EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000069308 (Gene tree)
Gene ID: 319188
Gene Symbol: Hist1h2bp
Alias: -
Full Name: histone cluster 1%2C H2bp
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 1753
Position: chr13: 21787461-21789213
Accession: 2448409
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000102982	-	469	XM_006516690	ENSMUSP00000100047	126 (aa)	XP_006516753	Q8CGP2
ENSMUST00000110473	-	621	-	ENSMUSP00000106099	138 (aa)	-	Q8CGP2

Gene Model

Click here to download ENSMUSG00000069308's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05034	Alcoholism	KEGG
mmu05203	Viral carcinogenesis	KEGG
mmu05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000069308's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000069308	Hist1h2bp	97	70.492	YDR224C	HTB1	92	70.492	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000786	nucleosome	-	IEA	Component
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005694	chromosome	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006334	nucleosome assembly	21873635.	IBA	Process
GO:0046982	protein heterodimerization activity	-	IEA	Function