EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000067873 (Gene tree)
Gene ID: 72459
Gene Symbol: Htatsf1
Alias: 1600023H17Rik|2600017A12Rik|2700077B20Rik|TAT-SF1
Full Name: HIV TAT specific factor 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 13601 bases
Position: chrX:57053583-57067183
Accession: 1919709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000086027	RRM_1	PF00076.22	5.6e-16	1	2
ENSMUSP00000086027	RRM_1	PF00076.22	5.6e-16	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000114751	-	1128	-	ENSMUSP00000110399	195 (aa)	-	Q8BGC0
ENSMUST00000088652	-	2810	-	ENSMUSP00000086027	757 (aa)	-	Q8BGC0
ENSMUST00000134785	-	2664	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000067873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000067873's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000067873	Htatsf1	99	74.016	ENSG00000102241	HTATSF1	100	86.939	Homo_sapiens
ENSMUSG00000067873	Htatsf1	50	64.267	ENSAPOG00000009823	htatsf1	81	63.784	Acanthochromis_polyacanthus
ENSMUSG00000067873	Htatsf1	99	72.716	ENSAMEG00000002921	HTATSF1	98	70.656	Ailuropoda_melanoleuca
ENSMUSG00000067873	Htatsf1	50	63.706	ENSAOCG00000020994	htatsf1	80	63.369	Amphiprion_ocellaris
ENSMUSG00000067873	Htatsf1	50	63.868	ENSAPEG00000016432	htatsf1	80	62.834	Amphiprion_percula
ENSMUSG00000067873	Htatsf1	95	65.337	ENSANAG00000027986	-	93	65.292	Aotus_nancymaae
ENSMUSG00000067873	Htatsf1	93	72.011	ENSANAG00000025458	-	96	72.198	Aotus_nancymaae
ENSMUSG00000067873	Htatsf1	50	64.467	ENSAMXG00000008387	htatsf1	79	64.000	Astyanax_mexicanus
ENSMUSG00000067873	Htatsf1	99	72.516	ENSBTAG00000055212	HTATSF1	98	72.585	Bos_taurus
ENSMUSG00000067873	Htatsf1	100	66.230	ENSBTAG00000032711	HTATSF1	98	69.385	Bos_taurus
ENSMUSG00000067873	Htatsf1	99	72.516	ENSBTAG00000054942	HTATSF1	98	72.585	Bos_taurus
ENSMUSG00000067873	Htatsf1	99	74.605	ENSCJAG00000003676	HTATSF1	97	74.592	Callithrix_jacchus
ENSMUSG00000067873	Htatsf1	99	74.413	ENSCAFG00000023294	HTATSF1	98	73.351	Canis_familiaris
ENSMUSG00000067873	Htatsf1	99	72.890	ENSCAFG00020024635	HTATSF1	98	71.835	Canis_lupus_dingo
ENSMUSG00000067873	Htatsf1	99	73.360	ENSCHIG00000000312	HTATSF1	98	73.307	Capra_hircus
ENSMUSG00000067873	Htatsf1	99	75.099	ENSTSYG00000028876	HTATSF1	98	76.032	Carlito_syrichta
ENSMUSG00000067873	Htatsf1	99	75.494	ENSCCAG00000022701	-	97	75.646	Cebus_capucinus
ENSMUSG00000067873	Htatsf1	99	70.812	ENSCCAG00000025329	-	97	71.973	Cebus_capucinus
ENSMUSG00000067873	Htatsf1	99	72.966	ENSCATG00000029963	HTATSF1	97	75.202	Cercocebus_atys
ENSMUSG00000067873	Htatsf1	99	69.948	ENSCLAG00000002718	HTATSF1	98	71.277	Chinchilla_lanigera
ENSMUSG00000067873	Htatsf1	99	73.097	ENSCSAG00000007505	HTATSF1	97	75.337	Chlorocebus_sabaeus
ENSMUSG00000067873	Htatsf1	50	70.207	ENSCPBG00000026092	HTATSF1	91	66.268	Chrysemys_picta_bellii
ENSMUSG00000067873	Htatsf1	99	72.966	ENSCANG00000028495	HTATSF1	97	75.202	Colobus_angolensis_palliatus
ENSMUSG00000067873	Htatsf1	99	80.873	ENSCGRG00001021602	Htatsf1	98	80.704	Cricetulus_griseus_chok1gshd
ENSMUSG00000067873	Htatsf1	91	75.000	ENSCGRG00000002085	Htatsf1	98	74.680	Cricetulus_griseus_crigri
ENSMUSG00000067873	Htatsf1	99	70.284	ENSDNOG00000002254	HTATSF1	98	72.273	Dasypus_novemcinctus
ENSMUSG00000067873	Htatsf1	90	43.786	ENSETEG00000006377	-	70	49.031	Echinops_telfairi
ENSMUSG00000067873	Htatsf1	81	74.961	ENSEASG00005003440	HTATSF1	98	71.798	Equus_asinus_asinus
ENSMUSG00000067873	Htatsf1	81	75.272	ENSECAG00000009156	HTATSF1	98	72.057	Equus_caballus
ENSMUSG00000067873	Htatsf1	99	61.677	ENSEEUG00000010668	HTATSF1	97	62.451	Erinaceus_europaeus
ENSMUSG00000067873	Htatsf1	100	73.256	ENSFCAG00000031924	HTATSF1	98	73.087	Felis_catus
ENSMUSG00000067873	Htatsf1	51	66.751	ENSFALG00000003728	HTATSF1	87	66.005	Ficedula_albicollis
ENSMUSG00000067873	Htatsf1	99	71.542	ENSFDAG00000008617	HTATSF1	98	71.979	Fukomys_damarensis
ENSMUSG00000067873	Htatsf1	50	67.183	ENSGALG00000006410	HTATSF1	84	67.183	Gallus_gallus
ENSMUSG00000067873	Htatsf1	99	73.885	ENSGGOG00000026072	HTATSF1	96	75.606	Gorilla_gorilla
ENSMUSG00000067873	Htatsf1	98	71.867	ENSHGLG00000005328	HTATSF1	98	71.979	Heterocephalus_glaber_female
ENSMUSG00000067873	Htatsf1	50	61.323	ENSHCOG00000009056	htatsf1	94	58.768	Hippocampus_comes
ENSMUSG00000067873	Htatsf1	50	64.116	ENSIPUG00000017828	htatsf1	76	64.167	Ictalurus_punctatus
ENSMUSG00000067873	Htatsf1	99	76.596	ENSSTOG00000012505	HTATSF1	97	75.913	Ictidomys_tridecemlineatus
ENSMUSG00000067873	Htatsf1	50	44.020	ENSLOCG00000015118	htatsf1	88	41.805	Lepisosteus_oculatus
ENSMUSG00000067873	Htatsf1	99	66.623	ENSLAFG00000014307	HTATSF1	89	74.472	Loxodonta_africana
ENSMUSG00000067873	Htatsf1	99	73.097	ENSMFAG00000044705	HTATSF1	97	75.337	Macaca_fascicularis
ENSMUSG00000067873	Htatsf1	99	72.835	ENSMMUG00000006450	HTATSF1	97	75.202	Macaca_mulatta
ENSMUSG00000067873	Htatsf1	99	69.548	ENSMNEG00000024084	HTATSF1	99	70.424	Macaca_nemestrina
ENSMUSG00000067873	Htatsf1	99	74.016	ENSMLEG00000035511	HTATSF1	97	75.202	Mandrillus_leucophaeus
ENSMUSG00000067873	Htatsf1	50	62.944	ENSMAMG00000021225	htatsf1	83	62.567	Mastacembelus_armatus
ENSMUSG00000067873	Htatsf1	99	81.447	ENSMAUG00000007235	Htatsf1	98	79.813	Mesocricetus_auratus
ENSMUSG00000067873	Htatsf1	99	74.349	ENSMICG00000009348	HTATSF1	98	74.702	Microcebus_murinus
ENSMUSG00000067873	Htatsf1	100	80.207	ENSMOCG00000023007	-	98	79.260	Microtus_ochrogaster
ENSMUSG00000067873	Htatsf1	99	78.562	ENSMOCG00000022370	-	94	76.383	Microtus_ochrogaster
ENSMUSG00000067873	Htatsf1	52	61.557	ENSMMOG00000011013	htatsf1	96	58.945	Mola_mola
ENSMUSG00000067873	Htatsf1	52	70.426	ENSMODG00000014087	-	87	70.101	Monodelphis_domestica
ENSMUSG00000067873	Htatsf1	54	58.237	ENSMALG00000019977	htatsf1	94	58.237	Monopterus_albus
ENSMUSG00000067873	Htatsf1	100	95.773	MGP_CAROLIEiJ_G0033094	Htatsf1	100	95.773	Mus_caroli
ENSMUSG00000067873	Htatsf1	100	99.207	MGP_SPRETEiJ_G0034249	Htatsf1	100	99.207	Mus_spretus
ENSMUSG00000067873	Htatsf1	99	71.574	ENSMPUG00000001901	HTATSF1	98	72.222	Mustela_putorius_furo
ENSMUSG00000067873	Htatsf1	99	65.912	ENSMLUG00000009234	-	97	65.013	Myotis_lucifugus
ENSMUSG00000067873	Htatsf1	99	68.668	ENSMLUG00000028418	-	98	67.984	Myotis_lucifugus
ENSMUSG00000067873	Htatsf1	98	80.888	ENSNGAG00000017831	Htatsf1	97	81.023	Nannospalax_galili
ENSMUSG00000067873	Htatsf1	99	73.298	ENSNLEG00000002746	HTATSF1	96	75.337	Nomascus_leucogenys
ENSMUSG00000067873	Htatsf1	99	73.333	ENSOCUG00000012570	HTATSF1	98	74.635	Oryctolagus_cuniculus
ENSMUSG00000067873	Htatsf1	52	62.044	ENSORLG00015002268	htatsf1	90	61.687	Oryzias_latipes_hsok
ENSMUSG00000067873	Htatsf1	98	72.691	ENSOGAG00000005565	HTATSF1	98	73.219	Otolemur_garnettii
ENSMUSG00000067873	Htatsf1	99	68.333	ENSOARG00000000481	-	98	68.693	Ovis_aries
ENSMUSG00000067873	Htatsf1	99	72.645	ENSOARG00000011215	-	98	72.585	Ovis_aries
ENSMUSG00000067873	Htatsf1	99	74.016	ENSPPAG00000024268	HTATSF1	96	75.741	Pan_paniscus
ENSMUSG00000067873	Htatsf1	100	73.438	ENSPPRG00000014209	HTATSF1	98	73.271	Panthera_pardus
ENSMUSG00000067873	Htatsf1	93	72.433	ENSPTIG00000016887	HTATSF1	94	72.143	Panthera_tigris_altaica
ENSMUSG00000067873	Htatsf1	99	74.016	ENSPTRG00000044591	HTATSF1	96	75.741	Pan_troglodytes
ENSMUSG00000067873	Htatsf1	99	63.255	ENSPANG00000010946	HTATSF1	96	63.941	Papio_anubis
ENSMUSG00000067873	Htatsf1	50	62.935	ENSPMGG00000006172	htatsf1	87	62.935	Periophthalmus_magnuspinnatus
ENSMUSG00000067873	Htatsf1	98	82.930	ENSPEMG00000022397	Htatsf1	98	82.661	Peromyscus_maniculatus_bairdii
ENSMUSG00000067873	Htatsf1	50	66.753	ENSPCIG00000018896	-	95	61.502	Phascolarctos_cinereus
ENSMUSG00000067873	Htatsf1	50	63.359	ENSPLAG00000007532	htatsf1	82	62.567	Poecilia_latipinna
ENSMUSG00000067873	Htatsf1	50	64.213	ENSPMEG00000000352	htatsf1	82	63.467	Poecilia_mexicana
ENSMUSG00000067873	Htatsf1	50	64.213	ENSPREG00000007811	htatsf1	82	63.467	Poecilia_reticulata
ENSMUSG00000067873	Htatsf1	81	78.240	ENSPPYG00000020765	HTATSF1	81	78.029	Pongo_abelii
ENSMUSG00000067873	Htatsf1	93	65.581	ENSPCAG00000010576	HTATSF1	83	67.267	Procavia_capensis
ENSMUSG00000067873	Htatsf1	99	75.750	ENSPCOG00000021823	HTATSF1	98	76.026	Propithecus_coquereli
ENSMUSG00000067873	Htatsf1	99	68.667	ENSPVAG00000010281	HTATSF1	88	69.712	Pteropus_vampyrus
ENSMUSG00000067873	Htatsf1	50	62.592	ENSPNAG00000006166	htatsf1	79	65.169	Pygocentrus_nattereri
ENSMUSG00000067873	Htatsf1	100	87.387	ENSRNOG00000027761	Htatsf1	98	87.122	Rattus_norvegicus
ENSMUSG00000067873	Htatsf1	99	63.386	ENSRBIG00000035486	HTATSF1	96	64.825	Rhinopithecus_bieti
ENSMUSG00000067873	Htatsf1	99	72.703	ENSRROG00000021939	HTATSF1	97	74.933	Rhinopithecus_roxellana
ENSMUSG00000067873	Htatsf1	99	73.740	ENSSBOG00000027186	-	97	74.528	Saimiri_boliviensis_boliviensis
ENSMUSG00000067873	Htatsf1	99	71.900	ENSSBOG00000017914	-	98	71.486	Saimiri_boliviensis_boliviensis
ENSMUSG00000067873	Htatsf1	50	70.079	ENSSHAG00000006440	-	99	69.072	Sarcophilus_harrisii
ENSMUSG00000067873	Htatsf1	50	63.802	ENSSFOG00015012002	htatsf1	82	63.802	Scleropages_formosus
ENSMUSG00000067873	Htatsf1	50	63.131	ENSSLDG00000016880	htatsf1	86	63.131	Seriola_lalandi_dorsalis
ENSMUSG00000067873	Htatsf1	99	60.634	ENSSARG00000005193	HTATSF1	78	69.031	Sorex_araneus
ENSMUSG00000067873	Htatsf1	50	66.667	ENSSPUG00000014767	HTATSF1	84	66.667	Sphenodon_punctatus
ENSMUSG00000067873	Htatsf1	99	66.184	ENSSSCG00000023062	HTATSF1	97	67.065	Sus_scrofa
ENSMUSG00000067873	Htatsf1	85	64.969	ENSTTRG00000002269	HTATSF1	92	64.892	Tursiops_truncatus
ENSMUSG00000067873	Htatsf1	99	74.089	ENSUAMG00000012048	HTATSF1	98	72.229	Ursus_americanus
ENSMUSG00000067873	Htatsf1	99	72.669	ENSUMAG00000010393	HTATSF1	98	71.300	Ursus_maritimus
ENSMUSG00000067873	Htatsf1	91	65.665	ENSVPAG00000004569	HTATSF1	98	65.123	Vicugna_pacos
ENSMUSG00000067873	Htatsf1	99	72.716	ENSVVUG00000024802	HTATSF1	98	71.447	Vulpes_vulpes
ENSMUSG00000067873	Htatsf1	50	65.195	ENSXMAG00000000490	htatsf1	82	64.835	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	-	IEA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005684	U2-type spliceosomal complex	21873635.	IBA	Component
GO:0005686	U2 snRNP	21873635.	IBA	Component