EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000073894 (Gene tree)
Gene ID: 76572
Gene Symbol: Rbmxl2
Alias: 1700012H05Rik
Full Name: RNA binding motif protein%2C X-linked-like 2
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 1472 bases
Position: chr7:107209445-107210916
Accession: 1923822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000095739	RBM1CTR	PF08081.11	1.3e-17	1	1
ENSMUSP00000095739	RRM_1	PF00076.22	2.5e-21	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000098135	-	1472	-	ENSMUSP00000095739	385 (aa)	-	Q9DAE2

Gene Model

Click here to download ENSMUSG00000073894's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000073894's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000073894	Rbmxl2	94	44.063	ENSMUSG00000096520	Gm3376	88	41.551
ENSMUSG00000073894	Rbmxl2	94	69.863	ENSMUSG00000037070	Rbmxl1	100	71.867
ENSMUSG00000073894	Rbmxl2	94	70.109	ENSMUSG00000031134	Rbmx	87	87.778
ENSMUSG00000073894	Rbmxl2	94	70.219	ENSMUSG00000049235	Gm7324	100	71.611
ENSMUSG00000073894	Rbmxl2	94	43.536	ENSMUSG00000091987	Gm10352	88	40.997
ENSMUSG00000073894	Rbmxl2	94	43.008	ENSMUSG00000094511	Gm21693	88	40.443
ENSMUSG00000073894	Rbmxl2	94	43.272	ENSMUSG00000102053	Gm4064	88	40.710
ENSMUSG00000073894	Rbmxl2	94	43.272	ENSMUSG00000093918	Gm21677	88	40.720
ENSMUSG00000073894	Rbmxl2	94	43.272	ENSMUSG00000095948	Gm21708	88	40.720
ENSMUSG00000073894	Rbmxl2	94	43.272	ENSMUSG00000094658	Rbmy	88	40.720
ENSMUSG00000073894	Rbmxl2	94	43.272	ENSMUSG00000093987	Gm21704	88	40.720
ENSMUSG00000073894	Rbmxl2	94	43.536	ENSMUSG00000095852	Gm10256	88	40.997

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000073894	Rbmxl2	95	77.394	ENSG00000170748	RBMXL2	100	77.778	Homo_sapiens
ENSMUSG00000073894	Rbmxl2	97	78.534	ENSBTAG00000047652	RBMXL2	100	82.620	Bos_taurus
ENSMUSG00000073894	Rbmxl2	95	74.603	ENSCJAG00000048010	-	100	74.121	Callithrix_jacchus
ENSMUSG00000073894	Rbmxl2	100	73.183	ENSCAFG00020009888	-	100	74.687	Canis_lupus_dingo
ENSMUSG00000073894	Rbmxl2	97	78.534	ENSCHIG00000005262	-	100	83.081	Capra_hircus
ENSMUSG00000073894	Rbmxl2	95	70.292	ENSCCAG00000030849	-	97	75.824	Cebus_capucinus
ENSMUSG00000073894	Rbmxl2	75	88.000	ENSCLAG00000016880	-	96	88.889	Chinchilla_lanigera
ENSMUSG00000073894	Rbmxl2	94	76.408	ENSCSAG00000019334	RBMXL2	100	77.834	Chlorocebus_sabaeus
ENSMUSG00000073894	Rbmxl2	100	71.357	ENSCSAG00000008478	-	100	72.864	Chlorocebus_sabaeus
ENSMUSG00000073894	Rbmxl2	94	62.745	ENSCANG00000038625	-	66	66.279	Colobus_angolensis_palliatus
ENSMUSG00000073894	Rbmxl2	100	98.705	ENSCGRG00001007681	Rbmxl2	100	98.705	Cricetulus_griseus_chok1gshd
ENSMUSG00000073894	Rbmxl2	100	63.010	ENSDNOG00000011946	-	61	83.684	Dasypus_novemcinctus
ENSMUSG00000073894	Rbmxl2	100	69.192	ENSETEG00000005619	-	100	69.697	Echinops_telfairi
ENSMUSG00000073894	Rbmxl2	100	72.405	ENSFCAG00000042269	-	100	77.722	Felis_catus
ENSMUSG00000073894	Rbmxl2	95	78.457	ENSGGOG00000006168	RBMXL2	100	78.535	Gorilla_gorilla
ENSMUSG00000073894	Rbmxl2	95	71.774	ENSLAFG00000014037	-	100	70.332	Loxodonta_africana
ENSMUSG00000073894	Rbmxl2	94	77.688	ENSMFAG00000037874	RBMXL2	100	78.030	Macaca_fascicularis
ENSMUSG00000073894	Rbmxl2	93	58.462	ENSMFAG00000017591	-	66	61.111	Macaca_fascicularis
ENSMUSG00000073894	Rbmxl2	94	77.273	ENSMMUG00000008588	RBMXL2	100	78.141	Macaca_mulatta
ENSMUSG00000073894	Rbmxl2	94	58.462	ENSMNEG00000026102	-	60	61.111	Macaca_nemestrina
ENSMUSG00000073894	Rbmxl2	94	76.738	ENSMNEG00000004729	RBMXL2	100	78.392	Macaca_nemestrina
ENSMUSG00000073894	Rbmxl2	100	75.194	ENSMAUG00000021353	Rbmxl2	61	80.087	Mesocricetus_auratus
ENSMUSG00000073894	Rbmxl2	100	98.961	MGP_CAROLIEiJ_G0030264	Rbmxl2	100	98.961	Mus_caroli
ENSMUSG00000073894	Rbmxl2	100	98.701	MGP_PahariEiJ_G0013481	Rbmxl2	100	98.701	Mus_pahari
ENSMUSG00000073894	Rbmxl2	100	100.000	MGP_SPRETEiJ_G0031377	Rbmxl2	100	100.000	Mus_spretus
ENSMUSG00000073894	Rbmxl2	72	90.909	ENSMPUG00000010430	-	98	90.909	Mustela_putorius_furo
ENSMUSG00000073894	Rbmxl2	95	77.984	ENSNLEG00000018176	RBMXL2	100	77.834	Nomascus_leucogenys
ENSMUSG00000073894	Rbmxl2	93	76.839	ENSOGAG00000024361	-	100	80.964	Otolemur_garnettii
ENSMUSG00000073894	Rbmxl2	100	57.771	ENSPPAG00000030663	-	58	51.445	Pan_paniscus
ENSMUSG00000073894	Rbmxl2	100	72.911	ENSPPRG00000021361	-	100	78.228	Panthera_pardus
ENSMUSG00000073894	Rbmxl2	95	77.660	ENSPTRG00000003312	RBMXL2	100	78.030	Pan_troglodytes
ENSMUSG00000073894	Rbmxl2	100	58.889	ENSPANG00000017967	-	63	58.889	Papio_anubis
ENSMUSG00000073894	Rbmxl2	94	76.738	ENSPANG00000016324	RBMXL2	100	78.392	Papio_anubis
ENSMUSG00000073894	Rbmxl2	95	72.872	ENSRBIG00000027863	RBMXL2	100	71.574	Rhinopithecus_bieti
ENSMUSG00000073894	Rbmxl2	78	56.347	ENSRROG00000035554	-	63	68.605	Rhinopithecus_roxellana
ENSMUSG00000073894	Rbmxl2	58	80.000	ENSSARG00000012142	-	61	80.000	Sorex_araneus
ENSMUSG00000073894	Rbmxl2	93	62.778	ENSSSCG00000035683	-	100	61.026	Sus_scrofa
ENSMUSG00000073894	Rbmxl2	84	84.874	ENSTTRG00000003238	-	76	88.889	Tursiops_truncatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005681	spliceosomal complex	21873635.	IBA	Component
GO:0048026	positive regulation of mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component