EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000069769 (Gene tree)
Gene ID
76626
Gene Symbol
Msi2
Alias
Musashi2|msi2h
Full Name
musashi RNA-binding protein 2
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Minus strand
Length
379132 bases
Position
chr11:88339382-88718513
Accession
1923876
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000103542RRM_1PF00076.228e-3412
ENSMUSP00000103542RRM_1PF00076.228e-3422
ENSMUSP00000090470RRM_1PF00076.228.4e-3412
ENSMUSP00000090470RRM_1PF00076.228.4e-3422
ENSMUSP00000119684RRM_1PF00076.224.9e-2211
ENSMUSP00000103541RRM_1PF00076.224.9e-1711
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
25993413Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle ProgressionIC & MEF2015Boucas JDOI: 10.1371/journal.pone.0125745
27281784Identification of RNA binding Proteins in Macrophages by Interactome CaptureIC & RAW264.72016 Jun 8Liepelt ADOI: 10.1074/mcp.M115.056564
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseRBDmap & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000144699-405-ENSMUSP00000119684113 (aa)-B1AT10
ENSMUST00000126293-684--- (aa)--
ENSMUST00000092794-1855XM_006534431ENSMUSP00000090470346 (aa)XP_006534494Q920Q6
ENSMUST00000148013-1748--- (aa)--
ENSMUST00000138790-2516--- (aa)--
ENSMUST00000107908-695-ENSMUSP00000103541158 (aa)-B1AT13
ENSMUST00000107909-6436XM_006534438ENSMUSP00000103542328 (aa)XP_006534501Q920Q6
Gene Model
Click here to download ENSMUSG00000069769's gene model file
Pathways
Pathway IDPathway NameSource
mmu03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000069769's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000069769Msi210053.982ENSMUSG00000000568Hnrnpd10072.000
ENSMUSG00000069769Msi26538.667ENSMUSG00000101667Gm292896335.185
ENSMUSG00000069769Msi210044.348ENSMUSG00000004980Hnrnpa2b15648.193
ENSMUSG00000069769Msi26142.857ENSMUSG00000031134Rbmx8845.205
ENSMUSG00000069769Msi210046.087ENSMUSG00000046434Hnrnpa16350.000
ENSMUSG00000069769Msi26142.857ENSMUSG00000031167Rbm38243.243
ENSMUSG00000069769Msi210046.087ENSMUSG00000059005Hnrnpa36143.299
ENSMUSG00000069769Msi28633.562ENSMUSG00000027510Rbm386938.095
ENSMUSG00000069769Msi29941.228ENSMUSG00000007836Hnrnpa05941.989
ENSMUSG00000069769Msi26141.429ENSMUSG00000045193Cirbp8843.243
ENSMUSG00000069769Msi210045.217ENSMUSG00000092086Gm67935345.217
ENSMUSG00000069769Msi26033.824ENSMUSG00000021040Slirp7033.824
ENSMUSG00000069769Msi25033.333ENSMUSG00000025977Boll6532.857
ENSMUSG00000069769Msi29942.400ENSMUSG00000069565Dazap19249.462
ENSMUSG00000069769Msi27031.250ENSMUSG00000008489Elavl27232.632
ENSMUSG00000069769Msi210090.323ENSMUSG00000054256Msi19975.665
ENSMUSG00000069769Msi210035.398ENSMUSG00000041459Tardbp7831.818
ENSMUSG00000069769Msi210052.212ENSMUSG00000020358Hnrnpab7252.000
ENSMUSG00000069769Msi28430.208ENSMUSG00000028546Elavl47830.088
ENSMUSG00000069769Msi210054.867ENSMUSG00000029328Hnrnpdl7741.634
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000069769Msi2100100.000ENSG00000153944MSI2100100.000Homo_sapiens
ENSMUSG00000069769Msi210096.460ENSAPOG00000001658msi2a10087.805Acanthochromis_polyacanthus
ENSMUSG00000069769Msi2100100.000ENSAMEG00000002697MSI299100.000Ailuropoda_melanoleuca
ENSMUSG00000069769Msi210088.182ENSACIG00000009475msi2a10074.490Amphilophus_citrinellus
ENSMUSG00000069769Msi29788.182ENSAOCG00000014822msi2a6976.000Amphiprion_ocellaris
ENSMUSG00000069769Msi210096.460ENSAPEG00000007706msi2a10087.805Amphiprion_percula
ENSMUSG00000069769Msi210096.460ENSATEG00000010498msi2a10087.805Anabas_testudineus
ENSMUSG00000069769Msi210094.118ENSATEG00000003301-10093.165Anabas_testudineus
ENSMUSG00000069769Msi210098.667ENSACAG00000005452MSI27495.455Anolis_carolinensis
ENSMUSG00000069769Msi2100100.000ENSANAG00000037827MSI210099.695Aotus_nancymaae
ENSMUSG00000069769Msi210096.460ENSACLG00000007752msi2a10087.500Astatotilapia_calliptera
ENSMUSG00000069769Msi210099.115ENSAMXG00000010474msi2b9596.091Astyanax_mexicanus
ENSMUSG00000069769Msi210098.230ENSAMXG00000032796msi2a10091.489Astyanax_mexicanus
ENSMUSG00000069769Msi2100100.000ENSBTAG00000004406MSI29799.674Bos_taurus
ENSMUSG00000069769Msi210070.796WBGene00003423msi-17660.643Caenorhabditis_elegans
ENSMUSG00000069769Msi2100100.000ENSCJAG00000013998MSI210099.695Callithrix_jacchus
ENSMUSG00000069769Msi2100100.000ENSCAFG00020025620MSI28198.746Canis_lupus_dingo
ENSMUSG00000069769Msi2100100.000ENSCHIG00000016580MSI210098.780Capra_hircus
ENSMUSG00000069769Msi29495.390ENSCPOG00000034042MSI29995.390Cavia_porcellus
ENSMUSG00000069769Msi2100100.000ENSCCAG00000033927MSI210099.695Cebus_capucinus
ENSMUSG00000069769Msi2100100.000ENSCATG00000040879MSI210098.476Cercocebus_atys
ENSMUSG00000069769Msi2100100.000ENSCLAG00000014325MSI210099.711Chinchilla_lanigera
ENSMUSG00000069769Msi2100100.000ENSCSAG00000005633MSI210099.695Chlorocebus_sabaeus
ENSMUSG00000069769Msi210080.000ENSCHOG00000008660MSI283100.000Choloepus_hoffmanni
ENSMUSG00000069769Msi210098.649ENSCPBG00000009942MSI29693.688Chrysemys_picta_bellii
ENSMUSG00000069769Msi210080.645ENSCING00000018579-9753.125Ciona_intestinalis
ENSMUSG00000069769Msi210065.574ENSCSAVG00000010397-7265.517Ciona_savignyi
ENSMUSG00000069769Msi2100100.000ENSCANG00000036414MSI2100100.000Colobus_angolensis_palliatus
ENSMUSG00000069769Msi2100100.000ENSCGRG00001013330Msi210099.696Cricetulus_griseus_chok1gshd
ENSMUSG00000069769Msi2100100.000ENSCGRG00000003141Msi210099.693Cricetulus_griseus_crigri
ENSMUSG00000069769Msi27875.258ENSCSEG00000013557msi2a8373.711Cynoglossus_semilaevis
ENSMUSG00000069769Msi210092.920ENSCSEG00000003266-10079.573Cynoglossus_semilaevis
ENSMUSG00000069769Msi210092.920ENSCSEG00000013549msi2a10073.370Cynoglossus_semilaevis
ENSMUSG00000069769Msi210096.460ENSCVAG00000017075msi2a10087.179Cyprinodon_variegatus
ENSMUSG00000069769Msi210098.230ENSDARG00000032614msi2b10098.020Danio_rerio
ENSMUSG00000069769Msi210094.690ENSDARG00000033901msi2a10079.381Danio_rerio
ENSMUSG00000069769Msi2100100.000ENSDNOG00000014501MSI2100100.000Dasypus_novemcinctus
ENSMUSG00000069769Msi2100100.000ENSDORG00000028440-100100.000Dipodomys_ordii
ENSMUSG00000069769Msi27888.832ENSDORG00000005394Msi28487.817Dipodomys_ordii
ENSMUSG00000069769Msi29986.667FBgn0260943Rbp68868.750Drosophila_melanogaster
ENSMUSG00000069769Msi2100100.000ENSETEG00000012450-6476.316Echinops_telfairi
ENSMUSG00000069769Msi28990.099ENSEBUG00000006732msi2a8768.489Eptatretus_burgeri
ENSMUSG00000069769Msi2100100.000ENSEASG00005002965MSI29789.143Equus_asinus_asinus
ENSMUSG00000069769Msi2100100.000ENSECAG00000011435MSI210097.175Equus_caballus
ENSMUSG00000069769Msi28285.375ENSEEUG00000007810MSI210085.375Erinaceus_europaeus
ENSMUSG00000069769Msi210097.345ENSELUG00000001361msi2b10087.143Esox_lucius
ENSMUSG00000069769Msi210098.230ENSELUG00000011747msi2a10089.024Esox_lucius
ENSMUSG00000069769Msi2100100.000ENSFCAG00000041686MSI210099.695Felis_catus
ENSMUSG00000069769Msi29687.156ENSFCAG00000033787-9271.930Felis_catus
ENSMUSG00000069769Msi2100100.000ENSFDAG00000016118MSI2100100.000Fukomys_damarensis
ENSMUSG00000069769Msi210096.460ENSFHEG00000000084msi2a9692.763Fundulus_heteroclitus
ENSMUSG00000069769Msi27396.341ENSGMOG00000007596-10092.308Gadus_morhua
ENSMUSG00000069769Msi210098.230ENSGALG00000005567MSI210096.243Gallus_gallus
ENSMUSG00000069769Msi210096.460ENSGAFG00000006974msi2a9093.377Gambusia_affinis
ENSMUSG00000069769Msi210098.947ENSGAGG00000016542MSI210096.053Gopherus_agassizii
ENSMUSG00000069769Msi2100100.000ENSGGOG00000013182MSI2100100.000Gorilla_gorilla
ENSMUSG00000069769Msi210096.460ENSHBUG00000020800msi2a10087.500Haplochromis_burtoni
ENSMUSG00000069769Msi210090.751ENSHGLG00000012444MSI210090.751Heterocephalus_glaber_female
ENSMUSG00000069769Msi276100.000ENSHGLG00100003744MSI2100100.000Heterocephalus_glaber_male
ENSMUSG00000069769Msi2100100.000ENSHGLG00100004028-87100.000Heterocephalus_glaber_male
ENSMUSG00000069769Msi210086.275ENSHCOG00000017241-7781.557Hippocampus_comes
ENSMUSG00000069769Msi210095.575ENSHCOG00000000266msi2a9784.795Hippocampus_comes
ENSMUSG00000069769Msi210096.460ENSIPUG00000021097msi2a10086.890Ictalurus_punctatus
ENSMUSG00000069769Msi210099.115ENSIPUG00000003732msi2b9294.286Ictalurus_punctatus
ENSMUSG00000069769Msi29495.390ENSSTOG00000007884MSI29995.390Ictidomys_tridecemlineatus
ENSMUSG00000069769Msi27688.889ENSJJAG00000006292-10088.406Jaculus_jaculus
ENSMUSG00000069769Msi2100100.000ENSJJAG00000009467-100100.000Jaculus_jaculus
ENSMUSG00000069769Msi210095.575ENSKMAG00000009494msi2a9691.401Kryptolebias_marmoratus
ENSMUSG00000069769Msi210083.529ENSLBEG00000026223-10068.915Labrus_bergylta
ENSMUSG00000069769Msi210096.460ENSLBEG00000007061msi2a10087.805Labrus_bergylta
ENSMUSG00000069769Msi27396.386ENSLACG00000016798MSI29892.308Latimeria_chalumnae
ENSMUSG00000069769Msi210098.230ENSLOCG00000004675msi2b10083.740Lepisosteus_oculatus
ENSMUSG00000069769Msi2100100.000ENSMFAG00000003775MSI2100100.000Macaca_fascicularis
ENSMUSG00000069769Msi2100100.000ENSMMUG00000002069MSI2100100.000Macaca_mulatta
ENSMUSG00000069769Msi2100100.000ENSMNEG00000045275MSI210099.695Macaca_nemestrina
ENSMUSG00000069769Msi2100100.000ENSMLEG00000033888MSI2100100.000Mandrillus_leucophaeus
ENSMUSG00000069769Msi210095.575ENSMAMG00000002488-9992.053Mastacembelus_armatus
ENSMUSG00000069769Msi210096.460ENSMAMG00000010503msi2a10086.280Mastacembelus_armatus
ENSMUSG00000069769Msi210096.460ENSMZEG00005007676msi2a10092.073Maylandia_zebra
ENSMUSG00000069769Msi2100100.000ENSMAUG00000003862Msi210099.712Mesocricetus_auratus
ENSMUSG00000069769Msi210086.726ENSMICG00000032913-10079.279Microcebus_murinus
ENSMUSG00000069769Msi2100100.000ENSMICG00000013598-10099.695Microcebus_murinus
ENSMUSG00000069769Msi2100100.000ENSMOCG00000005820Msi2100100.000Microtus_ochrogaster
ENSMUSG00000069769Msi210094.690ENSMMOG00000008348msi2a9184.858Mola_mola
ENSMUSG00000069769Msi27698.551ENSMODG00000014790MSI210098.551Monodelphis_domestica
ENSMUSG00000069769Msi210096.460ENSMALG00000000071msi2a10092.810Monopterus_albus
ENSMUSG00000069769Msi2100100.000MGP_CAROLIEiJ_G0016948Msi2100100.000Mus_caroli
ENSMUSG00000069769Msi2100100.000MGP_PahariEiJ_G0018079Msi2100100.000Mus_pahari
ENSMUSG00000069769Msi2100100.000MGP_SPRETEiJ_G0017795Msi2100100.000Mus_spretus
ENSMUSG00000069769Msi2100100.000ENSMPUG00000015377MSI297100.000Mustela_putorius_furo
ENSMUSG00000069769Msi210099.115ENSMLUG00000007865MSI29799.674Myotis_lucifugus
ENSMUSG00000069769Msi2100100.000ENSNGAG00000017807Msi2100100.000Nannospalax_galili
ENSMUSG00000069769Msi210096.460ENSNBRG00000014596msi2a10087.500Neolamprologus_brichardi
ENSMUSG00000069769Msi2100100.000ENSNLEG00000008059MSI2100100.000Nomascus_leucogenys
ENSMUSG00000069769Msi299100.000ENSOPRG00000000872-6488.816Ochotona_princeps
ENSMUSG00000069769Msi2100100.000ENSODEG00000011974MSI210099.711Octodon_degus
ENSMUSG00000069769Msi210096.460ENSONIG00000001972msi2a8493.377Oreochromis_niloticus
ENSMUSG00000069769Msi210099.115ENSOANG00000005667MSI27795.745Ornithorhynchus_anatinus
ENSMUSG00000069769Msi2100100.000ENSOCUG00000010440MSI297100.000Oryctolagus_cuniculus
ENSMUSG00000069769Msi210096.460ENSORLG00000009671msi2a9592.357Oryzias_latipes
ENSMUSG00000069769Msi210096.460ENSORLG00020021556msi2a9493.151Oryzias_latipes_hni
ENSMUSG00000069769Msi210096.460ENSORLG00015004592msi2a9592.357Oryzias_latipes_hsok
ENSMUSG00000069769Msi210096.460ENSOMEG00000000146msi2a9891.694Oryzias_melastigma
ENSMUSG00000069769Msi2100100.000ENSOGAG00000005621MSI29995.440Otolemur_garnettii
ENSMUSG00000069769Msi2100100.000ENSPPAG00000037697MSI2100100.000Pan_paniscus
ENSMUSG00000069769Msi2100100.000ENSPPRG00000001848MSI294100.000Panthera_pardus
ENSMUSG00000069769Msi210079.817ENSPTIG00000021873-9278.512Panthera_tigris_altaica
ENSMUSG00000069769Msi2100100.000ENSPTIG00000021678MSI296100.000Panthera_tigris_altaica
ENSMUSG00000069769Msi2100100.000ENSPTRG00000009437MSI2100100.000Pan_troglodytes
ENSMUSG00000069769Msi2100100.000ENSPANG00000022319MSI210099.695Papio_anubis
ENSMUSG00000069769Msi210095.575ENSPKIG00000007038-9685.758Paramormyrops_kingsleyae
ENSMUSG00000069769Msi26195.652ENSPKIG00000017107-8191.209Paramormyrops_kingsleyae
ENSMUSG00000069769Msi210099.115ENSPSIG00000008618MSI28796.269Pelodiscus_sinensis
ENSMUSG00000069769Msi210088.182ENSPMGG00000005888msi2a10087.195Periophthalmus_magnuspinnatus
ENSMUSG00000069769Msi2100100.000ENSPEMG00000021793-100100.000Peromyscus_maniculatus_bairdii
ENSMUSG00000069769Msi210099.115ENSPCIG00000006063MSI210095.198Phascolarctos_cinereus
ENSMUSG00000069769Msi27393.976ENSPFOG00000019337MSI29290.476Poecilia_formosa
ENSMUSG00000069769Msi210096.460ENSPLAG00000000436msi2a7690.141Poecilia_latipinna
ENSMUSG00000069769Msi29788.182ENSPMEG00000013247msi2a8079.021Poecilia_mexicana
ENSMUSG00000069769Msi210096.460ENSPREG00000000881msi2a9985.366Poecilia_reticulata
ENSMUSG00000069769Msi2100100.000ENSPPYG00000008244-10096.639Pongo_abelii
ENSMUSG00000069769Msi27370.588ENSPCAG00000010552MSI210070.588Procavia_capensis
ENSMUSG00000069769Msi2100100.000ENSPCOG00000019195-9399.237Propithecus_coquereli
ENSMUSG00000069769Msi2100100.000ENSPVAG00000017053MSI210090.785Pteropus_vampyrus
ENSMUSG00000069769Msi210096.460ENSPNYG00000018393msi2a10092.073Pundamilia_nyererei
ENSMUSG00000069769Msi210097.345ENSPNAG00000014957msi2a10091.793Pygocentrus_nattereri
ENSMUSG00000069769Msi210099.115ENSPNAG00000000844msi2b10088.450Pygocentrus_nattereri
ENSMUSG00000069769Msi2100100.000ENSRNOG00000025338Msi2100100.000Rattus_norvegicus
ENSMUSG00000069769Msi25881.319ENSRBIG00000032064-8481.319Rhinopithecus_bieti
ENSMUSG00000069769Msi2100100.000ENSRROG00000034421-9299.130Rhinopithecus_roxellana
ENSMUSG00000069769Msi2100100.000ENSSBOG00000026425MSI2100100.000Saimiri_boliviensis_boliviensis
ENSMUSG00000069769Msi210099.115ENSSHAG00000008672MSI210098.765Sarcophilus_harrisii
ENSMUSG00000069769Msi210092.035ENSSFOG00015021687-9787.948Scleropages_formosus
ENSMUSG00000069769Msi29682.041ENSSFOG00015012168msi2b8282.041Scleropages_formosus
ENSMUSG00000069769Msi210096.460ENSSMAG00000018484msi2a10087.805Scophthalmus_maximus
ENSMUSG00000069769Msi210096.460ENSSDUG00000014507msi2a10087.805Seriola_dumerili
ENSMUSG00000069769Msi210094.690ENSSDUG00000021968-9991.391Seriola_dumerili
ENSMUSG00000069769Msi210096.460ENSSLDG00000017172msi2a10087.805Seriola_lalandi_dorsalis
ENSMUSG00000069769Msi25291.525ENSSLDG00000021332-6874.725Seriola_lalandi_dorsalis
ENSMUSG00000069769Msi210098.230ENSSPUG00000000913-9493.671Sphenodon_punctatus
ENSMUSG00000069769Msi210096.460ENSSPAG00000017793msi2a9685.714Stegastes_partitus
ENSMUSG00000069769Msi2100100.000ENSSSCG00000038505MSI210099.695Sus_scrofa
ENSMUSG00000069769Msi27699.034ENSTGUG00000008452MSI210099.034Taeniopygia_guttata
ENSMUSG00000069769Msi210096.460ENSTRUG00000021248msi2a10086.567Takifugu_rubripes
ENSMUSG00000069769Msi210084.071ENSTBEG00000001241MSI27382.231Tupaia_belangeri
ENSMUSG00000069769Msi2100100.000ENSTTRG00000002189MSI210090.756Tursiops_truncatus
ENSMUSG00000069769Msi2100100.000ENSUAMG00000000700MSI297100.000Ursus_americanus
ENSMUSG00000069769Msi2100100.000ENSUMAG00000000505MSI29592.075Ursus_maritimus
ENSMUSG00000069769Msi2100100.000ENSVPAG00000006837-6284.615Vicugna_pacos
ENSMUSG00000069769Msi2100100.000ENSVVUG00000011783MSI210099.711Vulpes_vulpes
ENSMUSG00000069769Msi210094.690ENSXCOG00000006113msi2a10077.979Xiphophorus_couchianus
ENSMUSG00000069769Msi210096.460ENSXMAG00000000608msi2a10087.179Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding21873635.IBAFunction
GO:0003727single-stranded RNA binding11588182.IDAFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0005737cytoplasm11588182.IDAComponent
GO:0005844polysome21873635.IBAComponent
GO:0005844polysome11588182.IDAComponent
GO:0008266poly(U) RNA binding11588182.IDAFunction
GO:0048864stem cell development12407178.IMPProcess
GO:1990904ribonucleoprotein complex21873635.IBAComponent

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