EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000114303	-	716	-	ENSMUSP00000133546	234 (aa)	-	G3UX44
ENSMUST00000173894	-	753	-	-	- (aa)	-	-
ENSMUST00000174029	-	459	-	-	- (aa)	-	-
ENSMUST00000170644	-	1293	-	-	- (aa)	-	-
ENSMUST00000173616	-	534	-	-	- (aa)	-	-
ENSMUST00000045467	-	965	-	ENSMUSP00000038069	259 (aa)	-	P50171
ENSMUST00000174399	-	728	-	-	- (aa)	-	-
ENSMUST00000173425	-	649	-	-	- (aa)	-	-

Gene Model

Pathways

Pathway ID	Pathway Name	Source
mmu00061	Fatty acid biosynthesis	KEGG
mmu00140	Steroid hormone biosynthesis	KEGG
mmu01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity	-	ISO	Function
GO:0004303	estradiol 17-beta-dehydrogenase activity	9712896.	IDA	Function
GO:0004303	estradiol 17-beta-dehydrogenase activity	-	ISO	Function
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005740	mitochondrial envelope	8940387.	IDA	Component
GO:0005759	mitochondrial matrix	-	ISO	Component
GO:0005886	plasma membrane	8940387.	IDA	Component
GO:0006629	lipid metabolic process	-	IEA	Process
GO:0006631	fatty acid metabolic process	-	IEA	Process
GO:0006633	fatty acid biosynthetic process	-	ISO	Process
GO:0006694	steroid biosynthetic process	-	IEA	Process
GO:0006703	estrogen biosynthetic process	-	ISO	Process
GO:0008209	androgen metabolic process	9712896.	IDA	Process
GO:0008210	estrogen metabolic process	9712896.	IDA	Process
GO:0016020	membrane	8940387.	IDA	Component
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0047025	3-oxoacyl-[acyl-carrier-protein] reductase (NADH) activity	-	ISO	Function
GO:0047035	testosterone dehydrogenase (NAD+) activity	9712896.	IDA	Function
GO:0051290	protein heterotetramerization	-	ISO	Process
GO:0055114	oxidation-reduction process	-	ISO	Process
GO:0070404	NADH binding	-	ISO	Function