EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000063919 (Gene tree)
Gene ID: 68955
Gene Symbol: Srrm4
Alias: 1500001A10Rik|B230202K19Rik|bv|flopsy|fp|nSR100
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 152543 bases
Position: chr5:116439275-116591817
Accession: 1916205
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000075488	SRRM_C	PF15230.6	2.9e-24	1	1
ENSMUSP00000144367	SRRM_C	PF15230.6	5e-16	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000150127	-	6555	-	-	- (aa)	-	-
ENSMUST00000201430	-	779	-	-	- (aa)	-	-
ENSMUST00000139425	-	2798	-	ENSMUSP00000144367	120 (aa)	-	Q8BKA3
ENSMUST00000222119	-	682	-	ENSMUSP00000152054	66 (aa)	-	A0A1Y7VIM4
ENSMUST00000076124	-	7472	XM_006530456	ENSMUSP00000075488	608 (aa)	XP_006530519	Q8BKA3

Gene Model

Click here to download ENSMUSG00000063919's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000063919's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000063919	Srrm4	85	85.824	ENSG00000139767	SRRM4	85	86.513	Homo_sapiens
ENSMUSG00000063919	Srrm4	79	80.498	ENSAMEG00000016072	SRRM4	88	83.058	Ailuropoda_melanoleuca
ENSMUSG00000063919	Srrm4	65	51.064	ENSAPLG00000009202	SRRM4	91	53.875	Anas_platyrhynchos
ENSMUSG00000063919	Srrm4	85	47.575	ENSACAG00000004139	SRRM4	87	51.028	Anolis_carolinensis
ENSMUSG00000063919	Srrm4	83	67.327	ENSANAG00000020333	SRRM4	83	66.534	Aotus_nancymaae
ENSMUSG00000063919	Srrm4	85	81.034	ENSBTAG00000008676	SRRM4	86	82.852	Bos_taurus
ENSMUSG00000063919	Srrm4	85	86.398	ENSCJAG00000009146	SRRM4	84	87.091	Callithrix_jacchus
ENSMUSG00000063919	Srrm4	85	82.885	ENSCAFG00000023113	SRRM4	85	84.971	Canis_familiaris
ENSMUSG00000063919	Srrm4	52	84.810	ENSCAFG00020018665	SRRM4	55	84.127	Canis_lupus_dingo
ENSMUSG00000063919	Srrm4	85	67.238	ENSCHIG00000019151	SRRM4	85	66.092	Capra_hircus
ENSMUSG00000063919	Srrm4	78	83.925	ENSTSYG00000012239	SRRM4	84	84.664	Carlito_syrichta
ENSMUSG00000063919	Srrm4	76	84.052	ENSCAPG00000008729	SRRM4	88	84.946	Cavia_aperea
ENSMUSG00000063919	Srrm4	85	85.029	ENSCPOG00000003544	SRRM4	85	85.714	Cavia_porcellus
ENSMUSG00000063919	Srrm4	85	85.824	ENSCCAG00000022479	SRRM4	85	86.513	Cebus_capucinus
ENSMUSG00000063919	Srrm4	85	85.632	ENSCATG00000036343	SRRM4	85	86.320	Cercocebus_atys
ENSMUSG00000063919	Srrm4	85	86.154	ENSCLAG00000009764	SRRM4	85	86.873	Chinchilla_lanigera
ENSMUSG00000063919	Srrm4	85	85.441	ENSCSAG00000002300	SRRM4	85	86.127	Chlorocebus_sabaeus
ENSMUSG00000063919	Srrm4	52	59.531	ENSCPBG00000012293	SRRM4	87	61.765	Chrysemys_picta_bellii
ENSMUSG00000063919	Srrm4	85	82.500	ENSCANG00000031719	SRRM4	85	82.979	Colobus_angolensis_palliatus
ENSMUSG00000063919	Srrm4	85	90.891	ENSCGRG00001000544	Srrm4	85	93.592	Cricetulus_griseus_chok1gshd
ENSMUSG00000063919	Srrm4	85	85.907	ENSCGRG00000006973	Srrm4	84	85.825	Cricetulus_griseus_crigri
ENSMUSG00000063919	Srrm4	85	81.836	ENSDNOG00000000260	SRRM4	87	82.239	Dasypus_novemcinctus
ENSMUSG00000063919	Srrm4	85	76.392	ENSDORG00000015243	Srrm4	87	76.209	Dipodomys_ordii
ENSMUSG00000063919	Srrm4	84	82.205	ENSEASG00005008759	SRRM4	86	83.622	Equus_asinus_asinus
ENSMUSG00000063919	Srrm4	84	82.205	ENSECAG00000021729	SRRM4	86	83.622	Equus_caballus
ENSMUSG00000063919	Srrm4	84	85.687	ENSFCAG00000010536	SRRM4	83	86.513	Felis_catus
ENSMUSG00000063919	Srrm4	84	83.172	ENSFDAG00000007218	SRRM4	85	83.430	Fukomys_damarensis
ENSMUSG00000063919	Srrm4	85	86.015	ENSGGOG00000005338	SRRM4	85	86.705	Gorilla_gorilla
ENSMUSG00000063919	Srrm4	85	83.012	ENSHGLG00000007830	SRRM4	86	84.971	Heterocephalus_glaber_female
ENSMUSG00000063919	Srrm4	51	80.317	ENSHGLG00100008549	SRRM4	90	73.402	Heterocephalus_glaber_male
ENSMUSG00000063919	Srrm4	78	75.000	ENSSTOG00000026642	SRRM4	82	75.105	Ictidomys_tridecemlineatus
ENSMUSG00000063919	Srrm4	82	77.291	ENSJJAG00000016448	Srrm4	81	82.353	Jaculus_jaculus
ENSMUSG00000063919	Srrm4	85	85.078	ENSLAFG00000003731	SRRM4	84	84.139	Loxodonta_africana
ENSMUSG00000063919	Srrm4	85	85.632	ENSMFAG00000041271	SRRM4	84	86.320	Macaca_fascicularis
ENSMUSG00000063919	Srrm4	84	72.447	ENSMMUG00000021230	SRRM4	67	76.429	Macaca_mulatta
ENSMUSG00000063919	Srrm4	85	85.441	ENSMNEG00000044154	SRRM4	84	86.127	Macaca_nemestrina
ENSMUSG00000063919	Srrm4	85	85.824	ENSMLEG00000034455	SRRM4	84	86.513	Mandrillus_leucophaeus
ENSMUSG00000063919	Srrm4	84	59.023	ENSMGAG00000009082	SRRM4	87	60.487	Meleagris_gallopavo
ENSMUSG00000063919	Srrm4	85	90.116	ENSMAUG00000013203	Srrm4	86	92.816	Mesocricetus_auratus
ENSMUSG00000063919	Srrm4	85	85.057	ENSMICG00000012386	SRRM4	85	85.356	Microcebus_murinus
ENSMUSG00000063919	Srrm4	85	88.953	ENSMOCG00000006737	Srrm4	86	91.456	Microtus_ochrogaster
ENSMUSG00000063919	Srrm4	84	57.092	ENSMODG00000015283	SRRM4	86	54.626	Monodelphis_domestica
ENSMUSG00000063919	Srrm4	100	99.013	MGP_CAROLIEiJ_G0027638	Srrm4	100	99.013	Mus_caroli
ENSMUSG00000063919	Srrm4	100	96.053	MGP_PahariEiJ_G0024219	Srrm4	100	96.053	Mus_pahari
ENSMUSG00000063919	Srrm4	100	98.689	MGP_SPRETEiJ_G0028637	Srrm4	100	98.689	Mus_spretus
ENSMUSG00000063919	Srrm4	84	82.785	ENSMPUG00000002930	SRRM4	86	84.971	Mustela_putorius_furo
ENSMUSG00000063919	Srrm4	85	86.233	ENSNGAG00000020807	Srrm4	86	87.692	Nannospalax_galili
ENSMUSG00000063919	Srrm4	85	85.824	ENSNLEG00000000200	SRRM4	84	86.513	Nomascus_leucogenys
ENSMUSG00000063919	Srrm4	84	76.762	ENSOPRG00000016981	SRRM4	76	75.712	Ochotona_princeps
ENSMUSG00000063919	Srrm4	85	84.971	ENSODEG00000006291	SRRM4	85	85.714	Octodon_degus
ENSMUSG00000063919	Srrm4	84	84.556	ENSOCUG00000004503	SRRM4	77	83.077	Oryctolagus_cuniculus
ENSMUSG00000063919	Srrm4	85	84.674	ENSOGAG00000015431	SRRM4	85	85.356	Otolemur_garnettii
ENSMUSG00000063919	Srrm4	85	83.142	ENSOARG00000002063	SRRM4	86	84.008	Ovis_aries
ENSMUSG00000063919	Srrm4	78	85.356	ENSPPAG00000028134	SRRM4	83	86.105	Pan_paniscus
ENSMUSG00000063919	Srrm4	84	85.300	ENSPPRG00000002659	SRRM4	84	86.127	Panthera_pardus
ENSMUSG00000063919	Srrm4	85	86.015	ENSPTRG00000005517	SRRM4	85	86.705	Pan_troglodytes
ENSMUSG00000063919	Srrm4	85	85.632	ENSPANG00000022544	SRRM4	99	85.686	Papio_anubis
ENSMUSG00000063919	Srrm4	85	91.489	ENSPEMG00000001823	Srrm4	86	93.992	Peromyscus_maniculatus_bairdii
ENSMUSG00000063919	Srrm4	78	77.521	ENSPCAG00000016401	SRRM4	68	76.321	Procavia_capensis
ENSMUSG00000063919	Srrm4	85	85.632	ENSPCOG00000013803	SRRM4	86	86.320	Propithecus_coquereli
ENSMUSG00000063919	Srrm4	78	84.310	ENSPVAG00000017487	SRRM4	85	85.263	Pteropus_vampyrus
ENSMUSG00000063919	Srrm4	100	95.888	ENSRNOG00000001141	Srrm4	100	95.888	Rattus_norvegicus
ENSMUSG00000063919	Srrm4	55	85.207	ENSRBIG00000040107	SRRM4	80	74.262	Rhinopithecus_bieti
ENSMUSG00000063919	Srrm4	55	85.799	ENSRROG00000035868	SRRM4	80	74.473	Rhinopithecus_roxellana
ENSMUSG00000063919	Srrm4	85	78.736	ENSSBOG00000035310	SRRM4	85	78.998	Saimiri_boliviensis_boliviensis
ENSMUSG00000063919	Srrm4	78	65.932	ENSSHAG00000017330	SRRM4	87	61.771	Sarcophilus_harrisii
ENSMUSG00000063919	Srrm4	62	78.233	ENSSARG00000012647	SRRM4	83	65.684	Sorex_araneus
ENSMUSG00000063919	Srrm4	85	84.100	ENSSSCG00000009845	SRRM4	85	84.778	Sus_scrofa
ENSMUSG00000063919	Srrm4	63	54.707	ENSTGUG00000009228	SRRM4	91	55.431	Taeniopygia_guttata
ENSMUSG00000063919	Srrm4	76	86.207	ENSVPAG00000007937	SRRM4	71	84.733	Vicugna_pacos
ENSMUSG00000063919	Srrm4	62	47.757	ENSXETG00000019934	SRRM4	97	51.992	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	23055939.25727884.	IMP	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	19737518.	IDA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	19737518.	IDA	Component
GO:0006397	mRNA processing	21873635.	IBA	Process
GO:0006397	mRNA processing	19737518.	IDA	Process
GO:0007399	nervous system development	19737518.25838543.	IMP	Process
GO:0007605	sensory perception of sound	423972.	IMP	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0030154	cell differentiation	19737518.	IMP	Process
GO:0042551	neuron maturation	21873635.	IBA	Process
GO:0043484	regulation of RNA splicing	21873635.	IBA	Process
GO:0043484	regulation of RNA splicing	19737518.	IDA	Process