EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000066232 (Gene tree)
Gene ID: 233726
Gene Symbol: Ipo7
Alias: A330055O14Rik|Imp7|RanBP7
Full Name: importin 7
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 38336 bases
Position: chr7:110018274-110056609
Accession: 2152414
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000081782	IBN_N	PF03810.19	3.1e-22	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000207277	-	3784	-	-	- (aa)	-	-
ENSMUST00000208821	-	3867	-	-	- (aa)	-	-
ENSMUST00000084731	-	4763	XM_006507657	ENSMUSP00000081782	1038 (aa)	-	Q9EPL8
ENSMUST00000208951	-	1883	-	ENSMUSP00000146367	70 (aa)	-	A0A140LHD0
ENSMUST00000208408	-	4159	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000066232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000066232's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000066232	Ipo7	97	63.754	ENSMUSG00000040029	Ipo8	99	63.654

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000066232	Ipo7	100	99.422	ENSG00000205339	IPO7	100	99.422	Homo_sapiens
ENSMUSG00000066232	Ipo7	100	86.429	ENSAPOG00000014238	ipo7	100	86.622	Acanthochromis_polyacanthus
ENSMUSG00000066232	Ipo7	100	99.038	ENSAMEG00000003914	IPO7	100	99.038	Ailuropoda_melanoleuca
ENSMUSG00000066232	Ipo7	100	81.792	ENSACIG00000000608	ipo7	100	81.923	Amphilophus_citrinellus
ENSMUSG00000066232	Ipo7	77	77.778	ENSAOCG00000015664	-	93	78.571	Amphiprion_ocellaris
ENSMUSG00000066232	Ipo7	100	86.718	ENSAOCG00000009342	ipo7	100	86.910	Amphiprion_ocellaris
ENSMUSG00000066232	Ipo7	100	86.718	ENSAPEG00000009820	ipo7	100	86.910	Amphiprion_percula
ENSMUSG00000066232	Ipo7	100	85.371	ENSATEG00000006501	ipo7	100	85.467	Anabas_testudineus
ENSMUSG00000066232	Ipo7	97	95.949	ENSAPLG00000016161	IPO7	100	95.850	Anas_platyrhynchos
ENSMUSG00000066232	Ipo7	100	96.724	ENSACAG00000009452	IPO7	100	96.724	Anolis_carolinensis
ENSMUSG00000066232	Ipo7	100	99.518	ENSANAG00000037854	IPO7	100	99.518	Aotus_nancymaae
ENSMUSG00000066232	Ipo7	59	78.489	ENSACLG00000026148	-	87	78.489	Astatotilapia_calliptera
ENSMUSG00000066232	Ipo7	100	85.852	ENSACLG00000027247	ipo7	100	86.333	Astatotilapia_calliptera
ENSMUSG00000066232	Ipo7	100	79.079	ENSAMXG00000009895	ipo7	100	78.311	Astyanax_mexicanus
ENSMUSG00000066232	Ipo7	100	99.326	ENSBTAG00000027722	IPO7	100	99.326	Bos_taurus
ENSMUSG00000066232	Ipo7	100	99.422	ENSCJAG00000011395	IPO7	100	99.422	Callithrix_jacchus
ENSMUSG00000066232	Ipo7	100	99.422	ENSCAFG00000007259	IPO7	100	99.422	Canis_familiaris
ENSMUSG00000066232	Ipo7	96	99.397	ENSCAFG00020011426	IPO7	100	99.397	Canis_lupus_dingo
ENSMUSG00000066232	Ipo7	100	99.133	ENSCHIG00000024527	IPO7	100	99.133	Capra_hircus
ENSMUSG00000066232	Ipo7	100	99.133	ENSTSYG00000004959	IPO7	100	99.133	Carlito_syrichta
ENSMUSG00000066232	Ipo7	100	99.422	ENSCPOG00000013623	IPO7	100	99.422	Cavia_porcellus
ENSMUSG00000066232	Ipo7	96	96.761	ENSCCAG00000020955	IPO7	100	96.761	Cebus_capucinus
ENSMUSG00000066232	Ipo7	100	91.908	ENSCATG00000042452	IPO7	100	92.004	Cercocebus_atys
ENSMUSG00000066232	Ipo7	100	99.133	ENSCLAG00000015913	IPO7	100	99.133	Chinchilla_lanigera
ENSMUSG00000066232	Ipo7	100	99.422	ENSCSAG00000004504	IPO7	100	99.422	Chlorocebus_sabaeus
ENSMUSG00000066232	Ipo7	100	97.881	ENSCPBG00000022842	IPO7	98	97.881	Chrysemys_picta_bellii
ENSMUSG00000066232	Ipo7	98	51.951	ENSCING00000008592	-	99	51.546	Ciona_intestinalis
ENSMUSG00000066232	Ipo7	99	55.449	ENSCSAVG00000011751	-	99	55.641	Ciona_savignyi
ENSMUSG00000066232	Ipo7	100	98.881	ENSCANG00000032804	IPO7	100	98.881	Colobus_angolensis_palliatus
ENSMUSG00000066232	Ipo7	100	99.711	ENSCGRG00001019770	Ipo7	100	99.711	Cricetulus_griseus_chok1gshd
ENSMUSG00000066232	Ipo7	100	99.711	ENSCGRG00000016689	Ipo7	100	99.711	Cricetulus_griseus_crigri
ENSMUSG00000066232	Ipo7	100	85.948	ENSCSEG00000009451	ipo7	100	86.044	Cynoglossus_semilaevis
ENSMUSG00000066232	Ipo7	100	85.563	ENSCVAG00000017260	ipo7	100	85.659	Cyprinodon_variegatus
ENSMUSG00000066232	Ipo7	100	84.889	ENSDARG00000035751	ipo7	100	85.082	Danio_rerio
ENSMUSG00000066232	Ipo7	100	99.229	ENSDNOG00000016138	IPO7	100	99.229	Dasypus_novemcinctus
ENSMUSG00000066232	Ipo7	100	99.422	ENSDORG00000013699	Ipo7	100	99.422	Dipodomys_ordii
ENSMUSG00000066232	Ipo7	99	53.264	FBgn0026252	msk	100	53.169	Drosophila_melanogaster
ENSMUSG00000066232	Ipo7	92	94.064	ENSETEG00000001023	IPO7	92	94.064	Echinops_telfairi
ENSMUSG00000066232	Ipo7	89	67.682	ENSEBUG00000016040	-	99	67.869	Eptatretus_burgeri
ENSMUSG00000066232	Ipo7	100	63.916	ENSEBUG00000003477	ipo7	100	63.724	Eptatretus_burgeri
ENSMUSG00000066232	Ipo7	96	98.995	ENSEASG00005003575	IPO7	100	98.995	Equus_asinus_asinus
ENSMUSG00000066232	Ipo7	100	99.229	ENSECAG00000015965	IPO7	100	99.229	Equus_caballus
ENSMUSG00000066232	Ipo7	85	98.681	ENSEEUG00000014059	IPO7	85	98.681	Erinaceus_europaeus
ENSMUSG00000066232	Ipo7	100	86.622	ENSELUG00000007853	ipo7	100	86.622	Esox_lucius
ENSMUSG00000066232	Ipo7	100	99.422	ENSFCAG00000030327	IPO7	100	99.422	Felis_catus
ENSMUSG00000066232	Ipo7	96	96.683	ENSFALG00000000979	IPO7	100	96.683	Ficedula_albicollis
ENSMUSG00000066232	Ipo7	100	98.748	ENSFDAG00000011342	IPO7	100	98.748	Fukomys_damarensis
ENSMUSG00000066232	Ipo7	98	81.836	ENSFHEG00000007582	ipo7	99	81.935	Fundulus_heteroclitus
ENSMUSG00000066232	Ipo7	89	87.057	ENSGMOG00000001681	ipo7	98	87.057	Gadus_morhua
ENSMUSG00000066232	Ipo7	100	97.206	ENSGALG00000005807	IPO7	100	97.206	Gallus_gallus
ENSMUSG00000066232	Ipo7	100	85.659	ENSGAFG00000017037	ipo7	100	85.852	Gambusia_affinis
ENSMUSG00000066232	Ipo7	100	86.429	ENSGACG00000015677	ipo7	100	86.333	Gasterosteus_aculeatus
ENSMUSG00000066232	Ipo7	100	97.592	ENSGAGG00000020412	IPO7	98	97.592	Gopherus_agassizii
ENSMUSG00000066232	Ipo7	100	88.571	ENSGGOG00000026484	-	100	88.571	Gorilla_gorilla
ENSMUSG00000066232	Ipo7	99	98.729	ENSGGOG00000002260	IPO7	100	99.406	Gorilla_gorilla
ENSMUSG00000066232	Ipo7	100	85.948	ENSHBUG00000017323	ipo7	100	86.429	Haplochromis_burtoni
ENSMUSG00000066232	Ipo7	100	99.326	ENSHGLG00000005147	IPO7	100	99.326	Heterocephalus_glaber_female
ENSMUSG00000066232	Ipo7	100	70.231	ENSHGLG00000000256	-	100	68.607	Heterocephalus_glaber_female
ENSMUSG00000066232	Ipo7	97	99.304	ENSHGLG00100013871	IPO7	99	99.304	Heterocephalus_glaber_male
ENSMUSG00000066232	Ipo7	100	70.039	ENSHGLG00100017940	-	100	68.416	Heterocephalus_glaber_male
ENSMUSG00000066232	Ipo7	100	85.178	ENSHCOG00000002290	ipo7	100	84.986	Hippocampus_comes
ENSMUSG00000066232	Ipo7	100	85.659	ENSIPUG00000020136	ipo7	100	85.852	Ictalurus_punctatus
ENSMUSG00000066232	Ipo7	100	99.229	ENSSTOG00000009601	IPO7	100	99.229	Ictidomys_tridecemlineatus
ENSMUSG00000066232	Ipo7	100	94.321	ENSJJAG00000018743	Ipo7	100	94.321	Jaculus_jaculus
ENSMUSG00000066232	Ipo7	100	84.312	ENSKMAG00000004961	ipo7	100	84.697	Kryptolebias_marmoratus
ENSMUSG00000066232	Ipo7	100	86.237	ENSLBEG00000027402	ipo7	100	86.429	Labrus_bergylta
ENSMUSG00000066232	Ipo7	100	91.058	ENSLACG00000017593	IPO7	100	91.058	Latimeria_chalumnae
ENSMUSG00000066232	Ipo7	100	89.327	ENSLOCG00000003606	ipo7	100	89.327	Lepisosteus_oculatus
ENSMUSG00000066232	Ipo7	100	98.940	ENSLAFG00000014194	IPO7	100	98.940	Loxodonta_africana
ENSMUSG00000066232	Ipo7	100	89.017	ENSMFAG00000040326	IPO7	100	89.210	Macaca_fascicularis
ENSMUSG00000066232	Ipo7	100	91.627	ENSMMUG00000023636	IPO7	100	91.627	Macaca_mulatta
ENSMUSG00000066232	Ipo7	100	99.422	ENSMNEG00000034866	IPO7	100	99.422	Macaca_nemestrina
ENSMUSG00000066232	Ipo7	100	99.422	ENSMLEG00000043163	IPO7	100	99.422	Mandrillus_leucophaeus
ENSMUSG00000066232	Ipo7	100	85.756	ENSMAMG00000021798	ipo7	100	85.948	Mastacembelus_armatus
ENSMUSG00000066232	Ipo7	100	85.852	ENSMZEG00005015042	ipo7	100	86.333	Maylandia_zebra
ENSMUSG00000066232	Ipo7	97	96.841	ENSMGAG00000006243	IPO7	97	96.841	Meleagris_gallopavo
ENSMUSG00000066232	Ipo7	86	95.387	ENSMAUG00000014758	Ipo7	96	95.387	Mesocricetus_auratus
ENSMUSG00000066232	Ipo7	100	99.326	ENSMICG00000007465	IPO7	100	99.326	Microcebus_murinus
ENSMUSG00000066232	Ipo7	100	99.711	ENSMOCG00000005483	Ipo7	100	99.711	Microtus_ochrogaster
ENSMUSG00000066232	Ipo7	100	82.868	ENSMMOG00000017072	ipo7	100	83.253	Mola_mola
ENSMUSG00000066232	Ipo7	100	97.881	ENSMODG00000007836	IPO7	100	97.881	Monodelphis_domestica
ENSMUSG00000066232	Ipo7	97	86.892	ENSMALG00000020135	ipo7	99	86.991	Monopterus_albus
ENSMUSG00000066232	Ipo7	100	99.422	ENSMPUG00000012785	IPO7	100	99.422	Mustela_putorius_furo
ENSMUSG00000066232	Ipo7	100	98.079	ENSMLUG00000027687	IPO7	100	98.079	Myotis_lucifugus
ENSMUSG00000066232	Ipo7	100	96.628	ENSNGAG00000006507	Ipo7	100	96.628	Nannospalax_galili
ENSMUSG00000066232	Ipo7	100	99.422	ENSNLEG00000017560	IPO7	100	99.422	Nomascus_leucogenys
ENSMUSG00000066232	Ipo7	84	97.241	ENSMEUG00000001986	IPO7	88	97.241	Notamacropus_eugenii
ENSMUSG00000066232	Ipo7	97	96.238	ENSOPRG00000005430	IPO7	100	96.238	Ochotona_princeps
ENSMUSG00000066232	Ipo7	100	93.948	ENSODEG00000008218	IPO7	100	93.756	Octodon_degus
ENSMUSG00000066232	Ipo7	100	85.659	ENSONIG00000006069	ipo7	100	86.237	Oreochromis_niloticus
ENSMUSG00000066232	Ipo7	77	98.148	ENSOANG00000030525	-	91	96.250	Ornithorhynchus_anatinus
ENSMUSG00000066232	Ipo7	100	99.133	ENSOCUG00000007093	-	100	99.133	Oryctolagus_cuniculus
ENSMUSG00000066232	Ipo7	100	83.190	ENSOCUG00000000045	-	100	83.190	Oryctolagus_cuniculus
ENSMUSG00000066232	Ipo7	100	86.429	ENSORLG00000007093	ipo7	100	86.141	Oryzias_latipes
ENSMUSG00000066232	Ipo7	100	86.622	ENSORLG00020011226	ipo7	100	86.333	Oryzias_latipes_hni
ENSMUSG00000066232	Ipo7	100	86.814	ENSORLG00015009331	ipo7	100	86.526	Oryzias_latipes_hsok
ENSMUSG00000066232	Ipo7	97	86.364	ENSOMEG00000001444	ipo7	97	86.858	Oryzias_melastigma
ENSMUSG00000066232	Ipo7	100	99.229	ENSOGAG00000011507	IPO7	100	99.229	Otolemur_garnettii
ENSMUSG00000066232	Ipo7	100	99.229	ENSOARG00000012687	IPO7	100	99.229	Ovis_aries
ENSMUSG00000066232	Ipo7	100	99.422	ENSPPAG00000039367	IPO7	100	99.422	Pan_paniscus
ENSMUSG00000066232	Ipo7	100	90.000	ENSPPAG00000042260	-	100	90.000	Pan_paniscus
ENSMUSG00000066232	Ipo7	100	99.422	ENSPPRG00000013728	IPO7	100	99.422	Panthera_pardus
ENSMUSG00000066232	Ipo7	100	99.326	ENSPTIG00000011093	IPO7	100	99.326	Panthera_tigris_altaica
ENSMUSG00000066232	Ipo7	100	90.000	ENSPTRG00000044803	-	100	90.000	Pan_troglodytes
ENSMUSG00000066232	Ipo7	100	99.326	ENSPTRG00000028713	IPO7	100	99.326	Pan_troglodytes
ENSMUSG00000066232	Ipo7	100	99.422	ENSPANG00000017378	IPO7	100	99.422	Papio_anubis
ENSMUSG00000066232	Ipo7	100	87.007	ENSPKIG00000022252	ipo7	100	87.103	Paramormyrops_kingsleyae
ENSMUSG00000066232	Ipo7	97	97.332	ENSPSIG00000006313	IPO7	100	97.332	Pelodiscus_sinensis
ENSMUSG00000066232	Ipo7	100	99.422	ENSPEMG00000005751	Ipo7	100	99.422	Peromyscus_maniculatus_bairdii
ENSMUSG00000066232	Ipo7	100	97.881	ENSPCIG00000005946	IPO7	100	97.881	Phascolarctos_cinereus
ENSMUSG00000066232	Ipo7	100	85.852	ENSPFOG00000009302	ipo7	100	86.237	Poecilia_formosa
ENSMUSG00000066232	Ipo7	100	85.756	ENSPLAG00000014371	ipo7	100	86.141	Poecilia_latipinna
ENSMUSG00000066232	Ipo7	100	85.852	ENSPMEG00000002604	ipo7	100	86.237	Poecilia_mexicana
ENSMUSG00000066232	Ipo7	100	86.141	ENSPREG00000023089	ipo7	100	86.333	Poecilia_reticulata
ENSMUSG00000066232	Ipo7	82	99.180	ENSPCAG00000007493	IPO7	82	99.180	Procavia_capensis
ENSMUSG00000066232	Ipo7	79	98.962	ENSPVAG00000013029	IPO7	79	98.962	Pteropus_vampyrus
ENSMUSG00000066232	Ipo7	100	85.756	ENSPNYG00000008534	ipo7	100	86.237	Pundamilia_nyererei
ENSMUSG00000066232	Ipo7	100	86.910	ENSPNAG00000028115	ipo7	100	87.103	Pygocentrus_nattereri
ENSMUSG00000066232	Ipo7	100	99.807	ENSRNOG00000010427	Ipo7	100	99.807	Rattus_norvegicus
ENSMUSG00000066232	Ipo7	100	99.422	ENSRBIG00000031871	IPO7	100	99.422	Rhinopithecus_bieti
ENSMUSG00000066232	Ipo7	100	99.422	ENSRROG00000031816	IPO7	100	99.422	Rhinopithecus_roxellana
ENSMUSG00000066232	Ipo7	99	94.849	ENSSBOG00000029640	IPO7	100	95.644	Saimiri_boliviensis_boliviensis
ENSMUSG00000066232	Ipo7	100	86.237	ENSSFOG00015013937	ipo7	100	86.333	Scleropages_formosus
ENSMUSG00000066232	Ipo7	100	85.962	ENSSMAG00000021418	ipo7	100	86.250	Scophthalmus_maximus
ENSMUSG00000066232	Ipo7	100	86.718	ENSSDUG00000000611	ipo7	100	86.910	Seriola_dumerili
ENSMUSG00000066232	Ipo7	100	86.718	ENSSLDG00000021417	ipo7	100	86.910	Seriola_lalandi_dorsalis
ENSMUSG00000066232	Ipo7	100	85.192	ENSSARG00000005190	IPO7	94	96.721	Sorex_araneus
ENSMUSG00000066232	Ipo7	100	91.426	ENSSPUG00000014319	IPO7	100	91.426	Sphenodon_punctatus
ENSMUSG00000066232	Ipo7	100	86.814	ENSSPAG00000020296	ipo7	100	87.007	Stegastes_partitus
ENSMUSG00000066232	Ipo7	100	99.326	ENSSSCG00000028886	IPO7	100	99.326	Sus_scrofa
ENSMUSG00000066232	Ipo7	97	96.542	ENSTGUG00000008189	IPO7	100	96.542	Taeniopygia_guttata
ENSMUSG00000066232	Ipo7	100	84.312	ENSTRUG00000017414	ipo7	100	84.504	Takifugu_rubripes
ENSMUSG00000066232	Ipo7	100	85.207	ENSTNIG00000009369	ipo7	100	85.207	Tetraodon_nigroviridis
ENSMUSG00000066232	Ipo7	100	96.339	ENSTTRG00000015352	IPO7	100	96.339	Tursiops_truncatus
ENSMUSG00000066232	Ipo7	100	98.845	ENSUAMG00000001673	IPO7	100	98.845	Ursus_americanus
ENSMUSG00000066232	Ipo7	100	99.326	ENSUMAG00000012870	IPO7	100	99.326	Ursus_maritimus
ENSMUSG00000066232	Ipo7	100	97.977	ENSVPAG00000003917	IPO7	100	97.977	Vicugna_pacos
ENSMUSG00000066232	Ipo7	100	99.133	ENSVVUG00000025822	IPO7	100	99.133	Vulpes_vulpes
ENSMUSG00000066232	Ipo7	99	92.571	ENSVVUG00000013293	-	100	92.571	Vulpes_vulpes
ENSMUSG00000066232	Ipo7	100	91.242	ENSXETG00000024201	ipo7	100	91.242	Xenopus_tropicalis
ENSMUSG00000066232	Ipo7	100	79.596	ENSXCOG00000011269	ipo7	100	79.788	Xiphophorus_couchianus
ENSMUSG00000066232	Ipo7	100	85.852	ENSXMAG00000009410	ipo7	100	86.044	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	10891500.23055941.	IPI	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005635	nuclear envelope	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006606	protein import into nucleus	21873635.	IBA	Process
GO:0006606	protein import into nucleus	11493596.	IDA	Process
GO:0006886	intracellular protein transport	-	IEA	Process
GO:0008536	Ran GTPase binding	-	IEA	Function
GO:0008565	protein transporter activity	21873635.	IBA	Function
GO:0042393	histone binding	11493596.	IDA	Function
GO:0045087	innate immune response	19805818.	IMP	Process
GO:0046332	SMAD binding	-	ISO	Function