EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000069678 (Gene tree)
Gene ID: 69837
Gene Symbol: Pcgf1
Alias: 2010002K04Rik|Nspc1
Full Name: polycomb group ring finger 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 2987
Position: chr6: 83077869-83080855
Accession: 1917087
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000176100	-	549	-	ENSMUSP00000135882	52 (aa)	-	H3BLR0
ENSMUST00000165164	-	918	-	ENSMUSP00000130614	259 (aa)	-	Q8R023
ENSMUST00000176089	-	492	-	ENSMUSP00000135268	108 (aa)	-	H3BK63
ENSMUST00000092614	-	866	-	ENSMUSP00000090277	247 (aa)	-	A0A0R4J141
ENSMUST00000176372	-	426	-	-	- (aa)	-	-
ENSMUST00000176027	-	731	-	ENSMUSP00000135664	106 (aa)	-	H3BL61
ENSMUST00000204211	-	580	-	-	- (aa)	-	-
ENSMUST00000177177	-	854	-	ENSMUSP00000135291	176 (aa)	-	H3BK85

Gene Model

Click here to download ENSMUSG00000069678's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000069678's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0005515	protein binding	28596365.	IPI	Function
GO:0005634	nucleus	28596365.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0006342	chromatin silencing	21873635.	IBA	Process
GO:0008022	protein C-terminus binding	-	ISO	Function
GO:0031519	PcG protein complex	28596365.	IDA	Component
GO:0031519	PcG protein complex	-	ISO	Component
GO:0035102	PRC1 complex	21873635.	IBA	Component
GO:0035518	histone H2A monoubiquitination	-	ISO	Process
GO:0036353	histone H2A-K119 monoubiquitination	21873635.	IBA	Process
GO:0036353	histone H2A-K119 monoubiquitination	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:1990841	promoter-specific chromatin binding	21873635.	IBA	Function