EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000064302 (Gene tree)
Gene ID: 76707
Gene Symbol: Clasp1
Alias: 1700030C23Rik|5730583A19Rik|B130045P17Rik|CLASP1|CLASP1alpha|mCLASP1
Full Name: CLIP associating protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 223621
Position: chr1: 118389058-118612678
Accession: 1923957
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000191823	-	3916	XM_017312819	ENSMUSP00000142203	1244 (aa)	-	A0A0A6YXZ1
ENSMUST00000178710	-	7566	XM_017312767	ENSMUSP00000137137	1459 (aa)	XP_017168256	J3QP81
ENSMUST00000187713	-	5367	-	ENSMUSP00000139526	1475 (aa)	-	A0A087WNW8
ENSMUST00000189216	-	825	-	-	- (aa)	-	-
ENSMUST00000203009	-	860	-	-	- (aa)	-	-
ENSMUST00000190571	-	7910	XM_017312724	ENSMUSP00000140019	1552 (aa)	XP_017168213	A0A087WQ31
ENSMUST00000189570	-	5502	XM_006529949	ENSMUSP00000140167	1468 (aa)	XP_006530012	A0A087WQF1
ENSMUST00000204886	-	546	-	-	- (aa)	-	-
ENSMUST00000189262	-	6918	-	ENSMUSP00000140860	1460 (aa)	-	A0A087WS18
ENSMUST00000204904	-	702	-	ENSMUSP00000145100	177 (aa)	-	A0A0N4SVH2
ENSMUST00000187575	-	4706	-	-	- (aa)	-	-
ENSMUST00000188441	-	514	-	-	- (aa)	-	-
ENSMUST00000204552	-	525	-	-	- (aa)	-	-
ENSMUST00000203870	-	2090	-	-	- (aa)	-	-
ENSMUST00000185405	-	4597	-	ENSMUSP00000139619	1492 (aa)	-	A0A087WP42
ENSMUST00000049404	-	7797	XM_006529924	ENSMUSP00000042266	1536 (aa)	XP_006529987	E9QKH0
ENSMUST00000205176	-	856	-	ENSMUSP00000144818	285 (aa)	-	A0A0N4SUT7
ENSMUST00000203646	-	4042	-	-	- (aa)	-	-
ENSMUST00000190733	-	4474	-	ENSMUSP00000140778	73 (aa)	-	A0A087WRU7
ENSMUST00000191445	-	4914	XM_006529943	ENSMUSP00000140095	1469 (aa)	XP_006530006	A0A087WQ95
ENSMUST00000204325	-	4301	-	ENSMUSP00000144798	4 (aa)	-	UPI0006A69F45
ENSMUST00000189738	-	5373	XM_006529942	ENSMUSP00000140665	1477 (aa)	XP_006530005	A0A087WRK0
ENSMUST00000190135	-	3829	-	-	- (aa)	-	-
ENSMUST00000189676	-	1855	-	-	- (aa)	-	-
ENSMUST00000186349	-	7281	-	ENSMUSP00000141105	1536 (aa)	-	E9QKH0
ENSMUST00000192387	-	1034	-	ENSMUSP00000141582	345 (aa)	-	A0A0A6YWK1
ENSMUST00000188710	-	10265	XM_006529920	ENSMUSP00000140593	1526 (aa)	XP_006529983	A0A087WRE8
ENSMUST00000189384	-	2725	-	-	- (aa)	-	-
ENSMUST00000070989	-	7767	-	ENSMUSP00000067858	1526 (aa)	-	E9QNY9
ENSMUST00000165223	-	7207	-	ENSMUSP00000128089	1452 (aa)	-	E9Q6L0

Gene Model

Click here to download ENSMUSG00000064302's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000064302's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000064302	Clasp1	100	97.905	ENSG00000074054	CLASP1	100	97.905	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000226	microtubule cytoskeleton organization	-	ISO	Process
GO:0000775	chromosome, centromeric region	-	IEA	Component
GO:0000776	kinetochore	-	ISO	Component
GO:0001578	microtubule bundle formation	-	ISO	Process
GO:0002162	dystroglycan binding	-	ISO	Function
GO:0005515	protein binding	11290329.18854161.	IPI	Function
GO:0005694	chromosome	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0005813	centrosome	-	ISO	Component
GO:0005828	kinetochore microtubule	-	IEA	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005874	microtubule	-	IEA	Component
GO:0005876	spindle microtubule	-	ISO	Component
GO:0005881	cytoplasmic microtubule	11290329.	IDA	Component
GO:0005881	cytoplasmic microtubule	-	ISO	Component
GO:0005925	focal adhesion	-	ISO	Component
GO:0005938	cell cortex	-	ISO	Component
GO:0006903	vesicle targeting	-	ISO	Process
GO:0007020	microtubule nucleation	-	ISO	Process
GO:0007026	negative regulation of microtubule depolymerization	11290329.	IDA	Process
GO:0007026	negative regulation of microtubule depolymerization	-	ISO	Process
GO:0007030	Golgi organization	-	ISO	Process
GO:0007049	cell cycle	-	IEA	Process
GO:0007052	mitotic spindle organization	-	ISO	Process
GO:0008017	microtubule binding	11290329.	IDA	Function
GO:0008017	microtubule binding	-	ISO	Function
GO:0010458	exit from mitosis	-	ISO	Process
GO:0010470	regulation of gastrulation	-	ISO	Process
GO:0010634	positive regulation of epithelial cell migration	-	ISO	Process
GO:0010717	regulation of epithelial to mesenchymal transition	-	ISO	Process
GO:0030953	astral microtubule organization	-	ISO	Process
GO:0030981	cortical microtubule cytoskeleton	-	ISO	Component
GO:0031023	microtubule organizing center organization	-	ISO	Process
GO:0031111	negative regulation of microtubule polymerization or depolymerization	-	ISO	Process
GO:0031592	centrosomal corona	-	ISO	Component
GO:0034453	microtubule anchoring	-	ISO	Process
GO:0040001	establishment of mitotic spindle localization	-	ISO	Process
GO:0043515	kinetochore binding	-	ISO	Function
GO:0045180	basal cortex	-	ISO	Component
GO:0045921	positive regulation of exocytosis	-	ISO	Process
GO:0051010	microtubule plus-end binding	-	ISO	Function
GO:0051294	establishment of spindle orientation	21822276.	ISO	Process
GO:0051301	cell division	21822276.	ISO	Process
GO:0051497	negative regulation of stress fiber assembly	-	ISO	Process
GO:0051893	regulation of focal adhesion assembly	-	ISO	Process
GO:0070507	regulation of microtubule cytoskeleton organization	-	ISO	Process
GO:0090091	positive regulation of extracellular matrix disassembly	-	ISO	Process
GO:1903690	negative regulation of wound healing, spreading of epidermal cells	-	ISO	Process
GO:1904261	positive regulation of basement membrane assembly involved in embryonic body morphogenesis	-	ISO	Process