EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000068749 (Gene tree)
Gene ID: 26442
Gene Symbol: Psma5
Alias: -
Full Name: proteasome (prosome%2C macropain) subunit%2C alpha type 5
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 23049
Position: chr3: 108256926-108279974
Accession: 1347009
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000090569	-	1239	-	ENSMUSP00000088057	241 (aa)	-	Q9Z2U1
ENSMUST00000129708	-	387	-	ENSMUSP00000143081	55 (aa)	-	A0A0G2JF97

Gene Model

Click here to download ENSMUSG00000068749's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03050	Proteasome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000068749's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000068749	Psma5	99	61.789	WBGene00003926	pas-5	99	61.789	Caenorhabditis_elegans

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000502	proteasome complex	-	ISO	Component
GO:0004175	endopeptidase activity	21873635.	IBA	Function
GO:0004298	threonine-type endopeptidase activity	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005839	proteasome core complex	21873635.	IBA	Component
GO:0005839	proteasome core complex	16857966.17540904.20498273.	IDA	Component
GO:0006508	proteolysis	-	IEA	Process
GO:0006511	ubiquitin-dependent protein catabolic process	-	IEA	Process
GO:0008233	peptidase activity	-	IEA	Function
GO:0010498	proteasomal protein catabolic process	21873635.	IBA	Process
GO:0010499	proteasomal ubiquitin-independent protein catabolic process	21873635.	IBA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0019773	proteasome core complex, alpha-subunit complex	21873635.	IBA	Component
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	21873635.	IBA	Process
GO:0051603	proteolysis involved in cellular protein catabolic process	-	IEA	Process