EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000074480 (Gene tree)
Gene ID: 72640
Gene Symbol: Mex3a
Alias: 2700083E18Rik|Rkhd4
Full Name: mex3 RNA binding family member A
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 9002 bases
Position: chr3:88532395-88541396
Accession: 1919890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000134222	KH_1	PF00013.29	2.2e-25	1	2
ENSMUSP00000134222	KH_1	PF00013.29	2.2e-25	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000172699	-	5778	-	ENSMUSP00000134222	520 (aa)	-	G3UYU0

Gene Model

Click here to download ENSMUSG00000074480's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000074480's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000074480	Mex3a	77	50.112	ENSMUSG00000037253	Mex3c	69	49.348

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000074480	Mex3a	100	96.929	ENSG00000254726	MEX3A	100	96.929	Homo_sapiens
ENSMUSG00000074480	Mex3a	100	80.769	ENSAMEG00000014265	MEX3A	100	80.998	Ailuropoda_melanoleuca
ENSMUSG00000074480	Mex3a	71	77.151	ENSAPLG00000009476	MEX3A	99	77.151	Anas_platyrhynchos
ENSMUSG00000074480	Mex3a	73	76.762	ENSACAG00000003739	MEX3A	100	77.604	Anolis_carolinensis
ENSMUSG00000074480	Mex3a	100	93.282	ENSANAG00000032597	MEX3A	100	92.514	Aotus_nancymaae
ENSMUSG00000074480	Mex3a	100	96.545	ENSBTAG00000019158	MEX3A	100	96.545	Bos_taurus
ENSMUSG00000074480	Mex3a	100	96.929	ENSCJAG00000007711	MEX3A	100	96.929	Callithrix_jacchus
ENSMUSG00000074480	Mex3a	66	92.151	ENSCAFG00000024440	MEX3A	100	93.895	Canis_familiaris
ENSMUSG00000074480	Mex3a	100	94.242	ENSCAFG00020006171	MEX3A	100	95.393	Canis_lupus_dingo
ENSMUSG00000074480	Mex3a	100	96.353	ENSCHIG00000012770	MEX3A	100	96.353	Capra_hircus
ENSMUSG00000074480	Mex3a	81	96.682	ENSTSYG00000027006	MEX3A	81	96.682	Carlito_syrichta
ENSMUSG00000074480	Mex3a	71	96.206	ENSCAPG00000011002	MEX3A	86	96.206	Cavia_aperea
ENSMUSG00000074480	Mex3a	100	86.538	ENSCPOG00000020219	MEX3A	100	85.441	Cavia_porcellus
ENSMUSG00000074480	Mex3a	100	97.121	ENSCCAG00000022351	MEX3A	100	97.121	Cebus_capucinus
ENSMUSG00000074480	Mex3a	100	97.121	ENSCATG00000032390	MEX3A	100	97.121	Cercocebus_atys
ENSMUSG00000074480	Mex3a	100	90.211	ENSCLAG00000003842	MEX3A	100	90.211	Chinchilla_lanigera
ENSMUSG00000074480	Mex3a	100	94.434	ENSCSAG00000002097	MEX3A	100	94.434	Chlorocebus_sabaeus
ENSMUSG00000074480	Mex3a	71	79.144	ENSCPBG00000025821	MEX3A	72	79.144	Chrysemys_picta_bellii
ENSMUSG00000074480	Mex3a	88	90.672	ENSCANG00000013320	MEX3A	97	90.672	Colobus_angolensis_palliatus
ENSMUSG00000074480	Mex3a	100	98.269	ENSCGRG00001000412	Mex3a	100	98.269	Cricetulus_griseus_chok1gshd
ENSMUSG00000074480	Mex3a	82	94.419	ENSCGRG00000012989	Mex3a	84	95.519	Cricetulus_griseus_crigri
ENSMUSG00000074480	Mex3a	81	96.437	ENSDORG00000002921	Mex3a	94	96.437	Dipodomys_ordii
ENSMUSG00000074480	Mex3a	100	97.308	ENSEASG00005019131	MEX3A	100	97.308	Equus_asinus_asinus
ENSMUSG00000074480	Mex3a	100	97.115	ENSECAG00000007279	MEX3A	100	97.115	Equus_caballus
ENSMUSG00000074480	Mex3a	53	89.123	ENSEEUG00000009784	MEX3A	100	89.474	Erinaceus_europaeus
ENSMUSG00000074480	Mex3a	100	94.636	ENSFCAG00000044236	MEX3A	100	95.785	Felis_catus
ENSMUSG00000074480	Mex3a	66	79.290	ENSFALG00000014982	MEX3A	100	78.994	Ficedula_albicollis
ENSMUSG00000074480	Mex3a	73	100.000	ENSFDAG00000008485	MEX3A	100	98.413	Fukomys_damarensis
ENSMUSG00000074480	Mex3a	100	74.388	ENSGALG00000014016	MEX3A	100	73.823	Gallus_gallus
ENSMUSG00000074480	Mex3a	100	75.191	ENSGAGG00000020700	MEX3A	100	74.905	Gopherus_agassizii
ENSMUSG00000074480	Mex3a	79	96.368	ENSGGOG00000004513	MEX3A	86	96.368	Gorilla_gorilla
ENSMUSG00000074480	Mex3a	100	88.868	ENSHGLG00000007612	MEX3A	100	88.868	Heterocephalus_glaber_female
ENSMUSG00000074480	Mex3a	100	85.605	ENSHGLG00100013922	MEX3A	100	85.797	Heterocephalus_glaber_male
ENSMUSG00000074480	Mex3a	100	85.988	ENSSTOG00000024275	MEX3A	100	85.988	Ictidomys_tridecemlineatus
ENSMUSG00000074480	Mex3a	86	100.000	ENSJJAG00000020484	Mex3a	98	100.000	Jaculus_jaculus
ENSMUSG00000074480	Mex3a	77	61.275	ENSLACG00000011943	MEX3A	97	74.510	Latimeria_chalumnae
ENSMUSG00000074480	Mex3a	71	92.683	ENSLAFG00000009220	MEX3A	99	92.683	Loxodonta_africana
ENSMUSG00000074480	Mex3a	100	95.393	ENSMFAG00000000628	MEX3A	100	95.393	Macaca_fascicularis
ENSMUSG00000074480	Mex3a	100	93.282	ENSMNEG00000031569	MEX3A	100	93.282	Macaca_nemestrina
ENSMUSG00000074480	Mex3a	81	96.429	ENSMLEG00000023495	MEX3A	92	96.429	Mandrillus_leucophaeus
ENSMUSG00000074480	Mex3a	71	79.144	ENSMGAG00000015563	MEX3A	100	79.144	Meleagris_gallopavo
ENSMUSG00000074480	Mex3a	100	90.385	ENSMAUG00000012601	Mex3a	100	90.962	Mesocricetus_auratus
ENSMUSG00000074480	Mex3a	100	96.929	ENSMICG00000046214	MEX3A	100	96.929	Microcebus_murinus
ENSMUSG00000074480	Mex3a	100	89.443	ENSMOCG00000017881	Mex3a	100	89.443	Microtus_ochrogaster
ENSMUSG00000074480	Mex3a	100	91.461	ENSMODG00000016954	MEX3A	100	96.154	Monodelphis_domestica
ENSMUSG00000074480	Mex3a	100	99.231	MGP_CAROLIEiJ_G0025170	Mex3a	100	99.231	Mus_caroli
ENSMUSG00000074480	Mex3a	100	98.654	MGP_PahariEiJ_G0026615	Mex3a	100	98.654	Mus_pahari
ENSMUSG00000074480	Mex3a	77	92.804	ENSMPUG00000004774	MEX3A	100	94.293	Mustela_putorius_furo
ENSMUSG00000074480	Mex3a	71	92.432	ENSMLUG00000010185	MEX3A	94	93.784	Myotis_lucifugus
ENSMUSG00000074480	Mex3a	100	95.777	ENSNGAG00000019587	Mex3a	100	95.777	Nannospalax_galili
ENSMUSG00000074480	Mex3a	86	96.437	ENSNLEG00000012329	MEX3A	100	96.437	Nomascus_leucogenys
ENSMUSG00000074480	Mex3a	76	91.414	ENSOPRG00000002937	MEX3A	99	91.414	Ochotona_princeps
ENSMUSG00000074480	Mex3a	100	90.787	ENSODEG00000009643	MEX3A	100	90.787	Octodon_degus
ENSMUSG00000074480	Mex3a	100	82.534	ENSOCUG00000005640	MEX3A	100	81.382	Oryctolagus_cuniculus
ENSMUSG00000074480	Mex3a	78	96.040	ENSOGAG00000029891	MEX3A	99	96.040	Otolemur_garnettii
ENSMUSG00000074480	Mex3a	78	86.881	ENSOARG00000005471	MEX3A	95	89.630	Ovis_aries
ENSMUSG00000074480	Mex3a	85	92.325	ENSPPAG00000016303	MEX3A	84	95.704	Pan_paniscus
ENSMUSG00000074480	Mex3a	100	90.805	ENSPPRG00000006585	MEX3A	100	93.678	Panthera_pardus
ENSMUSG00000074480	Mex3a	100	96.929	ENSPTRG00000030373	MEX3A	100	96.929	Pan_troglodytes
ENSMUSG00000074480	Mex3a	81	96.690	ENSPANG00000020303	MEX3A	90	96.682	Papio_anubis
ENSMUSG00000074480	Mex3a	100	89.251	ENSPEMG00000019014	Mex3a	100	89.251	Peromyscus_maniculatus_bairdii
ENSMUSG00000074480	Mex3a	100	91.461	ENSPCIG00000018950	MEX3A	100	92.235	Phascolarctos_cinereus
ENSMUSG00000074480	Mex3a	100	92.898	ENSPCOG00000019307	MEX3A	100	93.090	Propithecus_coquereli
ENSMUSG00000074480	Mex3a	76	93.401	ENSPVAG00000010333	MEX3A	100	93.401	Pteropus_vampyrus
ENSMUSG00000074480	Mex3a	81	97.381	ENSRNOG00000058654	AC119762.3	99	99.017	Rattus_norvegicus
ENSMUSG00000074480	Mex3a	71	96.486	ENSRBIG00000033197	MEX3A	84	96.486	Rhinopithecus_bieti
ENSMUSG00000074480	Mex3a	71	96.486	ENSRROG00000029193	MEX3A	84	96.216	Rhinopithecus_roxellana
ENSMUSG00000074480	Mex3a	100	86.756	ENSSBOG00000025317	MEX3A	100	86.948	Saimiri_boliviensis_boliviensis
ENSMUSG00000074480	Mex3a	71	90.691	ENSSHAG00000013466	MEX3A	100	91.777	Sarcophilus_harrisii
ENSMUSG00000074480	Mex3a	73	94.851	ENSSARG00000009868	MEX3A	100	94.851	Sorex_araneus
ENSMUSG00000074480	Mex3a	71	79.032	ENSSPUG00000002522	MEX3A	92	79.032	Sphenodon_punctatus
ENSMUSG00000074480	Mex3a	100	96.731	ENSSSCG00000006497	MEX3A	100	96.731	Sus_scrofa
ENSMUSG00000074480	Mex3a	71	78.610	ENSTGUG00000003692	MEX3A	98	78.610	Taeniopygia_guttata
ENSMUSG00000074480	Mex3a	76	95.455	ENSTTRG00000013346	MEX3A	86	95.455	Tursiops_truncatus
ENSMUSG00000074480	Mex3a	77	93.766	ENSUAMG00000013807	MEX3A	94	95.262	Ursus_americanus
ENSMUSG00000074480	Mex3a	100	87.146	ENSVVUG00000005834	MEX3A	100	89.036	Vulpes_vulpes
ENSMUSG00000074480	Mex3a	71	73.854	ENSXETG00000012704	mex3a	100	73.190	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005829	cytosol	-	ISO	Component
GO:0008150	biological_process	-	ND	Process