EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000071350 (Gene tree)
Gene ID: 239122
Gene Symbol: Setdb2
Alias: KMT1F|LOC239122
Full Name: SET domain%2C bifurcated 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 38876 bases
Position: chr14:59402009-59440884
Accession: 2685139
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000124696	MBD	PF01429.19	5.2e-07	1	1
ENSMUSP00000093450	MBD	PF01429.19	5.4e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000159640	-	720	-	-	- (aa)	-	-
ENSMUST00000095775	-	3034	-	ENSMUSP00000093450	713 (aa)	-	Q8C267
ENSMUST00000161459	-	2995	-	ENSMUSP00000124696	697 (aa)	-	B2RXP3
ENSMUST00000111253	-	1774	-	ENSMUSP00000106884	140 (aa)	-	Q8C267
ENSMUST00000160904	-	410	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000071350's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000071350's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000071350	Setdb2	100	67.514	ENSG00000136169	SETDB2	100	67.514	Homo_sapiens
ENSMUSG00000071350	Setdb2	56	53.763	ENSAPOG00000020220	-	87	53.763	Acanthochromis_polyacanthus
ENSMUSG00000071350	Setdb2	99	65.951	ENSAMEG00000003443	SETDB2	70	65.951	Ailuropoda_melanoleuca
ENSMUSG00000071350	Setdb2	88	32.746	ENSACIG00000009349	-	92	33.586	Amphilophus_citrinellus
ENSMUSG00000071350	Setdb2	76	40.278	ENSAOCG00000006560	-	95	32.195	Amphiprion_ocellaris
ENSMUSG00000071350	Setdb2	51	48.039	ENSAPEG00000009529	-	72	40.288	Amphiprion_percula
ENSMUSG00000071350	Setdb2	51	54.118	ENSATEG00000008915	-	61	54.118	Anabas_testudineus
ENSMUSG00000071350	Setdb2	99	44.304	ENSAPLG00000009061	SETDB2	100	44.304	Anas_platyrhynchos
ENSMUSG00000071350	Setdb2	100	43.296	ENSACAG00000014036	SETDB2	100	43.296	Anolis_carolinensis
ENSMUSG00000071350	Setdb2	90	66.248	ENSANAG00000028107	SETDB2	100	66.248	Aotus_nancymaae
ENSMUSG00000071350	Setdb2	69	48.980	ENSACLG00000004046	-	77	48.980	Astatotilapia_calliptera
ENSMUSG00000071350	Setdb2	70	60.215	ENSAMXG00000016092	setdb2	80	60.215	Astyanax_mexicanus
ENSMUSG00000071350	Setdb2	100	63.701	ENSBTAG00000007329	SETDB2	100	63.701	Bos_taurus
ENSMUSG00000071350	Setdb2	100	66.902	ENSCJAG00000008864	SETDB2	100	66.902	Callithrix_jacchus
ENSMUSG00000071350	Setdb2	99	64.045	ENSCAFG00000004341	SETDB2	100	64.045	Canis_familiaris
ENSMUSG00000071350	Setdb2	100	65.106	ENSCAFG00020020283	SETDB2	100	65.106	Canis_lupus_dingo
ENSMUSG00000071350	Setdb2	100	64.124	ENSCHIG00000014895	SETDB2	100	64.124	Capra_hircus
ENSMUSG00000071350	Setdb2	99	65.816	ENSTSYG00000014051	SETDB2	99	65.816	Carlito_syrichta
ENSMUSG00000071350	Setdb2	65	63.261	ENSCAPG00000014168	-	95	63.261	Cavia_aperea
ENSMUSG00000071350	Setdb2	92	62.787	ENSCPOG00000002194	SETDB2	97	62.787	Cavia_porcellus
ENSMUSG00000071350	Setdb2	100	67.044	ENSCCAG00000031604	SETDB2	100	67.044	Cebus_capucinus
ENSMUSG00000071350	Setdb2	100	66.949	ENSCATG00000002055	SETDB2	100	66.949	Cercocebus_atys
ENSMUSG00000071350	Setdb2	100	63.932	ENSCLAG00000007348	SETDB2	100	63.932	Chinchilla_lanigera
ENSMUSG00000071350	Setdb2	100	66.478	ENSCSAG00000017713	SETDB2	100	66.478	Chlorocebus_sabaeus
ENSMUSG00000071350	Setdb2	90	42.923	ENSCPBG00000008524	SETDB2	92	41.083	Chrysemys_picta_bellii
ENSMUSG00000071350	Setdb2	99	62.587	ENSCANG00000033506	SETDB2	100	62.413	Colobus_angolensis_palliatus
ENSMUSG00000071350	Setdb2	100	77.507	ENSCGRG00001011194	Setdb2	100	77.507	Cricetulus_griseus_chok1gshd
ENSMUSG00000071350	Setdb2	100	77.507	ENSCGRG00000000801	Setdb2	100	77.507	Cricetulus_griseus_crigri
ENSMUSG00000071350	Setdb2	68	56.180	ENSCVAG00000004116	-	95	34.085	Cyprinodon_variegatus
ENSMUSG00000071350	Setdb2	59	62.295	ENSDARG00000101462	setdb2	70	62.295	Danio_rerio
ENSMUSG00000071350	Setdb2	100	62.639	ENSDNOG00000033679	SETDB2	100	62.639	Dasypus_novemcinctus
ENSMUSG00000071350	Setdb2	99	63.624	ENSDORG00000026163	Setdb2	100	63.624	Dipodomys_ordii
ENSMUSG00000071350	Setdb2	81	68.210	ENSETEG00000004821	SETDB2	81	68.210	Echinops_telfairi
ENSMUSG00000071350	Setdb2	100	67.655	ENSEASG00005017285	SETDB2	100	67.655	Equus_asinus_asinus
ENSMUSG00000071350	Setdb2	100	67.797	ENSECAG00000020357	SETDB2	100	67.797	Equus_caballus
ENSMUSG00000071350	Setdb2	99	59.524	ENSEEUG00000011247	SETDB2	100	59.524	Erinaceus_europaeus
ENSMUSG00000071350	Setdb2	69	58.511	ENSELUG00000024242	-	76	58.511	Esox_lucius
ENSMUSG00000071350	Setdb2	100	65.771	ENSFCAG00000012034	SETDB2	100	65.771	Felis_catus
ENSMUSG00000071350	Setdb2	99	44.186	ENSFALG00000008379	SETDB2	97	44.186	Ficedula_albicollis
ENSMUSG00000071350	Setdb2	99	65.187	ENSFDAG00000017408	SETDB2	100	65.187	Fukomys_damarensis
ENSMUSG00000071350	Setdb2	99	42.559	ENSGALG00000017006	SETDB2	97	42.798	Gallus_gallus
ENSMUSG00000071350	Setdb2	89	33.010	ENSGAFG00000000077	-	95	33.010	Gambusia_affinis
ENSMUSG00000071350	Setdb2	89	30.000	ENSGACG00000015463	-	95	30.147	Gasterosteus_aculeatus
ENSMUSG00000071350	Setdb2	99	46.759	ENSGAGG00000014099	SETDB2	96	46.759	Gopherus_agassizii
ENSMUSG00000071350	Setdb2	100	67.655	ENSGGOG00000016016	SETDB2	100	67.655	Gorilla_gorilla
ENSMUSG00000071350	Setdb2	68	52.381	ENSHBUG00000001477	-	75	52.381	Haplochromis_burtoni
ENSMUSG00000071350	Setdb2	100	65.395	ENSHGLG00000003820	SETDB2	99	65.395	Heterocephalus_glaber_female
ENSMUSG00000071350	Setdb2	100	65.254	ENSHGLG00100008642	SETDB2	99	65.254	Heterocephalus_glaber_male
ENSMUSG00000071350	Setdb2	67	62.857	ENSHCOG00000007071	-	75	62.857	Hippocampus_comes
ENSMUSG00000071350	Setdb2	68	59.091	ENSIPUG00000011157	setdb2	79	59.091	Ictalurus_punctatus
ENSMUSG00000071350	Setdb2	100	67.090	ENSSTOG00000002985	SETDB2	100	67.090	Ictidomys_tridecemlineatus
ENSMUSG00000071350	Setdb2	99	65.903	ENSJJAG00000011079	Setdb2	99	65.903	Jaculus_jaculus
ENSMUSG00000071350	Setdb2	68	52.273	ENSKMAG00000012100	-	75	52.273	Kryptolebias_marmoratus
ENSMUSG00000071350	Setdb2	99	38.904	ENSLACG00000009640	SETDB2	99	37.565	Latimeria_chalumnae
ENSMUSG00000071350	Setdb2	87	45.926	ENSLOCG00000009739	-	93	45.926	Lepisosteus_oculatus
ENSMUSG00000071350	Setdb2	99	65.778	ENSLAFG00000012612	SETDB2	100	65.778	Loxodonta_africana
ENSMUSG00000071350	Setdb2	100	66.949	ENSMFAG00000032631	SETDB2	100	66.949	Macaca_fascicularis
ENSMUSG00000071350	Setdb2	100	66.949	ENSMMUG00000013473	SETDB2	100	66.949	Macaca_mulatta
ENSMUSG00000071350	Setdb2	100	66.949	ENSMNEG00000037148	SETDB2	100	66.949	Macaca_nemestrina
ENSMUSG00000071350	Setdb2	100	66.949	ENSMLEG00000043613	SETDB2	100	66.949	Mandrillus_leucophaeus
ENSMUSG00000071350	Setdb2	74	56.522	ENSMAMG00000022781	-	82	56.522	Mastacembelus_armatus
ENSMUSG00000071350	Setdb2	69	48.980	ENSMZEG00005012098	-	77	48.980	Maylandia_zebra
ENSMUSG00000071350	Setdb2	99	44.930	ENSMGAG00000015017	SETDB2	100	44.930	Meleagris_gallopavo
ENSMUSG00000071350	Setdb2	100	76.934	ENSMAUG00000012871	Setdb2	100	76.934	Mesocricetus_auratus
ENSMUSG00000071350	Setdb2	100	65.064	ENSMICG00000012641	SETDB2	100	65.064	Microcebus_murinus
ENSMUSG00000071350	Setdb2	100	74.032	ENSMOCG00000021987	Setdb2	100	74.032	Microtus_ochrogaster
ENSMUSG00000071350	Setdb2	100	49.794	ENSMODG00000010929	SETDB2	100	49.794	Monodelphis_domestica
ENSMUSG00000071350	Setdb2	69	52.874	ENSMALG00000001256	-	75	52.874	Monopterus_albus
ENSMUSG00000071350	Setdb2	100	94.118	MGP_CAROLIEiJ_G0019367	Setdb2	100	94.118	Mus_caroli
ENSMUSG00000071350	Setdb2	100	91.679	MGP_PahariEiJ_G0030385	Setdb2	100	91.679	Mus_pahari
ENSMUSG00000071350	Setdb2	100	97.848	MGP_SPRETEiJ_G0020259	Setdb2	100	97.848	Mus_spretus
ENSMUSG00000071350	Setdb2	100	65.488	ENSMPUG00000018019	SETDB2	100	65.488	Mustela_putorius_furo
ENSMUSG00000071350	Setdb2	99	64.438	ENSMLUG00000004378	SETDB2	99	64.438	Myotis_lucifugus
ENSMUSG00000071350	Setdb2	100	72.246	ENSNGAG00000013911	Setdb2	100	72.246	Nannospalax_galili
ENSMUSG00000071350	Setdb2	100	67.090	ENSNLEG00000003613	SETDB2	100	67.090	Nomascus_leucogenys
ENSMUSG00000071350	Setdb2	93	44.510	ENSMEUG00000005220	-	100	44.510	Notamacropus_eugenii
ENSMUSG00000071350	Setdb2	84	67.422	ENSOPRG00000012261	SETDB2	83	67.422	Ochotona_princeps
ENSMUSG00000071350	Setdb2	69	48.352	ENSONIG00000009000	-	95	33.985	Oreochromis_niloticus
ENSMUSG00000071350	Setdb2	99	48.811	ENSOANG00000015546	SETDB2	93	48.951	Ornithorhynchus_anatinus
ENSMUSG00000071350	Setdb2	100	64.099	ENSOCUG00000003755	SETDB2	100	64.099	Oryctolagus_cuniculus
ENSMUSG00000071350	Setdb2	69	53.933	ENSORLG00000001147	-	78	53.933	Oryzias_latipes
ENSMUSG00000071350	Setdb2	69	53.933	ENSORLG00020006680	-	78	53.933	Oryzias_latipes_hni
ENSMUSG00000071350	Setdb2	69	53.933	ENSORLG00015009952	-	78	53.933	Oryzias_latipes_hsok
ENSMUSG00000071350	Setdb2	100	64.337	ENSOGAG00000005339	SETDB2	100	64.337	Otolemur_garnettii
ENSMUSG00000071350	Setdb2	100	64.124	ENSOARG00000008487	SETDB2	100	64.124	Ovis_aries
ENSMUSG00000071350	Setdb2	100	67.655	ENSPPAG00000039854	SETDB2	100	67.655	Pan_paniscus
ENSMUSG00000071350	Setdb2	100	66.195	ENSPPRG00000000069	SETDB2	100	66.195	Panthera_pardus
ENSMUSG00000071350	Setdb2	100	66.337	ENSPTIG00000006314	SETDB2	100	66.337	Panthera_tigris_altaica
ENSMUSG00000071350	Setdb2	100	67.514	ENSPTRG00000005873	SETDB2	100	67.514	Pan_troglodytes
ENSMUSG00000071350	Setdb2	100	66.808	ENSPANG00000017051	SETDB2	100	66.808	Papio_anubis
ENSMUSG00000071350	Setdb2	74	58.511	ENSPKIG00000009795	-	84	58.511	Paramormyrops_kingsleyae
ENSMUSG00000071350	Setdb2	99	44.205	ENSPSIG00000002200	SETDB2	95	44.205	Pelodiscus_sinensis
ENSMUSG00000071350	Setdb2	100	52.500	ENSPCIG00000002912	SETDB2	100	52.434	Phascolarctos_cinereus
ENSMUSG00000071350	Setdb2	89	32.763	ENSPFOG00000006673	-	94	32.763	Poecilia_formosa
ENSMUSG00000071350	Setdb2	89	33.007	ENSPLAG00000016914	-	94	33.007	Poecilia_latipinna
ENSMUSG00000071350	Setdb2	89	32.763	ENSPMEG00000003842	-	94	32.763	Poecilia_mexicana
ENSMUSG00000071350	Setdb2	89	33.498	ENSPREG00000022531	-	94	33.498	Poecilia_reticulata
ENSMUSG00000071350	Setdb2	100	67.232	ENSPPYG00000005368	SETDB2	100	67.232	Pongo_abelii
ENSMUSG00000071350	Setdb2	59	89.706	ENSPCAG00000010230	-	58	89.706	Procavia_capensis
ENSMUSG00000071350	Setdb2	93	66.717	ENSPCOG00000017644	SETDB2	99	66.616	Propithecus_coquereli
ENSMUSG00000071350	Setdb2	100	62.256	ENSPVAG00000006911	SETDB2	100	62.256	Pteropus_vampyrus
ENSMUSG00000071350	Setdb2	78	38.550	ENSPNYG00000023676	-	83	38.550	Pundamilia_nyererei
ENSMUSG00000071350	Setdb2	69	56.863	ENSPNAG00000011459	setdb2	81	56.863	Pygocentrus_nattereri
ENSMUSG00000071350	Setdb2	100	84.075	ENSRNOG00000021680	Setdb2	100	84.075	Rattus_norvegicus
ENSMUSG00000071350	Setdb2	100	67.090	ENSRBIG00000006562	SETDB2	100	67.090	Rhinopithecus_bieti
ENSMUSG00000071350	Setdb2	100	66.949	ENSRROG00000032499	SETDB2	100	66.949	Rhinopithecus_roxellana
ENSMUSG00000071350	Setdb2	100	66.902	ENSSBOG00000023249	SETDB2	100	66.902	Saimiri_boliviensis_boliviensis
ENSMUSG00000071350	Setdb2	100	52.957	ENSSHAG00000007281	SETDB2	100	52.957	Sarcophilus_harrisii
ENSMUSG00000071350	Setdb2	69	63.636	ENSSFOG00015008204	-	75	63.636	Scleropages_formosus
ENSMUSG00000071350	Setdb2	68	53.409	ENSSDUG00000002987	-	76	53.409	Seriola_dumerili
ENSMUSG00000071350	Setdb2	68	54.545	ENSSLDG00000015081	-	75	54.545	Seriola_lalandi_dorsalis
ENSMUSG00000071350	Setdb2	100	61.135	ENSSARG00000009926	SETDB2	100	61.135	Sorex_araneus
ENSMUSG00000071350	Setdb2	71	42.857	ENSSPAG00000006869	-	98	32.360	Stegastes_partitus
ENSMUSG00000071350	Setdb2	100	65.106	ENSSSCG00000009395	SETDB2	100	65.106	Sus_scrofa
ENSMUSG00000071350	Setdb2	86	94.872	ENSTBEG00000008013	SETDB2	89	94.872	Tupaia_belangeri
ENSMUSG00000071350	Setdb2	100	63.418	ENSTTRG00000012932	SETDB2	100	63.418	Tursiops_truncatus
ENSMUSG00000071350	Setdb2	100	66.620	ENSUMAG00000018406	SETDB2	100	66.620	Ursus_maritimus
ENSMUSG00000071350	Setdb2	100	61.571	ENSVPAG00000012019	SETDB2	100	61.571	Vicugna_pacos
ENSMUSG00000071350	Setdb2	85	60.333	ENSVVUG00000028174	SETDB2	92	60.333	Vulpes_vulpes
ENSMUSG00000071350	Setdb2	99	42.008	ENSXETG00000015666	setdb2	100	42.008	Xenopus_tropicalis
ENSMUSG00000071350	Setdb2	73	36.735	ENSXMAG00000006323	-	81	36.735	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000278	mitotic cell cycle	-	ISO	Process
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005694	chromosome	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006325	chromatin organization	-	IEA	Process
GO:0007049	cell cycle	-	IEA	Process
GO:0007059	chromosome segregation	-	ISO	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0008270	zinc ion binding	-	IEA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0018024	histone-lysine N-methyltransferase activity	-	IEA	Function
GO:0032259	methylation	-	IEA	Process
GO:0034968	histone lysine methylation	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0046974	histone methyltransferase activity (H3-K9 specific)	-	ISO	Function
GO:0051301	cell division	-	IEA	Process
GO:0051567	histone H3-K9 methylation	-	ISO	Process