EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000229159	-	628	-	ENSMUSP00000155144	35 (aa)	-	A0A2R8VHJ0
ENSMUST00000089377	-	800	-	ENSMUSP00000086795	135 (aa)	-	P16045

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000068220	Lgals1	100	88.148	ENSG00000100097	LGALS1	100	88.148	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002317	plasma cell differentiation	21753146.	IDA	Process
GO:0005515	protein binding	21217009.	IPI	Function
GO:0005534	galactose binding	3020551.	NAS	Function
GO:0005576	extracellular region	-	IEA	Component
GO:0005615	extracellular space	24006456.	HDA	Component
GO:0005615	extracellular space	11839787.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006915	apoptotic process	-	IEA	Process
GO:0007157	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	3020551.	NAS	Process
GO:0009986	cell surface	-	ISO	Component
GO:0010812	negative regulation of cell-substrate adhesion	-	ISO	Process
GO:0010977	negative regulation of neuron projection development	-	ISO	Process
GO:0030246	carbohydrate binding	21753146.	IDA	Function
GO:0030395	lactose binding	-	ISO	Function
GO:0031295	T cell costimulation	22357632.	IDA	Process
GO:0034120	positive regulation of erythrocyte aggregation	-	ISO	Process
GO:0042803	protein homodimerization activity	-	ISO	Function
GO:0043236	laminin binding	-	ISO	Function
GO:0045185	maintenance of protein location	21670307.	IDA	Process
GO:0045445	myoblast differentiation	11839787.	IDA	Process
GO:0046598	positive regulation of viral entry into host cell	-	ISO	Process
GO:0062023	collagen-containing extracellular matrix	28071719.	HDA	Component