ornithorhynchus_anatinus
ENSMUSG00000063808	Gpatch1	100	93.878	ENSOCUG00000015905	GPATCH1	100	85.944	Oryctolagus_cuniculus
ENSMUSG00000063808	Gpatch1	98	71.875	ENSORLG00000018706	gpatch1	92	50.113	Oryzias_latipes
ENSMUSG00000063808	Gpatch1	98	71.875	ENSORLG00020014884	-	93	58.333	Oryzias_latipes_hni
ENSMUSG00000063808	Gpatch1	98	71.875	ENSORLG00015012287	-	96	58.537	Oryzias_latipes_hsok
ENSMUSG00000063808	Gpatch1	98	71.875	ENSOMEG00000022688	gpatch1	95	48.616	Oryzias_melastigma
ENSMUSG00000063808	Gpatch1	100	93.878	ENSOGAG00000004016	GPATCH1	96	86.957	Otolemur_garnettii
ENSMUSG00000063808	Gpatch1	93	94.505	ENSOARG00000004365	GPATCH1	99	80.649	Ovis_aries
ENSMUSG00000063808	Gpatch1	100	93.939	ENSPPAG00000020990	GPATCH1	100	83.923	Pan_paniscus
ENSMUSG00000063808	Gpatch1	100	94.898	ENSPPRG00000017245	GPATCH1	100	83.369	Panthera_pardus
ENSMUSG00000063808	Gpatch1	100	94.898	ENSPTIG00000019649	GPATCH1	100	84.120	Panthera_tigris_altaica
ENSMUSG00000063808	Gpatch1	100	94.898	ENSPTRG00000010803	GPATCH1	100	83.708	Pan_troglodytes
ENSMUSG00000063808	Gpatch1	100	95.918	ENSPANG00000012374	GPATCH1	97	84.491	Papio_anubis
ENSMUSG00000063808	Gpatch1	96	72.340	ENSPKIG00000020745	gpatch1	77	56.505	Paramormyrops_kingsleyae
ENSMUSG00000063808	Gpatch1	100	82.653	ENSPSIG00000013433	GPATCH1	100	64.089	Pelodiscus_sinensis
ENSMUSG00000063808	Gpatch1	100	70.408	ENSPMGG00000014320	-	74	70.408	Periophthalmus_magnuspinnatus
ENSMUSG00000063808	Gpatch1	100	96.939	ENSPEMG00000000636	Gpatch1	100	90.118	Peromyscus_maniculatus_bairdii
ENSMUSG00000063808	Gpatch1	100	86.735	ENSPCIG00000021003	GPATCH1	98	71.266	Phascolarctos_cinereus
ENSMUSG00000063808	Gpatch1	98	76.042	ENSPLAG00000017953	-	99	76.042	Poecilia_latipinna
ENSMUSG00000063808	Gpatch1	100	75.510	ENSPMEG00000017559	-	100	75.510	Poecilia_mexicana
ENSMUSG00000063808	Gpatch1	98	75.000	ENSPREG00000008264	gpatch1	84	48.732	Poecilia_reticulata
ENSMUSG00000063808	Gpatch1	100	94.898	ENSPPYG00000009824	GPATCH1	100	81.565	Pongo_abelii
ENSMUSG00000063808	Gpatch1	87	74.645	ENSPCAG00000005931	GPATCH1	93	74.900	Procavia_capensis
ENSMUSG00000063808	Gpatch1	100	95.918	ENSPCOG00000009674	GPATCH1	98	79.698	Propithecus_coquereli
ENSMUSG00000063808	Gpatch1	100	94.898	ENSPVAG00000017767	GPATCH1	91	83.956	Pteropus_vampyrus
ENSMUSG00000063808	Gpatch1	100	76.531	ENSPNYG00000018189	gpatch1	89	55.414	Pundamilia_nyererei
ENSMUSG00000063808	Gpatch1	98	73.958	ENSPNAG00000013187	gpatch1	93	50.689	Pygocentrus_nattereri
ENSMUSG00000063808	Gpatch1	100	97.959	ENSRNOG00000011584	Gpatch1	100	95.806	Rattus_norvegicus
ENSMUSG00000063808	Gpatch1	100	76.874	ENSRBIG00000034723	GPATCH1	100	73.369	Rhinopithecus_bieti
ENSMUSG00000063808	Gpatch1	100	94.898	ENSRROG00000024428	GPATCH1	100	84.244	Rhinopithecus_roxellana
ENSMUSG00000063808	Gpatch1	100	94.898	ENSSBOG00000034650	GPATCH1	100	83.923	Saimiri_boliviensis_boliviensis
ENSMUSG00000063808	Gpatch1	100	88.776	ENSSHAG00000016016	GPATCH1	99	71.140	Sarcophilus_harrisii
ENSMUSG00000063808	Gpatch1	98	68.750	ENSSFOG00015011535	gpatch1	92	52.790	Scleropages_formosus
ENSMUSG00000063808	Gpatch1	98	71.875	ENSSMAG00000002883	gpatch1	96	46.130	Scophthalmus_maximus
ENSMUSG00000063808	Gpatch1	98	76.042	ENSSDUG00000007444	gpatch1	93	49.629	Seriola_dumerili
ENSMUSG00000063808	Gpatch1	98	76.042	ENSSLDG00000002856	gpatch1	89	51.861	Seriola_lalandi_dorsalis
ENSMUSG00000063808	Gpatch1	100	90.816	ENSSARG00000004108	GPATCH1	72	81.306	Sorex_araneus
ENSMUSG00000063808	Gpatch1	92	80.000	ENSSPUG00000013348	-	94	75.709	Sphenodon_punctatus
ENSMUSG00000063808	Gpatch1	98	78.125	ENSSPAG00000022432	-	86	76.471	Stegastes_partitus
ENSMUSG00000063808	Gpatch1	100	94.898	ENSSSCG00000002865	GPATCH1	96	85.284	Sus_scrofa
ENSMUSG00000063808	Gpatch1	100	75.758	ENSTGUG00000009401	GPATCH1	94	63.176	Taeniopygia_guttata
ENSMUSG00000063808	Gpatch1	98	72.917	ENSTRUG00000025081	gpatch1	93	49.264	Takifugu_rubripes
ENSMUSG00000063808	Gpatch1	98	72.917	ENSTRUG00000005785	-	93	49.264	Takifugu_rubripes
ENSMUSG00000063808	Gpatch1	98	73.469	ENSTNIG00000002554	gpatch1	97	53.411	Tetraodon_nigroviridis
ENSMUSG00000063808	Gpatch1	74	98.630	ENSTBEG00000007750	-	82	73.775	Tupaia_belangeri
ENSMUSG00000063808	Gpatch1	100	90.816	ENSTTRG00000012221	GPATCH1	100	77.195	Tursiops_truncatus
ENSMUSG00000063808	Gpatch1	100	95.918	ENSUAMG00000015638	-	74	95.918	Ursus_americanus
ENSMUSG00000063808	Gpatch1	100	95.918	ENSUMAG00000014645	GPATCH1	100	83.055	Ursus_maritimus
ENSMUSG00000063808	Gpatch1	100	93.878	ENSVPAG00000010313	GPATCH1	87	94.022	Vicugna_pacos
ENSMUSG00000063808	Gpatch1	100	93.878	ENSVVUG00000016572	GPATCH1	93	84.028	Vulpes_vulpes
ENSMUSG00000063808	Gpatch1	99	51.001	ENSXETG00000018276	gpatch1	100	50.581	Xenopus_tropicalis
ENSMUSG00000063808	Gpatch1	97	74.737	ENSXCOG00000009851	-	69	74.737	Xiphophorus_couchianus
ENSMUSG00000063808	Gpatch1	97	74.737	ENSXMAG00000018182	-	71	74.737	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008150	biological_process	-	ND	Process
GO:0071013	catalytic step 2 spliceosome	-	ISO	Component