EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000068699 (Gene tree)
Gene ID: 68794
Gene Symbol: Flnc
Alias: 1110055E19Rik|Fln2|actin binding protein 280
Full Name: filamin C%2C gamma
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 28628
Position: chr6: 29433256-29461883
Accession: 95557
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000148404	-	1151	-	-	- (aa)	-	-
ENSMUST00000101617	-	8939	-	ENSMUSP00000099139	2693 (aa)	-	Q8VHX6
ENSMUST00000065090	-	9038	-	ENSMUSP00000064163	2726 (aa)	-	Q8VHX6

Gene Model

Click here to download ENSMUSG00000068699's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04010	MAPK signaling pathway	KEGG
mmu04510	Focal adhesion	KEGG
mmu05132	Salmonella infection	KEGG
mmu05205	Proteoglycans in cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000068699's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000068699	Flnc	85	86.207	ENSG00000196924	FLNA	100	86.207	Homo_sapiens
ENSMUSG00000068699	Flnc	89	85.294	ENSMUSG00000031328	Flna	100	85.294	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003779	actin binding	8088838.	TAS	Function
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0008092	cytoskeletal protein binding	-	ISO	Function
GO:0015629	actin cytoskeleton	8088838.	TAS	Component
GO:0016020	membrane	-	IEA	Component
GO:0016528	sarcoplasm	-	ISO	Component
GO:0030029	actin filament-based process	8088838.	TAS	Process
GO:0030506	ankyrin binding	-	ISO	Function
GO:0042383	sarcolemma	-	ISO	Component
GO:0042802	identical protein binding	-	ISO	Function
GO:0048747	muscle fiber development	16914736.	IDA	Process
GO:0051015	actin filament binding	-	IEA	Function